RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 LINC00575Q6W349 94 aa2.96□□□□□ -1.94
NPHP3-206ENST00000474871 SSBP3-AS1Q7Z2R9 100 aa2.96□□□□□ -1.94
NPHP3-206ENST00000474871 GIG44P09565 113 aaPredicted RBP2.96□□□□□ -1.94
NPHP3-206ENST00000474871 NF1P21359 2839 aa2.95□□□□□ -1.94
NPHP3-206ENST00000474871 SPINT4Q6UDR6 99 aa2.95□□□□□ -1.94
NPHP3-206ENST00000474871 ANK2Q01484 3957 aa2.94□□□□□ -1.94
NPHP3-206ENST00000474871 LYSTQ99698 3801 aa2.94□□□□□ -1.94
NPHP3-206ENST00000474871 NIPBLQ6KC79 2804 aaeCLIP2.94□□□□□ -1.94
NPHP3-206ENST00000474871 FRAS1Q86XX4 4008 aa2.94□□□□□ -1.94
NPHP3-206ENST00000474871 IGKV2D-30A0A075B6S6 120 aa2.94□□□□□ -1.94
NPHP3-206ENST00000474871 IGKV2-30P06310 120 aa2.94□□□□□ -1.94
NPHP3-206ENST00000474871 LINC00304Q8N9R0 145 aa2.93□□□□□ -1.94
NPHP3-206ENST00000474871 Q5W150 140 aa2.93□□□□□ -1.94
NPHP3-206ENST00000474871 NSD1Q96L73 2696 aaPredicted RBP2.92□□□□□ -1.94
NPHP3-206ENST00000474871 H0Y9P7 68 aa2.92□□□□□ -1.94
NPHP3-206ENST00000474871 H3BPC8 53 aa2.92□□□□□ -1.94
NPHP3-206ENST00000474871 C6orf48Q9UBA6 75 aa2.92□□□□□ -1.94
NPHP3-206ENST00000474871 Q6ZRX8 168 aa2.92□□□□□ -1.94
NPHP3-206ENST00000474871 SPINK1P00995 79 aa2.91□□□□□ -1.94
NPHP3-206ENST00000474871 HIVEP1P15822 2718 aa2.91□□□□□ -1.94
NPHP3-206ENST00000474871 TENM2Q9NT68 2774 aa2.9□□□□□ -1.94
NPHP3-206ENST00000474871 ACYP2P14621 99 aa2.9□□□□□ -1.95
NPHP3-206ENST00000474871 PSORS1C2Q9UIG4 136 aa2.9□□□□□ -1.95
NPHP3-206ENST00000474871 TENM1Q9UKZ4 2725 aa2.9□□□□□ -1.95
NPHP3-206ENST00000474871 DSCR10P59022 87 aa2.89□□□□□ -1.95
NPHP3-206ENST00000474871 MYCBP2O75592 4640 aa2.89□□□□□ -1.95
NPHP3-206ENST00000474871 VWFP04275 2813 aa2.89□□□□□ -1.95
NPHP3-206ENST00000474871 VPS13DQ5THJ4 4388 aa2.89□□□□□ -1.95
NPHP3-206ENST00000474871 KRTAP29-1A8MX34 341 aaPredicted RBP2.89□□□□□ -1.95
NPHP3-206ENST00000474871 KRTAP10-11P60412 298 aa2.89□□□□□ -1.95
NPHP3-206ENST00000474871 HRES1P13985 223 aa2.88□□□□□ -1.95
NPHP3-206ENST00000474871 PCOTHQ58A44 107 aa2.88□□□□□ -1.95
NPHP3-206ENST00000474871 Q96NJ1 140 aa2.88□□□□□ -1.95
NPHP3-206ENST00000474871 APLNQ9ULZ1 77 aa2.88□□□□□ -1.95
NPHP3-206ENST00000474871 IGLV7-43P04211 117 aa2.86□□□□□ -1.95
NPHP3-206ENST00000474871 KRTAP10-8P60410 259 aa2.86□□□□□ -1.95
NPHP3-206ENST00000474871 CAMK2N1Q7Z7J9 78 aa2.86□□□□□ -1.95
NPHP3-206ENST00000474871 NOTCH1P46531 2555 aa2.86□□□□□ -1.95
NPHP3-206ENST00000474871 TEP1Q99973 2627 aaKnown RBP2.85□□□□□ -1.95
NPHP3-206ENST00000474871 SMR3BP02814 79 aaPredicted RBP2.85□□□□□ -1.95
NPHP3-206ENST00000474871 A0A1B0GU69 56 aa2.85□□□□□ -1.95
NPHP3-206ENST00000474871 DEFB116Q30KQ4 102 aa2.84□□□□□ -1.95
NPHP3-206ENST00000474871 MRPL34Q9BQ48 92 aaKnown RBP2.84□□□□□ -1.95
NPHP3-206ENST00000474871 DNAH1Q9P2D7 4330 aa2.84□□□□□ -1.95
NPHP3-206ENST00000474871 Q6ZSA8 131 aa2.84□□□□□ -1.96
NPHP3-206ENST00000474871 IGLV6-57P01721 117 aa2.83□□□□□ -1.96
NPHP3-206ENST00000474871 CRIPTQ9P021 101 aa2.83□□□□□ -1.96
NPHP3-206ENST00000474871 KRTAP23-1A1A580 65 aa2.82□□□□□ -1.96
NPHP3-206ENST00000474871 DMAC1Q96GE9 116 aa2.82□□□□□ -1.96
NPHP3-206ENST00000474871 K7EQZ3 153 aa2.81□□□□□ -1.96
NPHP3-206ENST00000474871 TPRXLQ17RH7 258 aa2.81□□□□□ -1.96
NPHP3-206ENST00000474871 M0R2T5 61 aa2.81□□□□□ -1.96
NPHP3-206ENST00000474871 COL6A5A8TX70 2615 aa2.81□□□□□ -1.96
NPHP3-206ENST00000474871 DMBT1Q9UGM3 2413 aaPredicted RBP2.81□□□□□ -1.96
NPHP3-206ENST00000474871 UQCR11O14957 56 aa2.8□□□□□ -1.96
NPHP3-206ENST00000474871 HUWE1Q7Z6Z7 4374 aaKnown RBP2.8□□□□□ -1.96
NPHP3-206ENST00000474871 KRTAP3-1Q9BYR8 98 aa2.8□□□□□ -1.96
NPHP3-206ENST00000474871 PKD1L1Q8TDX9 2849 aa2.8□□□□□ -1.96
NPHP3-206ENST00000474871 LCE4AQ5TA78 99 aa2.78□□□□□ -1.96
NPHP3-206ENST00000474871 DYNC2H1Q8NCM8 4307 aaKnown RBP2.78□□□□□ -1.96
NPHP3-206ENST00000474871 NBEAL2Q6ZNJ1 2754 aa2.78□□□□□ -1.96
NPHP3-206ENST00000474871 FAM168BA1KXE4 195 aa2.78□□□□□ -1.97
NPHP3-206ENST00000474871 NBEAL1Q6ZS30 2694 aa2.77□□□□□ -1.97
NPHP3-206ENST00000474871 C9orf92A6NGG3 77 aa2.77□□□□□ -1.97
NPHP3-206ENST00000474871 Q8N1X5 172 aa2.77□□□□□ -1.97
NPHP3-206ENST00000474871 IGFL1Q6UW32 110 aa2.77□□□□□ -1.97
NPHP3-206ENST00000474871 DNAH7Q8WXX0 4024 aa2.76□□□□□ -1.97
NPHP3-206ENST00000474871 IGLV5-48A0A075B6I7 105 aa2.76□□□□□ -1.97
NPHP3-206ENST00000474871 A0A1B0GU33 70 aa2.76□□□□□ -1.97
NPHP3-206ENST00000474871 DNAH9Q9NYC9 4486 aa2.75□□□□□ -1.97
NPHP3-206ENST00000474871 KRTAP10-2P60368 255 aa2.75□□□□□ -1.97
NPHP3-206ENST00000474871 A0A1W2PNN7 141 aa2.75□□□□□ -1.97
NPHP3-206ENST00000474871 KRTAP11-1Q8IUC1 163 aa2.74□□□□□ -1.97
NPHP3-206ENST00000474871 Q5VSD8 79 aa2.74□□□□□ -1.97
NPHP3-206ENST00000474871 FBN3Q75N90 2809 aa2.73□□□□□ -1.97
NPHP3-206ENST00000474871 H0YAA0 97 aa2.73□□□□□ -1.97
NPHP3-206ENST00000474871 XP32Q5T750 250 aa2.73□□□□□ -1.97
NPHP3-206ENST00000474871 Q8N377 158 aa2.73□□□□□ -1.97
NPHP3-206ENST00000474871 TENM3Q9P273 2699 aa2.73□□□□□ -1.97
NPHP3-206ENST00000474871 KRTAP13-3Q3SY46 172 aa2.72□□□□□ -1.97
NPHP3-206ENST00000474871 LOC100996750A0A140TA64 210 aa2.72□□□□□ -1.97
NPHP3-206ENST00000474871 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
NPHP3-206ENST00000474871 PRKDCP78527 4128 aaKnown RBP2.72□□□□□ -1.97
NPHP3-206ENST00000474871 STAB2Q8WWQ8 2551 aa2.71□□□□□ -1.97
NPHP3-206ENST00000474871 COL7A1Q02388 2944 aa2.71□□□□□ -1.98
NPHP3-206ENST00000474871 KRTAP19-1Q8IUB9 90 aa2.7□□□□□ -1.98
NPHP3-206ENST00000474871 DNHD1Q96M86 4753 aa2.7□□□□□ -1.98
NPHP3-206ENST00000474871 DNAH8Q96JB1 4490 aa2.7□□□□□ -1.98
NPHP3-206ENST00000474871 STARD9Q9P2P6 4700 aa2.7□□□□□ -1.98
NPHP3-206ENST00000474871 ANAPC11Q9NYG5 84 aa2.7□□□□□ -1.98
NPHP3-206ENST00000474871 PLECQ15149 4684 aaKnown RBP2.69□□□□□ -1.98
NPHP3-206ENST00000474871 DNAH10Q8IVF4 4471 aa2.69□□□□□ -1.98
NPHP3-206ENST00000474871 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
NPHP3-206ENST00000474871 KRTAP9-4Q9BYQ2 154 aa2.68□□□□□ -1.98
NPHP3-206ENST00000474871 MEGF8Q7Z7M0 2845 aa2.68□□□□□ -1.98
NPHP3-206ENST00000474871 KRTAP1-5Q9BYS1 174 aa2.68□□□□□ -1.98
NPHP3-206ENST00000474871 DNAH11Q96DT5 4516 aa2.67□□□□□ -1.98
NPHP3-206ENST00000474871 KRTAP9-6A0A140TA67 174 aa2.66□□□□□ -1.98
NPHP3-206ENST00000474871 KRTAP9-7A8MTY7 169 aa2.66□□□□□ -1.98
NPHP3-206ENST00000474871 A0A0G2JQZ4 141 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms