RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	TRIAP1	O43715	76 aa		5.37	□□□□□ -1.55
HMGN1-215	ENST00000485550	KRTAP15-1	Q3LI76	137 aa		5.37	□□□□□ -1.55
HMGN1-215	ENST00000485550	KRTAP16-1	A8MUX0	517 aa		5.36	□□□□□ -1.55
HMGN1-215	ENST00000485550	IGKV4-1	P06312	121 aa		5.36	□□□□□ -1.55
HMGN1-215	ENST00000485550	LINC00313	P59037	77 aa		5.36	□□□□□ -1.55
HMGN1-215	ENST00000485550	DEFB116	Q30KQ4	102 aa		5.36	□□□□□ -1.55
HMGN1-215	ENST00000485550	ANKRD29	Q8N6D5	301 aa		5.36	□□□□□ -1.55
HMGN1-215	ENST00000485550	MACF1	Q9UPN3	7388 aa	Known RBP	5.35	□□□□□ -1.55
HMGN1-215	ENST00000485550	SYNE2	Q8WXH0	6885 aa	Known RBP	5.35	□□□□□ -1.55
HMGN1-215	ENST00000485550	NOTCH2NL	Q7Z3S9	236 aa		5.34	□□□□□ -1.55
HMGN1-215	ENST00000485550	FAM236D	A0A1B0GTK5	79 aa		5.33	□□□□□ -1.56
HMGN1-215	ENST00000485550	DNAL4	O96015	105 aa		5.33	□□□□□ -1.56
HMGN1-215	ENST00000485550	MT2A	P02795	61 aa		5.33	□□□□□ -1.56
HMGN1-215	ENST00000485550	FAM236C	P0DP71	79 aa		5.33	□□□□□ -1.56
HMGN1-215	ENST00000485550	PSMB2	P49721	201 aa		5.33	□□□□□ -1.56
HMGN1-215	ENST00000485550	ORMDL1	Q9P0S3	153 aa		5.33	□□□□□ -1.56
HMGN1-215	ENST00000485550	TRBV7-4	A0A0J9YYF1	115 aa		5.32	□□□□□ -1.56
HMGN1-215	ENST00000485550		K7ERJ3	54 aa		5.32	□□□□□ -1.56
HMGN1-215	ENST00000485550	IGHV6-1	A0A0B4J1U7	121 aa		5.31	□□□□□ -1.56
HMGN1-215	ENST00000485550	MT1F	P04733	61 aa		5.3	□□□□□ -1.56
HMGN1-215	ENST00000485550	CCK	P06307	115 aa		5.3	□□□□□ -1.56
HMGN1-215	ENST00000485550	TMEM256-PLSCR3	K7ERE1	68 aa		5.29	□□□□□ -1.56
HMGN1-215	ENST00000485550	TRAC	P01848	142 aa		5.29	□□□□□ -1.56
HMGN1-215	ENST00000485550	LINC00472	Q9H8W2	130 aa		5.29	□□□□□ -1.56
HMGN1-215	ENST00000485550	COX6C	P09669	75 aa		5.28	□□□□□ -1.56
HMGN1-215	ENST00000485550	HSD52	Q0P140	79 aa		5.28	□□□□□ -1.56
HMGN1-215	ENST00000485550	VPS25	Q9BRG1	176 aa		5.28	□□□□□ -1.56
HMGN1-215	ENST00000485550		H3BQ85	93 aa		5.27	□□□□□ -1.57
HMGN1-215	ENST00000485550	HRES1	P13985	223 aa		5.27	□□□□□ -1.57
HMGN1-215	ENST00000485550	PYY3	Q5JQD4	70 aa		5.27	□□□□□ -1.57
HMGN1-215	ENST00000485550	KRTAP10-10	P60014	251 aa		5.26	□□□□□ -1.57
HMGN1-215	ENST00000485550	RBM12B-AS1	Q9P1G2	102 aa		5.26	□□□□□ -1.57
HMGN1-215	ENST00000485550	UBE2V1	Q13404	147 aa		5.25	□□□□□ -1.57
HMGN1-215	ENST00000485550	SCGB1C2	P0DMR2	95 aa		5.24	□□□□□ -1.57
HMGN1-215	ENST00000485550	KRTAP6-3	Q3LI67	103 aa		5.24	□□□□□ -1.57
HMGN1-215	ENST00000485550	MPLKIP	Q8TAP9	179 aa		5.24	□□□□□ -1.57
HMGN1-215	ENST00000485550	LINC00846	Q9NV44	126 aa		5.24	□□□□□ -1.57
HMGN1-215	ENST00000485550		A0A1B0GVX0	72 aa		5.23	□□□□□ -1.57
HMGN1-215	ENST00000485550	RBM3	P98179	157 aa	Known RBP	5.23	□□□□□ -1.57
HMGN1-215	ENST00000485550	KRTAP19-6	Q3LI70	58 aa		5.22	□□□□□ -1.57
HMGN1-215	ENST00000485550	DSCR8	Q96T75	97 aa		5.22	□□□□□ -1.57
HMGN1-215	ENST00000485550	C8orf87	E5RJ46	101 aa		5.21	□□□□□ -1.58
HMGN1-215	ENST00000485550	BAALC-AS2	P0C853	105 aa		5.2	□□□□□ -1.58
HMGN1-215	ENST00000485550	UQCR10	Q9UDW1	63 aa		5.2	□□□□□ -1.58
HMGN1-215	ENST00000485550	ZCCHC13	Q8WW36	166 aa	Known RBP	5.19	□□□□□ -1.58
HMGN1-215	ENST00000485550		C9JAW5	83 aa		5.18	□□□□□ -1.58
HMGN1-215	ENST00000485550	SPINK7	P58062	85 aa		5.18	□□□□□ -1.58
HMGN1-215	ENST00000485550	MTURN	Q8N3F0	131 aa		5.17	□□□□□ -1.58
HMGN1-215	ENST00000485550		J3KT08	172 aa		5.16	□□□□□ -1.58
HMGN1-215	ENST00000485550		Q6ZQT0	140 aa		5.16	□□□□□ -1.58
HMGN1-215	ENST00000485550	NDUFB1	O75438	58 aa		5.15	□□□□□ -1.59
HMGN1-215	ENST00000485550	LYRM7	Q5U5X0	104 aa		5.14	□□□□□ -1.59
HMGN1-215	ENST00000485550	NAA38	Q9BRA0	125 aa	Known RBP	5.14	□□□□□ -1.59
HMGN1-215	ENST00000485550		Q8N9P0	234 aa	Predicted RBP	5.13	□□□□□ -1.59
HMGN1-215	ENST00000485550	C8orf17	Q9NRJ1	99 aa		5.13	□□□□□ -1.59
HMGN1-215	ENST00000485550	WFDC13	Q8IUB5	93 aa		5.12	□□□□□ -1.59
HMGN1-215	ENST00000485550	IGKV3D-7	A0A0C4DH55	119 aa		5.11	□□□□□ -1.59
HMGN1-215	ENST00000485550		A8MWP4	228 aa		5.1	□□□□□ -1.59
HMGN1-215	ENST00000485550	ATXN8	Q156A1	80 aa		5.1	□□□□□ -1.59
HMGN1-215	ENST00000485550	JMJD7-PLA2G4B	H0Y9G9	81 aa		5.09	□□□□□ -1.59
HMGN1-215	ENST00000485550	C14orf132	Q9NPU4	83 aa		5.09	□□□□□ -1.59
HMGN1-215	ENST00000485550	KRTAP20-1	Q3LI63	56 aa		5.08	□□□□□ -1.6
HMGN1-215	ENST00000485550		Q6ZVQ6	151 aa		5.08	□□□□□ -1.6
HMGN1-215	ENST00000485550	LOC110117498	A0A087WWA1	95 aa		5.07	□□□□□ -1.6
HMGN1-215	ENST00000485550	NREP	Q16612	68 aa		5.06	□□□□□ -1.6
HMGN1-215	ENST00000485550	PRR15	Q8IV56	129 aa		5.06	□□□□□ -1.6
HMGN1-215	ENST00000485550		A0A1B0GW54	56 aa		5.05	□□□□□ -1.6
HMGN1-215	ENST00000485550		M0R143	59 aa		5.05	□□□□□ -1.6
HMGN1-215	ENST00000485550	PDE6G	P18545	87 aa		5.05	□□□□□ -1.6
HMGN1-215	ENST00000485550	MMP24-AS1	A0A0U1RRL7	71 aa		5.03	□□□□□ -1.6
HMGN1-215	ENST00000485550	NDUFS5	O43920	106 aa		5.03	□□□□□ -1.6
HMGN1-215	ENST00000485550	MRPL34	Q9BQ48	92 aa	Known RBP	5.03	□□□□□ -1.6
HMGN1-215	ENST00000485550	NEB	P20929	6669 aa		5.03	□□□□□ -1.6
HMGN1-215	ENST00000485550	TMEM254	Q8TBM7	123 aa		5.02	□□□□□ -1.61
HMGN1-215	ENST00000485550	hDV103S1	A0JD37	113 aa		5	□□□□□ -1.61
HMGN1-215	ENST00000485550		K7EQZ3	153 aa		5	□□□□□ -1.61
HMGN1-215	ENST00000485550	MUC12	Q9UKN1	5478 aa		5	□□□□□ -1.61
HMGN1-215	ENST00000485550	BATF	Q16520	125 aa		4.99	□□□□□ -1.61
HMGN1-215	ENST00000485550	H1FX-AS1	Q4G0G2	97 aa		4.99	□□□□□ -1.61
HMGN1-215	ENST00000485550	IGKV2D-30	A0A075B6S6	120 aa		4.98	□□□□□ -1.61
HMGN1-215	ENST00000485550	IGKV2-30	P06310	120 aa		4.98	□□□□□ -1.61
HMGN1-215	ENST00000485550		Q5W150	140 aa		4.96	□□□□□ -1.62
HMGN1-215	ENST00000485550	BPY2	O14599	106 aa		4.94	□□□□□ -1.62
HMGN1-215	ENST00000485550		Q8N9L7	120 aa		4.94	□□□□□ -1.62
HMGN1-215	ENST00000485550	TSTD3	H0UI37	97 aa		4.92	□□□□□ -1.62
HMGN1-215	ENST00000485550		H3BT86	120 aa		4.92	□□□□□ -1.62
HMGN1-215	ENST00000485550	C7orf65	Q6ZTY9	151 aa		4.92	□□□□□ -1.62
HMGN1-215	ENST00000485550	HCG22	E2RYF7	251 aa		4.91	□□□□□ -1.62
HMGN1-215	ENST00000485550	SMIM6	P0DI80	62 aa		4.91	□□□□□ -1.62
HMGN1-215	ENST00000485550	C4orf26	Q17RF5	130 aa		4.91	□□□□□ -1.62
HMGN1-215	ENST00000485550	CASC2	Q6XLA1	102 aa		4.9	□□□□□ -1.63
HMGN1-215	ENST00000485550		A0A1W2PPM0	123 aa		4.89	□□□□□ -1.63
HMGN1-215	ENST00000485550	TAX1BP3	O14907	124 aa		4.89	□□□□□ -1.63
HMGN1-215	ENST00000485550	C5orf47	Q569G3	176 aa		4.86	□□□□□ -1.63
HMGN1-215	ENST00000485550		A6NN06	94 aa		4.85	□□□□□ -1.63
HMGN1-215	ENST00000485550	CXCL6	P80162	114 aa		4.84	□□□□□ -1.63
HMGN1-215	ENST00000485550	FAM236A	A0A1B0GUQ0	79 aa		4.83	□□□□□ -1.64
HMGN1-215	ENST00000485550	FAM236B	A0A1B0GV22	79 aa		4.83	□□□□□ -1.64
HMGN1-215	ENST00000485550	SPCS1	Q9Y6A9	102 aa		4.83	□□□□□ -1.64
HMGN1-215	ENST00000485550	KRTAP5-9	P26371	169 aa		4.82	□□□□□ -1.64

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