RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 LINC00472Q9H8W2 130 aa9.65□□□□□ -0.86
PTPN7-209ENST00000477554 Q6ZVQ6 151 aa9.65□□□□□ -0.87
PTPN7-209ENST00000477554 Q96NJ1 140 aa9.64□□□□□ -0.87
PTPN7-209ENST00000477554 J3KT08 172 aa9.62□□□□□ -0.87
PTPN7-209ENST00000477554 IGKV4-1P06312 121 aa9.6□□□□□ -0.87
PTPN7-209ENST00000477554 LCE2AQ5TA79 106 aaPredicted RBP9.6□□□□□ -0.87
PTPN7-209ENST00000477554 DEFB116Q30KQ4 102 aa9.59□□□□□ -0.87
PTPN7-209ENST00000477554 SIGMAR1Q99720 223 aa9.58□□□□□ -0.88
PTPN7-209ENST00000477554 BPY2O14599 106 aa9.57□□□□□ -0.88
PTPN7-209ENST00000477554 SEC61BP60468 96 aaKnown RBP9.56□□□□□ -0.88
PTPN7-209ENST00000477554 A0A0U1RQV1 116 aa9.53□□□□□ -0.88
PTPN7-209ENST00000477554 NDUFB1O75438 58 aa9.53□□□□□ -0.88
PTPN7-209ENST00000477554 PCOTHQ58A44 107 aa9.53□□□□□ -0.88
PTPN7-209ENST00000477554 LINC00643Q86TS7 51 aa9.53□□□□□ -0.88
PTPN7-209ENST00000477554 CXCL6P80162 114 aa9.52□□□□□ -0.89
PTPN7-209ENST00000477554 A8MWP4 228 aa9.51□□□□□ -0.89
PTPN7-209ENST00000477554 ATP5EP2Q5VTU8 51 aa9.51□□□□□ -0.89
PTPN7-209ENST00000477554 DSCR10P59022 87 aa9.49□□□□□ -0.89
PTPN7-209ENST00000477554 A0A1B0GVX0 72 aa9.48□□□□□ -0.89
PTPN7-209ENST00000477554 IGHV6-1A0A0B4J1U7 121 aa9.46□□□□□ -0.9
PTPN7-209ENST00000477554 IGKV3D-7A0A0C4DH55 119 aa9.46□□□□□ -0.9
PTPN7-209ENST00000477554 KRTAP19-2Q3LHN2 52 aa9.46□□□□□ -0.9
PTPN7-209ENST00000477554 PRR15Q8IV56 129 aa9.46□□□□□ -0.9
PTPN7-209ENST00000477554 K7EQZ3 153 aa9.44□□□□□ -0.9
PTPN7-209ENST00000477554 LCE2CQ5TA81 110 aa9.44□□□□□ -0.9
PTPN7-209ENST00000477554 C8orf87E5RJ46 101 aa9.43□□□□□ -0.9
PTPN7-209ENST00000477554 LINC00313P59037 77 aa9.42□□□□□ -0.9
PTPN7-209ENST00000477554 RPL37P61927 97 aaKnown RBP9.41□□□□□ -0.9
PTPN7-209ENST00000477554 Q8N9L7 120 aa9.4□□□□□ -0.9
PTPN7-209ENST00000477554 C8orf17Q9NRJ1 99 aa9.38□□□□□ -0.91
PTPN7-209ENST00000477554 HIST1H4AP62805 103 aaKnown RBP9.36□□□□□ -0.91
PTPN7-209ENST00000477554 NOTCH2NLQ7Z3S9 236 aa9.35□□□□□ -0.91
PTPN7-209ENST00000477554 MMP24-AS1A0A0U1RRL7 71 aa9.33□□□□□ -0.92
PTPN7-209ENST00000477554 MT-ATP8P03928 68 aa9.32□□□□□ -0.92
PTPN7-209ENST00000477554 IMUPQ9GZP8 106 aa9.32□□□□□ -0.92
PTPN7-209ENST00000477554 hDV103S1A0JD37 113 aa9.31□□□□□ -0.92
PTPN7-209ENST00000477554 HCG22E2RYF7 251 aa9.31□□□□□ -0.92
PTPN7-209ENST00000477554 CASC2Q6XLA1 102 aa9.3□□□□□ -0.92
PTPN7-209ENST00000477554 TMEM254Q8TBM7 123 aa9.3□□□□□ -0.92
PTPN7-209ENST00000477554 KRTAP16-1A8MUX0 517 aa9.29□□□□□ -0.92
PTPN7-209ENST00000477554 KRTAP9-2Q9BYQ4 174 aa9.29□□□□□ -0.92
PTPN7-209ENST00000477554 WFDC13Q8IUB5 93 aa9.28□□□□□ -0.92
PTPN7-209ENST00000477554 MRPL34Q9BQ48 92 aaKnown RBP9.27□□□□□ -0.93
PTPN7-209ENST00000477554 FLGP20930 4061 aaPredicted RBP9.27□□□□□ -0.93
PTPN7-209ENST00000477554 A0A087WVE0 104 aa9.26□□□□□ -0.93
PTPN7-209ENST00000477554 MT1HP80294 61 aa9.26□□□□□ -0.93
PTPN7-209ENST00000477554 Q75L30 129 aa9.25□□□□□ -0.93
PTPN7-209ENST00000477554 C20orf166-AS1Q96NR2 134 aa9.24□□□□□ -0.93
PTPN7-209ENST00000477554 A8MUU9 505 aa9.22□□□□□ -0.93
PTPN7-209ENST00000477554 Q8N9P0 234 aaPredicted RBP9.22□□□□□ -0.93
PTPN7-209ENST00000477554 NDUFS5O43920 106 aa9.18□□□□□ -0.94
PTPN7-209ENST00000477554 ATP11AUNQ6ZP68 121 aa9.16□□□□□ -0.94
PTPN7-209ENST00000477554 SCGB1A1P11684 91 aa9.13□□□□□ -0.95
PTPN7-209ENST00000477554 TP53AIP1Q9HCN2 124 aa9.13□□□□□ -0.95
PTPN7-209ENST00000477554 FAM236AA0A1B0GUQ0 79 aa9.11□□□□□ -0.95
PTPN7-209ENST00000477554 FAM236BA0A1B0GV22 79 aa9.11□□□□□ -0.95
PTPN7-209ENST00000477554 ZCCHC13Q8WW36 166 aaKnown RBP9.08□□□□□ -0.96
PTPN7-209ENST00000477554 COX6B2Q6YFQ2 88 aa9.07□□□□□ -0.96
PTPN7-209ENST00000477554 LORP23490 312 aaPredicted RBP9.05□□□□□ -0.96
PTPN7-209ENST00000477554 KRTAP10-6P60371 365 aaPredicted RBP9.05□□□□□ -0.96
PTPN7-209ENST00000477554 UQCRQO14949 82 aa9.04□□□□□ -0.96
PTPN7-209ENST00000477554 ATOX1O00244 68 aa9.03□□□□□ -0.96
PTPN7-209ENST00000477554 SMIM20Q8N5G0 67 aa9.03□□□□□ -0.96
PTPN7-209ENST00000477554 OCR1Q9BZK8 76 aa9.03□□□□□ -0.96
PTPN7-209ENST00000477554 M0R2T5 61 aa8.99□□□□□ -0.97
PTPN7-209ENST00000477554 LCE2DQ5TA82 110 aaPredicted RBP8.99□□□□□ -0.97
PTPN7-209ENST00000477554 Q5W150 140 aa8.99□□□□□ -0.97
PTPN7-209ENST00000477554 TRAV22A0A0B4J277 110 aa8.98□□□□□ -0.97
PTPN7-209ENST00000477554 FSIP2Q5CZC0 6907 aa8.96□□□□□ -0.98
PTPN7-209ENST00000477554 TRAV7A0A075B6U4 112 aa8.96□□□□□ -0.98
PTPN7-209ENST00000477554 C5orf47Q569G3 176 aa8.94□□□□□ -0.98
PTPN7-209ENST00000477554 H0Y9P7 68 aa8.92□□□□□ -0.98
PTPN7-209ENST00000477554 KRTAP9-6A0A140TA67 174 aa8.91□□□□□ -0.98
PTPN7-209ENST00000477554 HRES1P13985 223 aa8.91□□□□□ -0.98
PTPN7-209ENST00000477554 MP68P56378 58 aa8.91□□□□□ -0.98
PTPN7-209ENST00000477554 SERP2Q8N6R1 65 aa8.89□□□□□ -0.99
PTPN7-209ENST00000477554 SPINK7P58062 85 aa8.88□□□□□ -0.99
PTPN7-209ENST00000477554 C7orf65Q6ZTY9 151 aa8.88□□□□□ -0.99
PTPN7-209ENST00000477554 MPLKIPQ8TAP9 179 aa8.88□□□□□ -0.99
PTPN7-209ENST00000477554 IGKV2D-30A0A075B6S6 120 aa8.87□□□□□ -0.99
PTPN7-209ENST00000477554 H3BPC8 53 aa8.87□□□□□ -0.99
PTPN7-209ENST00000477554 IGKV2-30P06310 120 aa8.87□□□□□ -0.99
PTPN7-209ENST00000477554 LOC101927531A0A1B0GV80 90 aa8.86□□□□□ -0.99
PTPN7-209ENST00000477554 C1orf64Q8NEQ6 169 aa8.84□□□□□ -0.99
PTPN7-209ENST00000477554 LINC00208Q96KT6 92 aa8.84□□□□□ -0.99
PTPN7-209ENST00000477554 ANAPC13Q9BS18 74 aa8.82□□□□□ -1
PTPN7-209ENST00000477554 KRTAP9-8Q9BYQ0 159 aa8.8□□□□□ -1
PTPN7-209ENST00000477554 CYP4F30PQ9H0H9 118 aa8.8□□□□□ -1
PTPN7-209ENST00000477554 COX7CP15954 63 aa8.79□□□□□ -1
PTPN7-209ENST00000477554 FAM236DA0A1B0GTK5 79 aa8.78□□□□□ -1
PTPN7-209ENST00000477554 FAM236CP0DP71 79 aa8.78□□□□□ -1
PTPN7-209ENST00000477554 CRCT1Q9UGL9 99 aa8.76□□□□□ -1.01
PTPN7-209ENST00000477554 C20orf197Q8N268 126 aa8.73□□□□□ -1.01
PTPN7-209ENST00000477554 RBM12B-AS1Q9P1G2 102 aa8.72□□□□□ -1.01
PTPN7-209ENST00000477554 SNURFQ9Y675 71 aa8.69□□□□□ -1.02
PTPN7-209ENST00000477554 KLKP1Q107X0 134 aa8.68□□□□□ -1.02
PTPN7-209ENST00000477554 MT2AP02795 61 aa8.67□□□□□ -1.02
PTPN7-209ENST00000477554 USH2AO75445 5202 aa8.66□□□□□ -1.02
PTPN7-209ENST00000477554 C4orf26Q17RF5 130 aa8.64□□□□□ -1.03
PTPN7-209ENST00000477554 MT1FP04733 61 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms