RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 K7ERU9 68 aa7.25□□□□□ -1.25
TPM3-216ENST00000473036 C1orf195Q5TG92 126 aa7.25□□□□□ -1.25
TPM3-216ENST00000473036 J3KT08 172 aa7.24□□□□□ -1.25
TPM3-216ENST00000473036 CDIP1Q9H305 208 aa7.24□□□□□ -1.25
TPM3-216ENST00000473036 XP32Q5T750 250 aa7.18□□□□□ -1.26
TPM3-216ENST00000473036 LINC00472Q9H8W2 130 aa7.18□□□□□ -1.26
TPM3-216ENST00000473036 LINC00846Q9NV44 126 aa7.18□□□□□ -1.26
TPM3-216ENST00000473036 NDUFB1O75438 58 aa7.17□□□□□ -1.26
TPM3-216ENST00000473036 Q6ZVQ6 151 aa7.17□□□□□ -1.26
TPM3-216ENST00000473036 C9orf92A6NGG3 77 aa7.16□□□□□ -1.26
TPM3-216ENST00000473036 BPY2O14599 106 aa7.16□□□□□ -1.26
TPM3-216ENST00000473036 SIGMAR1Q99720 223 aa7.16□□□□□ -1.26
TPM3-216ENST00000473036 IGKV4-1P06312 121 aa7.15□□□□□ -1.26
TPM3-216ENST00000473036 FSIP2Q5CZC0 6907 aa7.14□□□□□ -1.27
TPM3-216ENST00000473036 ATP5EP2Q5VTU8 51 aa7.14□□□□□ -1.27
TPM3-216ENST00000473036 KRTAP4-1Q9BYQ7 146 aa7.14□□□□□ -1.27
TPM3-216ENST00000473036 CXCL6P80162 114 aa7.13□□□□□ -1.27
TPM3-216ENST00000473036 LINC00643Q86TS7 51 aa7.13□□□□□ -1.27
TPM3-216ENST00000473036 Q96NJ1 140 aa7.13□□□□□ -1.27
TPM3-216ENST00000473036 A8MWP4 228 aa7.1□□□□□ -1.27
TPM3-216ENST00000473036 CRCT1Q9UGL9 99 aa7.1□□□□□ -1.27
TPM3-216ENST00000473036 C8orf87E5RJ46 101 aa7.07□□□□□ -1.28
TPM3-216ENST00000473036 DEFB116Q30KQ4 102 aa7.07□□□□□ -1.28
TPM3-216ENST00000473036 A0A1B0GVX0 72 aa7.06□□□□□ -1.28
TPM3-216ENST00000473036 PRR15Q8IV56 129 aa7.05□□□□□ -1.28
TPM3-216ENST00000473036 DSCR10P59022 87 aa7.04□□□□□ -1.28
TPM3-216ENST00000473036 LINC00313P59037 77 aa7.04□□□□□ -1.28
TPM3-216ENST00000473036 SEC61BP60468 96 aaKnown RBP7.04□□□□□ -1.28
TPM3-216ENST00000473036 IGHV6-1A0A0B4J1U7 121 aa7.03□□□□□ -1.28
TPM3-216ENST00000473036 IGKV3D-7A0A0C4DH55 119 aa7.02□□□□□ -1.29
TPM3-216ENST00000473036 PCOTHQ58A44 107 aa7.02□□□□□ -1.29
TPM3-216ENST00000473036 FLGP20930 4061 aaPredicted RBP7.01□□□□□ -1.29
TPM3-216ENST00000473036 RPL37P61927 97 aaKnown RBP7.01□□□□□ -1.29
TPM3-216ENST00000473036 IMUPQ9GZP8 106 aa7.01□□□□□ -1.29
TPM3-216ENST00000473036 K7EQZ3 153 aa6.99□□□□□ -1.29
TPM3-216ENST00000473036 C8orf17Q9NRJ1 99 aa6.98□□□□□ -1.29
TPM3-216ENST00000473036 HIST1H4AP62805 103 aaKnown RBP6.97□□□□□ -1.29
TPM3-216ENST00000473036 NOTCH2NLQ7Z3S9 236 aa6.97□□□□□ -1.29
TPM3-216ENST00000473036 hDV103S1A0JD37 113 aa6.95□□□□□ -1.3
TPM3-216ENST00000473036 HCG22E2RYF7 251 aa6.94□□□□□ -1.3
TPM3-216ENST00000473036 KRTAP19-2Q3LHN2 52 aa6.94□□□□□ -1.3
TPM3-216ENST00000473036 TMEM254Q8TBM7 123 aa6.94□□□□□ -1.3
TPM3-216ENST00000473036 KRTAP16-1A8MUX0 517 aa6.93□□□□□ -1.3
TPM3-216ENST00000473036 CASC2Q6XLA1 102 aa6.93□□□□□ -1.3
TPM3-216ENST00000473036 Q75L30 129 aa6.93□□□□□ -1.3
TPM3-216ENST00000473036 Q8N9L7 120 aa6.93□□□□□ -1.3
TPM3-216ENST00000473036 C20orf166-AS1Q96NR2 134 aa6.92□□□□□ -1.3
TPM3-216ENST00000473036 MMP24-AS1A0A0U1RRL7 71 aa6.91□□□□□ -1.3
TPM3-216ENST00000473036 A8MUU9 505 aa6.91□□□□□ -1.3
TPM3-216ENST00000473036 LCE2CQ5TA81 110 aa6.91□□□□□ -1.3
TPM3-216ENST00000473036 MRPL34Q9BQ48 92 aaKnown RBP6.91□□□□□ -1.3
TPM3-216ENST00000473036 Q8N9P0 234 aaPredicted RBP6.89□□□□□ -1.31
TPM3-216ENST00000473036 MT-ATP8P03928 68 aa6.88□□□□□ -1.31
TPM3-216ENST00000473036 TP53AIP1Q9HCN2 124 aa6.88□□□□□ -1.31
TPM3-216ENST00000473036 WFDC13Q8IUB5 93 aa6.87□□□□□ -1.31
TPM3-216ENST00000473036 ATP11AUNQ6ZP68 121 aa6.86□□□□□ -1.31
TPM3-216ENST00000473036 LCE2BO14633 110 aa6.84□□□□□ -1.31
TPM3-216ENST00000473036 NDUFS5O43920 106 aa6.84□□□□□ -1.31
TPM3-216ENST00000473036 SCGB1A1P11684 91 aa6.84□□□□□ -1.31
TPM3-216ENST00000473036 SMIM20Q8N5G0 67 aa6.83□□□□□ -1.32
TPM3-216ENST00000473036 A0A087WVE0 104 aa6.82□□□□□ -1.32
TPM3-216ENST00000473036 MT1HP80294 61 aa6.81□□□□□ -1.32
TPM3-216ENST00000473036 UQCRQO14949 82 aa6.78□□□□□ -1.32
TPM3-216ENST00000473036 LORP23490 312 aaPredicted RBP6.78□□□□□ -1.32
TPM3-216ENST00000473036 ZCCHC13Q8WW36 166 aaKnown RBP6.77□□□□□ -1.33
TPM3-216ENST00000473036 FAM236AA0A1B0GUQ0 79 aa6.76□□□□□ -1.33
TPM3-216ENST00000473036 FAM236BA0A1B0GV22 79 aa6.76□□□□□ -1.33
TPM3-216ENST00000473036 ATOX1O00244 68 aa6.75□□□□□ -1.33
TPM3-216ENST00000473036 KRTAP10-6P60371 365 aaPredicted RBP6.74□□□□□ -1.33
TPM3-216ENST00000473036 C5orf47Q569G3 176 aa6.72□□□□□ -1.33
TPM3-216ENST00000473036 TRAV7A0A075B6U4 112 aa6.7□□□□□ -1.34
TPM3-216ENST00000473036 TRAV22A0A0B4J277 110 aa6.7□□□□□ -1.34
TPM3-216ENST00000473036 MP68P56378 58 aa6.7□□□□□ -1.34
TPM3-216ENST00000473036 OCR1Q9BZK8 76 aa6.7□□□□□ -1.34
TPM3-216ENST00000473036 H3BPC8 53 aa6.69□□□□□ -1.34
TPM3-216ENST00000473036 M0R2T5 61 aa6.67□□□□□ -1.34
TPM3-216ENST00000473036 HRES1P13985 223 aa6.67□□□□□ -1.34
TPM3-216ENST00000473036 LOC101927531A0A1B0GV80 90 aa6.65□□□□□ -1.34
TPM3-216ENST00000473036 Q5W150 140 aa6.65□□□□□ -1.34
TPM3-216ENST00000473036 MPLKIPQ8TAP9 179 aa6.65□□□□□ -1.34
TPM3-216ENST00000473036 KRTAP9-7A8MTY7 169 aa6.64□□□□□ -1.35
TPM3-216ENST00000473036 H0Y9P7 68 aa6.64□□□□□ -1.35
TPM3-216ENST00000473036 C7orf65Q6ZTY9 151 aa6.64□□□□□ -1.35
TPM3-216ENST00000473036 SERP2Q8N6R1 65 aa6.64□□□□□ -1.35
TPM3-216ENST00000473036 COX6B2Q6YFQ2 88 aa6.63□□□□□ -1.35
TPM3-216ENST00000473036 SPINK7P58062 85 aa6.62□□□□□ -1.35
TPM3-216ENST00000473036 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.61□□□□□ -1.35
TPM3-216ENST00000473036 IGKV2-30P06310 120 aa6.59□□□□□ -1.35
TPM3-216ENST00000473036 C1orf64Q8NEQ6 169 aa6.59□□□□□ -1.35
TPM3-216ENST00000473036 IGKV2D-30A0A075B6S6 120 aa6.58□□□□□ -1.36
TPM3-216ENST00000473036 LINC00208Q96KT6 92 aa6.58□□□□□ -1.36
TPM3-216ENST00000473036 ANAPC13Q9BS18 74 aa6.58□□□□□ -1.36
TPM3-216ENST00000473036 CYP4F30PQ9H0H9 118 aa6.56□□□□□ -1.36
TPM3-216ENST00000473036 RBM12B-AS1Q9P1G2 102 aa6.56□□□□□ -1.36
TPM3-216ENST00000473036 COX7CP15954 63 aa6.55□□□□□ -1.36
TPM3-216ENST00000473036 NDUFC1O43677 76 aa6.49□□□□□ -1.37
TPM3-216ENST00000473036 C20orf197Q8N268 126 aa6.49□□□□□ -1.37
TPM3-216ENST00000473036 FAM236DA0A1B0GTK5 79 aa6.48□□□□□ -1.37
TPM3-216ENST00000473036 FAM236CP0DP71 79 aa6.48□□□□□ -1.37
TPM3-216ENST00000473036 KLKP1Q107X0 134 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms