RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 DSCR10P59022 87 aa10.29□□□□□ -0.76
MCF2L-230ENST00000491028 UBR4Q5T4S7 5183 aa10.28□□□□□ -0.76
MCF2L-230ENST00000491028 CXCL6P80162 114 aa10.27□□□□□ -0.77
MCF2L-230ENST00000491028 IGKV3D-7A0A0C4DH55 119 aa10.26□□□□□ -0.77
MCF2L-230ENST00000491028 ATP5EP2Q5VTU8 51 aa10.26□□□□□ -0.77
MCF2L-230ENST00000491028 IGHV6-1A0A0B4J1U7 121 aa10.25□□□□□ -0.77
MCF2L-230ENST00000491028 C8orf87E5RJ46 101 aa10.25□□□□□ -0.77
MCF2L-230ENST00000491028 C9orf92A6NGG3 77 aa10.24□□□□□ -0.77
MCF2L-230ENST00000491028 LINC00643Q86TS7 51 aa10.24□□□□□ -0.77
MCF2L-230ENST00000491028 PRR15Q8IV56 129 aa10.24□□□□□ -0.77
MCF2L-230ENST00000491028 K7EQZ3 153 aa10.23□□□□□ -0.77
MCF2L-230ENST00000491028 LINC00313P59037 77 aa10.22□□□□□ -0.77
MCF2L-230ENST00000491028 CDIP1Q9H305 208 aa10.22□□□□□ -0.77
MCF2L-230ENST00000491028 Q8N9L7 120 aa10.18□□□□□ -0.78
MCF2L-230ENST00000491028 C8orf17Q9NRJ1 99 aa10.18□□□□□ -0.78
MCF2L-230ENST00000491028 XP32Q5T750 250 aa10.17□□□□□ -0.78
MCF2L-230ENST00000491028 NOTCH2NLQ7Z3S9 236 aa10.16□□□□□ -0.78
MCF2L-230ENST00000491028 MMP24-AS1A0A0U1RRL7 71 aa10.14□□□□□ -0.79
MCF2L-230ENST00000491028 LPAP08519 4548 aa10.14□□□□□ -0.79
MCF2L-230ENST00000491028 KRTAP16-1A8MUX0 517 aa10.13□□□□□ -0.79
MCF2L-230ENST00000491028 TMEM254Q8TBM7 123 aa10.09□□□□□ -0.79
MCF2L-230ENST00000491028 C20orf166-AS1Q96NR2 134 aa10.09□□□□□ -0.79
MCF2L-230ENST00000491028 LRP2P98164 4655 aa10.09□□□□□ -0.79
MCF2L-230ENST00000491028 hDV103S1A0JD37 113 aa10.08□□□□□ -0.8
MCF2L-230ENST00000491028 A8MUU9 505 aa10.07□□□□□ -0.8
MCF2L-230ENST00000491028 HCG22E2RYF7 251 aa10.07□□□□□ -0.8
MCF2L-230ENST00000491028 HIST1H4AP62805 103 aaKnown RBP10.07□□□□□ -0.8
MCF2L-230ENST00000491028 Q75L30 129 aa10.07□□□□□ -0.8
MCF2L-230ENST00000491028 RPL37P61927 97 aaKnown RBP10.06□□□□□ -0.8
MCF2L-230ENST00000491028 CASC2Q6XLA1 102 aa10.06□□□□□ -0.8
MCF2L-230ENST00000491028 MRPL34Q9BQ48 92 aaKnown RBP10.06□□□□□ -0.8
MCF2L-230ENST00000491028 WFDC13Q8IUB5 93 aa10.04□□□□□ -0.8
MCF2L-230ENST00000491028 Q8N9P0 234 aaPredicted RBP10.03□□□□□ -0.8
MCF2L-230ENST00000491028 SEC61BP60468 96 aaKnown RBP10□□□□□ -0.81
MCF2L-230ENST00000491028 IMUPQ9GZP8 106 aa10□□□□□ -0.81
MCF2L-230ENST00000491028 MT-ATP8P03928 68 aa9.99□□□□□ -0.81
MCF2L-230ENST00000491028 A0A087WVE0 104 aa9.98□□□□□ -0.81
MCF2L-230ENST00000491028 ATP11AUNQ6ZP68 121 aa9.95□□□□□ -0.82
MCF2L-230ENST00000491028 RNF213Q63HN8 5207 aa9.95□□□□□ -0.82
MCF2L-230ENST00000491028 NDUFS5O43920 106 aa9.93□□□□□ -0.82
MCF2L-230ENST00000491028 PCOTHQ58A44 107 aa9.91□□□□□ -0.82
MCF2L-230ENST00000491028 MUC17Q685J3 4493 aa9.89□□□□□ -0.83
MCF2L-230ENST00000491028 ZCCHC13Q8WW36 166 aaKnown RBP9.88□□□□□ -0.83
MCF2L-230ENST00000491028 TP53AIP1Q9HCN2 124 aa9.87□□□□□ -0.83
MCF2L-230ENST00000491028 FAM236AA0A1B0GUQ0 79 aa9.78□□□□□ -0.84
MCF2L-230ENST00000491028 FAM236BA0A1B0GV22 79 aa9.78□□□□□ -0.84
MCF2L-230ENST00000491028 SCGB1A1P11684 91 aa9.77□□□□□ -0.85
MCF2L-230ENST00000491028 UQCRQO14949 82 aa9.76□□□□□ -0.85
MCF2L-230ENST00000491028 Q5W150 140 aa9.76□□□□□ -0.85
MCF2L-230ENST00000491028 OCR1Q9BZK8 76 aa9.74□□□□□ -0.85
MCF2L-230ENST00000491028 KRTAP4-1Q9BYQ7 146 aa9.73□□□□□ -0.85
MCF2L-230ENST00000491028 TRAV22A0A0B4J277 110 aa9.72□□□□□ -0.85
MCF2L-230ENST00000491028 SMIM20Q8N5G0 67 aa9.7□□□□□ -0.86
MCF2L-230ENST00000491028 ATOX1O00244 68 aa9.68□□□□□ -0.86
MCF2L-230ENST00000491028 SPINK7P58062 85 aa9.66□□□□□ -0.86
MCF2L-230ENST00000491028 C7orf65Q6ZTY9 151 aa9.65□□□□□ -0.86
MCF2L-230ENST00000491028 H0Y9P7 68 aa9.64□□□□□ -0.87
MCF2L-230ENST00000491028 IGKV2-30P06310 120 aa9.63□□□□□ -0.87
MCF2L-230ENST00000491028 IGKV2D-30A0A075B6S6 120 aa9.62□□□□□ -0.87
MCF2L-230ENST00000491028 TRAV7A0A075B6U4 112 aa9.62□□□□□ -0.87
MCF2L-230ENST00000491028 C5orf47Q569G3 176 aa9.62□□□□□ -0.87
MCF2L-230ENST00000491028 LOC101927531A0A1B0GV80 90 aa9.6□□□□□ -0.87
MCF2L-230ENST00000491028 MP68P56378 58 aa9.6□□□□□ -0.87
MCF2L-230ENST00000491028 MUC2Q02817 5179 aa9.58□□□□□ -0.88
MCF2L-230ENST00000491028 H3BPC8 53 aa9.57□□□□□ -0.88
MCF2L-230ENST00000491028 HRES1P13985 223 aa9.56□□□□□ -0.88
MCF2L-230ENST00000491028 LINC00208Q96KT6 92 aa9.54□□□□□ -0.88
MCF2L-230ENST00000491028 SERP2Q8N6R1 65 aa9.53□□□□□ -0.88
MCF2L-230ENST00000491028 C1orf64Q8NEQ6 169 aa9.53□□□□□ -0.88
MCF2L-230ENST00000491028 CYP4F30PQ9H0H9 118 aa9.52□□□□□ -0.89
MCF2L-230ENST00000491028 MPLKIPQ8TAP9 179 aa9.51□□□□□ -0.89
MCF2L-230ENST00000491028 A0A0U1RQV1 116 aa9.5□□□□□ -0.89
MCF2L-230ENST00000491028 RBM12B-AS1Q9P1G2 102 aa9.5□□□□□ -0.89
MCF2L-230ENST00000491028 KRTAP19-2Q3LHN2 52 aa9.44□□□□□ -0.9
MCF2L-230ENST00000491028 COX6B2Q6YFQ2 88 aa9.42□□□□□ -0.9
MCF2L-230ENST00000491028 ANAPC13Q9BS18 74 aa9.42□□□□□ -0.9
MCF2L-230ENST00000491028 FAM236DA0A1B0GTK5 79 aa9.41□□□□□ -0.9
MCF2L-230ENST00000491028 FAM236CP0DP71 79 aa9.41□□□□□ -0.9
MCF2L-230ENST00000491028 COX7CP15954 63 aa9.41□□□□□ -0.9
MCF2L-230ENST00000491028 KRTAP9-2Q9BYQ4 174 aa9.39□□□□□ -0.91
MCF2L-230ENST00000491028 C4orf26Q17RF5 130 aa9.38□□□□□ -0.91
MCF2L-230ENST00000491028 C20orf197Q8N268 126 aa9.38□□□□□ -0.91
MCF2L-230ENST00000491028 KLKP1Q107X0 134 aa9.37□□□□□ -0.91
MCF2L-230ENST00000491028 LCE2CQ5TA81 110 aa9.36□□□□□ -0.91
MCF2L-230ENST00000491028 FAT4Q6V0I7 4981 aa9.35□□□□□ -0.91
MCF2L-230ENST00000491028 SNURFQ9Y675 71 aa9.33□□□□□ -0.92
MCF2L-230ENST00000491028 LCE2AQ5TA79 106 aaPredicted RBP9.29□□□□□ -0.92
MCF2L-230ENST00000491028 H1FX-AS1Q4G0G2 97 aa9.26□□□□□ -0.93
MCF2L-230ENST00000491028 KRTAP3-1Q9BYR8 98 aa9.24□□□□□ -0.93
MCF2L-230ENST00000491028 A8MUN3 132 aa9.22□□□□□ -0.93
MCF2L-230ENST00000491028 MT1HP80294 61 aa9.22□□□□□ -0.93
MCF2L-230ENST00000491028 NDUFC1O43677 76 aa9.21□□□□□ -0.94
MCF2L-230ENST00000491028 KRTAP9-6A0A140TA67 174 aa9.19□□□□□ -0.94
MCF2L-230ENST00000491028 CCDC179H3BU77 68 aa9.17□□□□□ -0.94
MCF2L-230ENST00000491028 SPANXA2-OT1Q8N9U9 137 aa9.17□□□□□ -0.94
MCF2L-230ENST00000491028 FLGP20930 4061 aaPredicted RBP9.15□□□□□ -0.94
MCF2L-230ENST00000491028 DMAC1Q96GE9 116 aa9.15□□□□□ -0.94
MCF2L-230ENST00000491028 H7BZZ5 65 aa9.13□□□□□ -0.95
MCF2L-230ENST00000491028 CYSTM1Q9H1C7 97 aa9.13□□□□□ -0.95
MCF2L-230ENST00000491028 M0R2T5 61 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms