RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 IGLV5-48A0A075B6I7 105 aa-1□□□□□ -2.57
CD46-216ENST00000490278 MT1HL1P0DM35 61 aa-1□□□□□ -2.57
CD46-216ENST00000490278 RBP2P50120 134 aa-1□□□□□ -2.57
CD46-216ENST00000490278 SARNPP82979 210 aaKnown RBP-1□□□□□ -2.57
CD46-216ENST00000490278 WT1-ASQ06250 92 aa-1□□□□□ -2.57
CD46-216ENST00000490278 CFAP54Q96N23 3096 aa-1□□□□□ -2.57
CD46-216ENST00000490278 TMEM131LA2VDJ0 1609 aa-1□□□□□ -2.57
CD46-216ENST00000490278 RICTORQ6R327 1708 aa-1.01□□□□□ -2.57
CD46-216ENST00000490278 ITPR2Q14571 2701 aa-1.01□□□□□ -2.57
CD46-216ENST00000490278 PRUNE2Q8WUY3 3088 aa-1.01□□□□□ -2.57
CD46-216ENST00000490278 FREM2Q5SZK8 3169 aa-1.01□□□□□ -2.57
CD46-216ENST00000490278 LCE6AA0A183 80 aa-1.01□□□□□ -2.57
CD46-216ENST00000490278 NDUFB1O75438 58 aa-1.01□□□□□ -2.57
CD46-216ENST00000490278 MT1EP04732 61 aa-1.01□□□□□ -2.57
CD46-216ENST00000490278 S100PP25815 95 aa-1.01□□□□□ -2.57
CD46-216ENST00000490278 NREPQ16612 68 aa-1.01□□□□□ -2.57
CD46-216ENST00000490278 LY75O60449 1722 aa-1.01□□□□□ -2.57
CD46-216ENST00000490278 M0R143 59 aa-1.02□□□□□ -2.57
CD46-216ENST00000490278 FANCAO15360 1455 aa-1.02□□□□□ -2.57
CD46-216ENST00000490278 EPRSP07814 1512 aaKnown RBP-1.02□□□□□ -2.57
CD46-216ENST00000490278 FCER1GP30273 86 aa-1.02□□□□□ -2.57
CD46-216ENST00000490278 RPS27P42677 84 aaKnown RBP-1.02□□□□□ -2.57
CD46-216ENST00000490278 CRIP1P50238 77 aa-1.02□□□□□ -2.57
CD46-216ENST00000490278 MINOS1Q5TGZ0 78 aa-1.02□□□□□ -2.57
CD46-216ENST00000490278 CRYBG3Q68DQ2 2970 aa-1.02□□□□□ -2.57
CD46-216ENST00000490278 CDC42BPGQ6DT37 1551 aa-1.02□□□□□ -2.57
CD46-216ENST00000490278 RPS27LQ71UM5 84 aaKnown RBP-1.02□□□□□ -2.57
CD46-216ENST00000490278 ITSN1Q15811 1721 aa-1.03□□□□□ -2.57
CD46-216ENST00000490278 DIP2BQ9P265 1576 aa-1.03□□□□□ -2.57
CD46-216ENST00000490278 ABCC10Q5T3U5 1492 aa-1.03□□□□□ -2.57
CD46-216ENST00000490278 A0A087WXM4 84 aa-1.03□□□□□ -2.57
CD46-216ENST00000490278 GYPAP02724 150 aa-1.03□□□□□ -2.57
CD46-216ENST00000490278 KRTAP8-1Q8IUC2 63 aa-1.03□□□□□ -2.57
CD46-216ENST00000490278 ACBD7Q8N6N7 88 aa-1.03□□□□□ -2.57
CD46-216ENST00000490278 MT1LQ93083 61 aa-1.03□□□□□ -2.57
CD46-216ENST00000490278 TCEAL7Q9BRU2 100 aa-1.03□□□□□ -2.57
CD46-216ENST00000490278 SNHG12Q9BXW3 62 aa-1.03□□□□□ -2.57
CD46-216ENST00000490278 ITSN2Q9NZM3 1697 aa-1.04□□□□□ -2.58
CD46-216ENST00000490278 PIK3C2BO00750 1634 aa-1.04□□□□□ -2.58
CD46-216ENST00000490278 S100A16Q96FQ6 103 aaKnown RBP-1.04□□□□□ -2.58
CD46-216ENST00000490278 TJP1Q07157 1748 aa-1.04□□□□□ -2.58
CD46-216ENST00000490278 KIF1AQ12756 1690 aa-1.04□□□□□ -2.58
CD46-216ENST00000490278 ZFHX4Q86UP3 3567 aa-1.04□□□□□ -2.58
CD46-216ENST00000490278 URB2Q14146 1524 aaKnown RBP-1.05□□□□□ -2.58
CD46-216ENST00000490278 KIAA0586Q9BVV6 1533 aa-1.05□□□□□ -2.58
CD46-216ENST00000490278 MYO15AQ9UKN7 3530 aa-1.05□□□□□ -2.58
CD46-216ENST00000490278 AKAP12Q02952 1782 aa-1.05□□□□□ -2.58
CD46-216ENST00000490278 ANKRD26Q9UPS8 1709 aa-1.05□□□□□ -2.58
CD46-216ENST00000490278 SNRPFP62306 86 aaKnown RBP-1.05□□□□□ -2.58
CD46-216ENST00000490278 LINC00643Q86TS7 51 aa-1.05□□□□□ -2.58
CD46-216ENST00000490278 VPS13CQ709C8 3753 aa-1.05□□□□□ -2.58
CD46-216ENST00000490278 CEP162Q5TB80 1403 aa-1.06□□□□□ -2.58
CD46-216ENST00000490278 DEFB4AO15263 64 aa-1.06□□□□□ -2.58
CD46-216ENST00000490278 SMIM13P0DJ93 91 aa-1.06□□□□□ -2.58
CD46-216ENST00000490278 RABAC1Q9UI14 185 aa-1.06□□□□□ -2.58
CD46-216ENST00000490278 NRAPQ86VF7 1730 aa-1.06□□□□□ -2.58
CD46-216ENST00000490278 MAST1Q9Y2H9 1570 aa-1.07□□□□□ -2.58
CD46-216ENST00000490278 DEFB131BA0A096LNP1 70 aa-1.07□□□□□ -2.58
CD46-216ENST00000490278 Q9H521 79 aa-1.07□□□□□ -2.58
CD46-216ENST00000490278 ZC3H13Q5T200 1668 aaKnown RBP-1.07□□□□□ -2.58
CD46-216ENST00000490278 PPLO60437 1756 aa-1.08□□□□□ -2.58
CD46-216ENST00000490278 UBL5Q9BZL1 73 aa-1.08□□□□□ -2.58
CD46-216ENST00000490278 C6orf48Q9UBA6 75 aa-1.08□□□□□ -2.58
CD46-216ENST00000490278 ARHGAP35Q9NRY4 1499 aa-1.08□□□□□ -2.58
CD46-216ENST00000490278 CFAP43Q8NDM7 1665 aa-1.09□□□□□ -2.58
CD46-216ENST00000490278 PVALEFA0A1B0GWK0 134 aa-1.09□□□□□ -2.58
CD46-216ENST00000490278 LINC01546A6NGU7 62 aa-1.09□□□□□ -2.58
CD46-216ENST00000490278 MRPL33O75394 65 aaKnown RBP-1.09□□□□□ -2.58
CD46-216ENST00000490278 MT2AP02795 61 aa-1.09□□□□□ -2.58
CD46-216ENST00000490278 PKIAP61925 76 aa-1.09□□□□□ -2.58
CD46-216ENST00000490278 ENHOQ6UWT2 76 aa-1.09□□□□□ -2.58
CD46-216ENST00000490278 MT1MQ8N339 61 aa-1.09□□□□□ -2.58
CD46-216ENST00000490278 NOP10Q9NPE3 64 aaKnown RBP-1.09□□□□□ -2.58
CD46-216ENST00000490278 SPEGQ15772 3267 aa-1.09□□□□□ -2.58
CD46-216ENST00000490278 KIF14Q15058 1648 aa-1.09□□□□□ -2.58
CD46-216ENST00000490278 HFM1A2PYH4 1435 aa-1.09□□□□□ -2.58
CD46-216ENST00000490278 LRRIQ1Q96JM4 1722 aa-1.09□□□□□ -2.58
CD46-216ENST00000490278 ERVK-7P63135 1459 aa-1.1□□□□□ -2.59
CD46-216ENST00000490278 H3BUA1 57 aa-1.1□□□□□ -2.59
CD46-216ENST00000490278 SPART-AS1P0CW21 52 aa-1.1□□□□□ -2.59
CD46-216ENST00000490278 TDRG1Q3Y452 100 aa-1.1□□□□□ -2.59
CD46-216ENST00000490278 BVES-AS1Q5T3Y7 98 aa-1.1□□□□□ -2.59
CD46-216ENST00000490278 WDFY3Q8IZQ1 3526 aa-1.1□□□□□ -2.59
CD46-216ENST00000490278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.1□□□□□ -2.59
CD46-216ENST00000490278 A0A1B0GUL6 1792 aa-1.11□□□□□ -2.59
CD46-216ENST00000490278 A8MTW9 85 aa-1.11□□□□□ -2.59
CD46-216ENST00000490278 H3BVH4 76 aa-1.11□□□□□ -2.59
CD46-216ENST00000490278 M0QY20 66 aa-1.11□□□□□ -2.59
CD46-216ENST00000490278 PYY3Q5JQD4 70 aa-1.11□□□□□ -2.59
CD46-216ENST00000490278 KCNQ1DNQ9H478 68 aa-1.11□□□□□ -2.59
CD46-216ENST00000490278 ETDCA0A1B0GVM5 59 aa-1.12□□□□□ -2.59
CD46-216ENST00000490278 ATP5EP2Q5VTU8 51 aa-1.12□□□□□ -2.59
CD46-216ENST00000490278 ASXL1Q8IXJ9 1541 aa-1.12□□□□□ -2.59
CD46-216ENST00000490278 MAP3K4Q9Y6R4 1608 aa-1.13□□□□□ -2.59
CD46-216ENST00000490278 KANTRA0A1W2PQU2 76 aa-1.13□□□□□ -2.59
CD46-216ENST00000490278 H3BUT2 72 aa-1.13□□□□□ -2.59
CD46-216ENST00000490278 HMGA1P17096 107 aaKnown RBP-1.13□□□□□ -2.59
CD46-216ENST00000490278 KAAG1Q9UBP8 84 aa-1.13□□□□□ -2.59
CD46-216ENST00000490278 CCDC88BA6NC98 1476 aa-1.13□□□□□ -2.59
CD46-216ENST00000490278 KDM5DQ9BY66 1539 aa-1.14□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms