RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 CLEC2BQ92478 149 aa6.24□□□□□ -1.41
VARS2-208ENST00000477052 COX7CP15954 63 aa6.23□□□□□ -1.41
VARS2-208ENST00000477052 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.23□□□□□ -1.41
VARS2-208ENST00000477052 Q6ZQY7 126 aa6.23□□□□□ -1.41
VARS2-208ENST00000477052 C5orf47Q569G3 176 aa6.22□□□□□ -1.41
VARS2-208ENST00000477052 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.42
VARS2-208ENST00000477052 KRTAP10-6P60371 365 aaPredicted RBP6.21□□□□□ -1.42
VARS2-208ENST00000477052 FAM218AQ96MZ4 157 aa6.21□□□□□ -1.42
VARS2-208ENST00000477052 RPL37P61927 97 aaKnown RBP6.2□□□□□ -1.42
VARS2-208ENST00000477052 Q5XG85 94 aa6.2□□□□□ -1.42
VARS2-208ENST00000477052 M0R2T5 61 aa6.19□□□□□ -1.42
VARS2-208ENST00000477052 TMEM258P61165 79 aa6.19□□□□□ -1.42
VARS2-208ENST00000477052 ATP5EP2Q5VTU8 51 aa6.19□□□□□ -1.42
VARS2-208ENST00000477052 Q6JHZ5 121 aa6.18□□□□□ -1.42
VARS2-208ENST00000477052 COX6B2Q6YFQ2 88 aa6.17□□□□□ -1.42
VARS2-208ENST00000477052 F8WEM9 126 aa6.16□□□□□ -1.42
VARS2-208ENST00000477052 JMJD7-PLA2G4BH0Y9G9 81 aa6.16□□□□□ -1.42
VARS2-208ENST00000477052 SERP2Q8N6R1 65 aa6.16□□□□□ -1.42
VARS2-208ENST00000477052 H3BQ85 93 aa6.15□□□□□ -1.42
VARS2-208ENST00000477052 GHRHP01286 108 aa6.15□□□□□ -1.42
VARS2-208ENST00000477052 FLGP20930 4061 aaPredicted RBP6.15□□□□□ -1.43
VARS2-208ENST00000477052 HIST1H4AP62805 103 aaKnown RBP6.14□□□□□ -1.43
VARS2-208ENST00000477052 ORMDL1Q9P0S3 153 aa6.12□□□□□ -1.43
VARS2-208ENST00000477052 IGFL1Q6UW32 110 aa6.11□□□□□ -1.43
VARS2-208ENST00000477052 OBSCN-AS1Q96MR7 158 aa6.11□□□□□ -1.43
VARS2-208ENST00000477052 TMEM256-PLSCR3K7ERE1 68 aa6.1□□□□□ -1.43
VARS2-208ENST00000477052 CCKP06307 115 aa6.09□□□□□ -1.43
VARS2-208ENST00000477052 UBL5Q9BZL1 73 aa6.09□□□□□ -1.43
VARS2-208ENST00000477052 PDE6GP18545 87 aa6.07□□□□□ -1.44
VARS2-208ENST00000477052 ATP11AUNQ6ZP68 121 aa6.05□□□□□ -1.44
VARS2-208ENST00000477052 C14orf132Q9NPU4 83 aa6.05□□□□□ -1.44
VARS2-208ENST00000477052 Q96NJ1 140 aa6.04□□□□□ -1.44
VARS2-208ENST00000477052 IGKV3D-7A0A0C4DH55 119 aa6.03□□□□□ -1.44
VARS2-208ENST00000477052 NDUFC1O43677 76 aa6.03□□□□□ -1.44
VARS2-208ENST00000477052 ATP5EP56381 51 aaPredicted RBP6.03□□□□□ -1.44
VARS2-208ENST00000477052 Q75L30 129 aa6.03□□□□□ -1.44
VARS2-208ENST00000477052 LINC00846Q9NV44 126 aa6.03□□□□□ -1.44
VARS2-208ENST00000477052 TRAV7A0A075B6U4 112 aa6□□□□□ -1.45
VARS2-208ENST00000477052 SERP1Q9Y6X1 66 aa6□□□□□ -1.45
VARS2-208ENST00000477052 FAM236DA0A1B0GTK5 79 aa5.99□□□□□ -1.45
VARS2-208ENST00000477052 FAM236CP0DP71 79 aa5.99□□□□□ -1.45
VARS2-208ENST00000477052 TRBV7-4A0A0J9YYF1 115 aa5.98□□□□□ -1.45
VARS2-208ENST00000477052 A0A1W2PNM2 257 aa5.98□□□□□ -1.45
VARS2-208ENST00000477052 RBM3P98179 157 aaKnown RBP5.98□□□□□ -1.45
VARS2-208ENST00000477052 DSCR8Q96T75 97 aa5.98□□□□□ -1.45
VARS2-208ENST00000477052 LOC110117498A0A087WWA1 95 aa5.97□□□□□ -1.45
VARS2-208ENST00000477052 CXCL6P80162 114 aa5.97□□□□□ -1.45
VARS2-208ENST00000477052 A0A087WSZ3 146 aa5.96□□□□□ -1.46
VARS2-208ENST00000477052 DSCR10P59022 87 aa5.96□□□□□ -1.46
VARS2-208ENST00000477052 SMIM26A0A096LP01 95 aa5.95□□□□□ -1.46
VARS2-208ENST00000477052 C20orf166-AS1Q96NR2 134 aa5.95□□□□□ -1.46
VARS2-208ENST00000477052 KRTAP9-8Q9BYQ0 159 aa5.95□□□□□ -1.46
VARS2-208ENST00000477052 USH2AO75445 5202 aa5.95□□□□□ -1.46
VARS2-208ENST00000477052 A0A087WVE0 104 aa5.94□□□□□ -1.46
VARS2-208ENST00000477052 A8MUU9 505 aa5.94□□□□□ -1.46
VARS2-208ENST00000477052 KLKP1Q107X0 134 aa5.93□□□□□ -1.46
VARS2-208ENST00000477052 C20orf197Q8N268 126 aa5.93□□□□□ -1.46
VARS2-208ENST00000477052 SSPOA2VEC9 5147 aa5.93□□□□□ -1.46
VARS2-208ENST00000477052 KRTAP16-1A8MUX0 517 aa5.92□□□□□ -1.46
VARS2-208ENST00000477052 Q6ZQT0 140 aa5.91□□□□□ -1.46
VARS2-208ENST00000477052 PRO0628Q9UI54 55 aa5.91□□□□□ -1.46
VARS2-208ENST00000477052 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.88□□□□□ -1.47
VARS2-208ENST00000477052 NOTCH2NLQ7Z3S9 236 aa5.88□□□□□ -1.47
VARS2-208ENST00000477052 A0A1B0GW54 56 aa5.87□□□□□ -1.47
VARS2-208ENST00000477052 C4orf26Q17RF5 130 aa5.87□□□□□ -1.47
VARS2-208ENST00000477052 DEFB116Q30KQ4 102 aa5.87□□□□□ -1.47
VARS2-208ENST00000477052 Q6ZVQ6 151 aa5.87□□□□□ -1.47
VARS2-208ENST00000477052 H7BZZ5 65 aa5.86□□□□□ -1.47
VARS2-208ENST00000477052 MT2AP02795 61 aa5.86□□□□□ -1.47
VARS2-208ENST00000477052 KRTAP9-7A8MTY7 169 aa5.85□□□□□ -1.47
VARS2-208ENST00000477052 IGKV4-1P06312 121 aa5.85□□□□□ -1.47
VARS2-208ENST00000477052 CYSTM1Q9H1C7 97 aa5.85□□□□□ -1.47
VARS2-208ENST00000477052 LINC00472Q9H8W2 130 aa5.85□□□□□ -1.47
VARS2-208ENST00000477052 LINC00313P59037 77 aa5.84□□□□□ -1.47
VARS2-208ENST00000477052 MT1FP04733 61 aa5.83□□□□□ -1.48
VARS2-208ENST00000477052 HRES1P13985 223 aa5.82□□□□□ -1.48
VARS2-208ENST00000477052 BPY2O14599 106 aa5.81□□□□□ -1.48
VARS2-208ENST00000477052 LCE2BO14633 110 aa5.81□□□□□ -1.48
VARS2-208ENST00000477052 NREPQ16612 68 aa5.81□□□□□ -1.48
VARS2-208ENST00000477052 FCGBPQ9Y6R7 5405 aaPredicted RBP5.81□□□□□ -1.48
VARS2-208ENST00000477052 IGHV6-1A0A0B4J1U7 121 aa5.8□□□□□ -1.48
VARS2-208ENST00000477052 MPLKIPQ8TAP9 179 aa5.79□□□□□ -1.48
VARS2-208ENST00000477052 TMEM254Q8TBM7 123 aa5.79□□□□□ -1.48
VARS2-208ENST00000477052 KRTAP10-10P60014 251 aa5.78□□□□□ -1.48
VARS2-208ENST00000477052 KRTAP19-1Q8IUB9 90 aa5.77□□□□□ -1.49
VARS2-208ENST00000477052 RBM12B-AS1Q9P1G2 102 aa5.77□□□□□ -1.49
VARS2-208ENST00000477052 SNURFQ9Y675 71 aa5.77□□□□□ -1.49
VARS2-208ENST00000477052 A0A1B0GVX0 72 aa5.76□□□□□ -1.49
VARS2-208ENST00000477052 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
VARS2-208ENST00000477052 C8orf87E5RJ46 101 aa5.75□□□□□ -1.49
VARS2-208ENST00000477052 A8MWP4 228 aa5.73□□□□□ -1.49
VARS2-208ENST00000477052 NDUFB1O75438 58 aa5.73□□□□□ -1.49
VARS2-208ENST00000477052 V9GYY9 64 aa5.73□□□□□ -1.49
VARS2-208ENST00000477052 BRK1Q8WUW1 75 aa5.72□□□□□ -1.49
VARS2-208ENST00000477052 OCR1Q9BZK8 76 aa5.69□□□□□ -1.5
VARS2-208ENST00000477052 SPINK7P58062 85 aa5.68□□□□□ -1.5
VARS2-208ENST00000477052 PRR15Q8IV56 129 aa5.68□□□□□ -1.5
VARS2-208ENST00000477052 ZCCHC13Q8WW36 166 aaKnown RBP5.68□□□□□ -1.5
VARS2-208ENST00000477052 C8orf17Q9NRJ1 99 aa5.68□□□□□ -1.5
VARS2-208ENST00000477052 K7EQZ3 153 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms