RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 FAM236DA0A1B0GTK5 79 aa4.29□□□□□ -1.72
PRKCB-208ENST00000487674 A0A1B0GX51 115 aa4.29□□□□□ -1.72
PRKCB-208ENST00000487674 MT2AP02795 61 aa4.29□□□□□ -1.72
PRKCB-208ENST00000487674 FAM236CP0DP71 79 aa4.29□□□□□ -1.72
PRKCB-208ENST00000487674 UQCR10Q9UDW1 63 aa4.29□□□□□ -1.72
PRKCB-208ENST00000487674 FABP2P12104 132 aa4.28□□□□□ -1.72
PRKCB-208ENST00000487674 HIGD1BQ9P298 99 aa4.28□□□□□ -1.72
PRKCB-208ENST00000487674 A0A1W2PNM2 257 aa4.27□□□□□ -1.73
PRKCB-208ENST00000487674 KRTAP16-1A8MUX0 517 aa4.27□□□□□ -1.73
PRKCB-208ENST00000487674 LINC00313P59037 77 aa4.27□□□□□ -1.73
PRKCB-208ENST00000487674 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.27□□□□□ -1.73
PRKCB-208ENST00000487674 IGKV4-1P06312 121 aa4.26□□□□□ -1.73
PRKCB-208ENST00000487674 MPLKIPQ8TAP9 179 aa4.26□□□□□ -1.73
PRKCB-208ENST00000487674 RBM12B-AS1Q9P1G2 102 aa4.26□□□□□ -1.73
PRKCB-208ENST00000487674 TRBV7-4A0A0J9YYF1 115 aa4.25□□□□□ -1.73
PRKCB-208ENST00000487674 MT1FP04733 61 aa4.25□□□□□ -1.73
PRKCB-208ENST00000487674 HRES1P13985 223 aa4.25□□□□□ -1.73
PRKCB-208ENST00000487674 PRO1854Q9UHT4 67 aa4.25□□□□□ -1.73
PRKCB-208ENST00000487674 ANKRD29Q8N6D5 301 aa4.24□□□□□ -1.73
PRKCB-208ENST00000487674 DNAL4O96015 105 aa4.23□□□□□ -1.73
PRKCB-208ENST00000487674 CEND1Q8N111 149 aa4.23□□□□□ -1.73
PRKCB-208ENST00000487674 FCGBPQ9Y6R7 5405 aaPredicted RBP4.23□□□□□ -1.73
PRKCB-208ENST00000487674 H3BQ85 93 aa4.22□□□□□ -1.73
PRKCB-208ENST00000487674 KRTAP10-10P60014 251 aa4.22□□□□□ -1.73
PRKCB-208ENST00000487674 KRTAP10-7P60409 375 aaPredicted RBP4.22□□□□□ -1.73
PRKCB-208ENST00000487674 NOTCH2NLQ7Z3S9 236 aa4.22□□□□□ -1.73
PRKCB-208ENST00000487674 LINC00472Q9H8W2 130 aa4.22□□□□□ -1.73
PRKCB-208ENST00000487674 ORMDL1Q9P0S3 153 aa4.22□□□□□ -1.73
PRKCB-208ENST00000487674 IGHV6-1A0A0B4J1U7 121 aa4.21□□□□□ -1.74
PRKCB-208ENST00000487674 A0A1B0GV72 72 aa4.21□□□□□ -1.74
PRKCB-208ENST00000487674 TRACP01848 142 aa4.21□□□□□ -1.74
PRKCB-208ENST00000487674 FXYD2P54710 66 aa4.21□□□□□ -1.74
PRKCB-208ENST00000487674 HSD52Q0P140 79 aa4.21□□□□□ -1.74
PRKCB-208ENST00000487674 DEFB116Q30KQ4 102 aa4.21□□□□□ -1.74
PRKCB-208ENST00000487674 KRTAP5-11Q6L8G4 156 aa4.21□□□□□ -1.74
PRKCB-208ENST00000487674 M0R143 59 aa4.2□□□□□ -1.74
PRKCB-208ENST00000487674 CCKP06307 115 aa4.2□□□□□ -1.74
PRKCB-208ENST00000487674 C8orf87E5RJ46 101 aa4.19□□□□□ -1.74
PRKCB-208ENST00000487674 TMEM256-PLSCR3K7ERE1 68 aa4.19□□□□□ -1.74
PRKCB-208ENST00000487674 MTURNQ8N3F0 131 aa4.19□□□□□ -1.74
PRKCB-208ENST00000487674 A0A1B0GVX0 72 aa4.18□□□□□ -1.74
PRKCB-208ENST00000487674 TAX1BP3O14907 124 aa4.17□□□□□ -1.74
PRKCB-208ENST00000487674 PSMB2P49721 201 aa4.17□□□□□ -1.74
PRKCB-208ENST00000487674 UBE2V1Q13404 147 aa4.17□□□□□ -1.74
PRKCB-208ENST00000487674 ZCCHC13Q8WW36 166 aaKnown RBP4.17□□□□□ -1.74
PRKCB-208ENST00000487674 K7ERJ3 54 aa4.16□□□□□ -1.74
PRKCB-208ENST00000487674 COX6CP09669 75 aa4.16□□□□□ -1.74
PRKCB-208ENST00000487674 Q8N9P0 234 aaPredicted RBP4.16□□□□□ -1.74
PRKCB-208ENST00000487674 SPINK7P58062 85 aa4.15□□□□□ -1.75
PRKCB-208ENST00000487674 BATFQ16520 125 aa4.15□□□□□ -1.75
PRKCB-208ENST00000487674 VPS25Q9BRG1 176 aa4.15□□□□□ -1.75
PRKCB-208ENST00000487674 J3KT08 172 aa4.14□□□□□ -1.75
PRKCB-208ENST00000487674 COL5A1-AS1Q5SY13 56 aa4.14□□□□□ -1.75
PRKCB-208ENST00000487674 LINC00846Q9NV44 126 aa4.14□□□□□ -1.75
PRKCB-208ENST00000487674 MACF1Q9UPN3 7388 aaKnown RBP4.13□□□□□ -1.75
PRKCB-208ENST00000487674 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
PRKCB-208ENST00000487674 A0A1B0GV90 55 aa4.13□□□□□ -1.75
PRKCB-208ENST00000487674 IGKV2-30P06310 120 aa4.13□□□□□ -1.75
PRKCB-208ENST00000487674 RBM3P98179 157 aaKnown RBP4.13□□□□□ -1.75
PRKCB-208ENST00000487674 DSCR8Q96T75 97 aa4.13□□□□□ -1.75
PRKCB-208ENST00000487674 A8MWP4 228 aa4.12□□□□□ -1.75
PRKCB-208ENST00000487674 KRTAP19-6Q3LI70 58 aa4.12□□□□□ -1.75
PRKCB-208ENST00000487674 WFDC13Q8IUB5 93 aa4.11□□□□□ -1.75
PRKCB-208ENST00000487674 NDUFB1O75438 58 aa4.1□□□□□ -1.75
PRKCB-208ENST00000487674 Q6ZQT0 140 aa4.1□□□□□ -1.75
PRKCB-208ENST00000487674 NAA38Q9BRA0 125 aaKnown RBP4.1□□□□□ -1.75
PRKCB-208ENST00000487674 C9JAW5 83 aa4.09□□□□□ -1.75
PRKCB-208ENST00000487674 A0A1W2PPM0 123 aa4.08□□□□□ -1.76
PRKCB-208ENST00000487674 SCGB1C2P0DMR2 95 aa4.08□□□□□ -1.76
PRKCB-208ENST00000487674 C8orf17Q9NRJ1 99 aa4.08□□□□□ -1.76
PRKCB-208ENST00000487674 LYRM7Q5U5X0 104 aa4.07□□□□□ -1.76
PRKCB-208ENST00000487674 A0A1B0GW54 56 aa4.06□□□□□ -1.76
PRKCB-208ENST00000487674 BAALC-AS2P0C853 105 aa4.06□□□□□ -1.76
PRKCB-208ENST00000487674 IGKV3D-7A0A0C4DH55 119 aa4.05□□□□□ -1.76
PRKCB-208ENST00000487674 K7EP34 96 aa4.05□□□□□ -1.76
PRKCB-208ENST00000487674 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
PRKCB-208ENST00000487674 LOC110117498A0A087WWA1 95 aa4.04□□□□□ -1.76
PRKCB-208ENST00000487674 JMJD7-PLA2G4BH0Y9G9 81 aa4.04□□□□□ -1.76
PRKCB-208ENST00000487674 Q6ZVQ6 151 aa4.04□□□□□ -1.76
PRKCB-208ENST00000487674 PRO0461Q9UI25 63 aa4.04□□□□□ -1.76
PRKCB-208ENST00000487674 PDE6GP18545 87 aa4.02□□□□□ -1.77
PRKCB-208ENST00000487674 H1FX-AS1Q4G0G2 97 aa4.02□□□□□ -1.77
PRKCB-208ENST00000487674 PRR15Q8IV56 129 aa4.02□□□□□ -1.77
PRKCB-208ENST00000487674 SPCS1Q9Y6A9 102 aa4.02□□□□□ -1.77
PRKCB-208ENST00000487674 ATXN8Q156A1 80 aa4.01□□□□□ -1.77
PRKCB-208ENST00000487674 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
PRKCB-208ENST00000487674 TMEM254Q8TBM7 123 aa4.01□□□□□ -1.77
PRKCB-208ENST00000487674 MMP24-AS1A0A0U1RRL7 71 aa4□□□□□ -1.77
PRKCB-208ENST00000487674 MRPL34Q9BQ48 92 aaKnown RBP4□□□□□ -1.77
PRKCB-208ENST00000487674 C14orf132Q9NPU4 83 aa3.99□□□□□ -1.77
PRKCB-208ENST00000487674 NREPQ16612 68 aa3.98□□□□□ -1.77
PRKCB-208ENST00000487674 hDV103S1A0JD37 113 aa3.97□□□□□ -1.77
PRKCB-208ENST00000487674 NDUFS5O43920 106 aa3.97□□□□□ -1.77
PRKCB-208ENST00000487674 K7EQZ3 153 aa3.96□□□□□ -1.78
PRKCB-208ENST00000487674 C7orf65Q6ZTY9 151 aa3.96□□□□□ -1.78
PRKCB-208ENST00000487674 GTF2H5Q6ZYL4 71 aa3.96□□□□□ -1.78
PRKCB-208ENST00000487674 IGKV2D-30A0A075B6S6 120 aa3.95□□□□□ -1.78
PRKCB-208ENST00000487674 NEBP20929 6669 aa3.93□□□□□ -1.78
PRKCB-208ENST00000487674 F8W1H4 67 aa3.93□□□□□ -1.78
PRKCB-208ENST00000487674 H3BT86 120 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms