RNA–Protein interactions for RNA: ENST00000472677.1

TRABD-206, Transcript of TraB domain containing, humanhuman

TSL 1 (best)

Gene TRABD, Length 1,661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-206ENST00000472677 J3KT08 172 aa11.84□□□□□ -0.51
TRABD-206ENST00000472677 CXCL6P80162 114 aa11.82□□□□□ -0.52
TRABD-206ENST00000472677 ATP5EP2Q5VTU8 51 aa11.82□□□□□ -0.52
TRABD-206ENST00000472677 LRP2P98164 4655 aa11.81□□□□□ -0.52
TRABD-206ENST00000472677 C9orf92A6NGG3 77 aa11.81□□□□□ -0.52
TRABD-206ENST00000472677 DSCR10P59022 87 aa11.81□□□□□ -0.52
TRABD-206ENST00000472677 MT-ATP8P03928 68 aa11.78□□□□□ -0.52
TRABD-206ENST00000472677 Q8N9L7 120 aa11.77□□□□□ -0.53
TRABD-206ENST00000472677 A8MWP4 228 aa11.76□□□□□ -0.53
TRABD-206ENST00000472677 K7EQZ3 153 aa11.75□□□□□ -0.53
TRABD-206ENST00000472677 NDUFB1O75438 58 aa11.74□□□□□ -0.53
TRABD-206ENST00000472677 HIST1H4AP62805 103 aaKnown RBP11.71□□□□□ -0.53
TRABD-206ENST00000472677 PRR15Q8IV56 129 aa11.71□□□□□ -0.54
TRABD-206ENST00000472677 IGHV6-1A0A0B4J1U7 121 aa11.69□□□□□ -0.54
TRABD-206ENST00000472677 A0A1B0GVX0 72 aa11.69□□□□□ -0.54
TRABD-206ENST00000472677 XP32Q5T750 250 aa11.69□□□□□ -0.54
TRABD-206ENST00000472677 IMUPQ9GZP8 106 aa11.65□□□□□ -0.55
TRABD-206ENST00000472677 A0A087WVE0 104 aa11.64□□□□□ -0.55
TRABD-206ENST00000472677 LINC00313P59037 77 aa11.64□□□□□ -0.55
TRABD-206ENST00000472677 UBR4Q5T4S7 5183 aa11.63□□□□□ -0.55
TRABD-206ENST00000472677 NOTCH2NLQ7Z3S9 236 aa11.61□□□□□ -0.55
TRABD-206ENST00000472677 C8orf17Q9NRJ1 99 aa11.6□□□□□ -0.55
TRABD-206ENST00000472677 C8orf87E5RJ46 101 aa11.58□□□□□ -0.56
TRABD-206ENST00000472677 MMP24-AS1A0A0U1RRL7 71 aa11.57□□□□□ -0.56
TRABD-206ENST00000472677 HCG22E2RYF7 251 aa11.56□□□□□ -0.56
TRABD-206ENST00000472677 WFDC13Q8IUB5 93 aa11.55□□□□□ -0.56
TRABD-206ENST00000472677 SEC61BP60468 96 aaKnown RBP11.54□□□□□ -0.56
TRABD-206ENST00000472677 CASC2Q6XLA1 102 aa11.52□□□□□ -0.56
TRABD-206ENST00000472677 hDV103S1A0JD37 113 aa11.52□□□□□ -0.57
TRABD-206ENST00000472677 RPL37P61927 97 aaKnown RBP11.52□□□□□ -0.57
TRABD-206ENST00000472677 KRTAP16-1A8MUX0 517 aa11.49□□□□□ -0.57
TRABD-206ENST00000472677 Q75L30 129 aa11.49□□□□□ -0.57
TRABD-206ENST00000472677 FAM236AA0A1B0GUQ0 79 aa11.47□□□□□ -0.57
TRABD-206ENST00000472677 FAM236BA0A1B0GV22 79 aa11.47□□□□□ -0.57
TRABD-206ENST00000472677 C20orf166-AS1Q96NR2 134 aa11.47□□□□□ -0.57
TRABD-206ENST00000472677 TMEM254Q8TBM7 123 aa11.46□□□□□ -0.57
TRABD-206ENST00000472677 PCOTHQ58A44 107 aa11.46□□□□□ -0.58
TRABD-206ENST00000472677 A8MUU9 505 aa11.45□□□□□ -0.58
TRABD-206ENST00000472677 MRPL34Q9BQ48 92 aaKnown RBP11.45□□□□□ -0.58
TRABD-206ENST00000472677 ATP11AUNQ6ZP68 121 aa11.43□□□□□ -0.58
TRABD-206ENST00000472677 SCGB1A1P11684 91 aa11.41□□□□□ -0.58
TRABD-206ENST00000472677 MUC17Q685J3 4493 aa11.41□□□□□ -0.58
TRABD-206ENST00000472677 NDUFS5O43920 106 aa11.38□□□□□ -0.59
TRABD-206ENST00000472677 RNF213Q63HN8 5207 aa11.37□□□□□ -0.59
TRABD-206ENST00000472677 Q8N9P0 234 aaPredicted RBP11.36□□□□□ -0.59
TRABD-206ENST00000472677 MUC2Q02817 5179 aa11.34□□□□□ -0.59
TRABD-206ENST00000472677 ATOX1O00244 68 aa11.3□□□□□ -0.6
TRABD-206ENST00000472677 KRTAP4-1Q9BYQ7 146 aa11.28□□□□□ -0.6
TRABD-206ENST00000472677 OCR1Q9BZK8 76 aa11.27□□□□□ -0.6
TRABD-206ENST00000472677 TP53AIP1Q9HCN2 124 aa11.26□□□□□ -0.61
TRABD-206ENST00000472677 SMIM20Q8N5G0 67 aa11.24□□□□□ -0.61
TRABD-206ENST00000472677 ZCCHC13Q8WW36 166 aaKnown RBP11.23□□□□□ -0.61
TRABD-206ENST00000472677 UQCRQO14949 82 aa11.2□□□□□ -0.62
TRABD-206ENST00000472677 TRAV7A0A075B6U4 112 aa11.2□□□□□ -0.62
TRABD-206ENST00000472677 Q5W150 140 aa11.18□□□□□ -0.62
TRABD-206ENST00000472677 ANAPC13Q9BS18 74 aa11.16□□□□□ -0.62
TRABD-206ENST00000472677 SERP2Q8N6R1 65 aa11.15□□□□□ -0.62
TRABD-206ENST00000472677 TRAV22A0A0B4J277 110 aa11.14□□□□□ -0.63
TRABD-206ENST00000472677 H0Y9P7 68 aa11.11□□□□□ -0.63
TRABD-206ENST00000472677 A0A0U1RQV1 116 aa11.1□□□□□ -0.63
TRABD-206ENST00000472677 C5orf47Q569G3 176 aa11.1□□□□□ -0.63
TRABD-206ENST00000472677 MP68P56378 58 aa11.07□□□□□ -0.64
TRABD-206ENST00000472677 COX7CP15954 63 aa11.05□□□□□ -0.64
TRABD-206ENST00000472677 SPINK7P58062 85 aa11.04□□□□□ -0.64
TRABD-206ENST00000472677 LINC00208Q96KT6 92 aa11.02□□□□□ -0.64
TRABD-206ENST00000472677 C1orf64Q8NEQ6 169 aa10.99□□□□□ -0.65
TRABD-206ENST00000472677 C20orf197Q8N268 126 aa10.98□□□□□ -0.65
TRABD-206ENST00000472677 IGKV2D-30A0A075B6S6 120 aa10.98□□□□□ -0.65
TRABD-206ENST00000472677 H3BPC8 53 aa10.98□□□□□ -0.65
TRABD-206ENST00000472677 IGKV2-30P06310 120 aa10.98□□□□□ -0.65
TRABD-206ENST00000472677 LOC101927531A0A1B0GV80 90 aa10.95□□□□□ -0.66
TRABD-206ENST00000472677 SNURFQ9Y675 71 aa10.95□□□□□ -0.66
TRABD-206ENST00000472677 COX6B2Q6YFQ2 88 aa10.94□□□□□ -0.66
TRABD-206ENST00000472677 C7orf65Q6ZTY9 151 aa10.93□□□□□ -0.66
TRABD-206ENST00000472677 HRES1P13985 223 aa10.92□□□□□ -0.66
TRABD-206ENST00000472677 CCDC179H3BU77 68 aa10.91□□□□□ -0.66
TRABD-206ENST00000472677 KRTAP19-2Q3LHN2 52 aa10.91□□□□□ -0.66
TRABD-206ENST00000472677 CYP4F30PQ9H0H9 118 aa10.91□□□□□ -0.66
TRABD-206ENST00000472677 FAT4Q6V0I7 4981 aa10.91□□□□□ -0.66
TRABD-206ENST00000472677 RBM12B-AS1Q9P1G2 102 aa10.89□□□□□ -0.67
TRABD-206ENST00000472677 PCP4P48539 62 aa10.88□□□□□ -0.67
TRABD-206ENST00000472677 KLKP1Q107X0 134 aa10.87□□□□□ -0.67
TRABD-206ENST00000472677 LCE2CQ5TA81 110 aa10.85□□□□□ -0.67
TRABD-206ENST00000472677 FAM236DA0A1B0GTK5 79 aa10.84□□□□□ -0.67
TRABD-206ENST00000472677 FAM236CP0DP71 79 aa10.84□□□□□ -0.67
TRABD-206ENST00000472677 MPLKIPQ8TAP9 179 aa10.84□□□□□ -0.67
TRABD-206ENST00000472677 CYSTM1Q9H1C7 97 aa10.79□□□□□ -0.68
TRABD-206ENST00000472677 NDUFC1O43677 76 aa10.73□□□□□ -0.69
TRABD-206ENST00000472677 LCE2AQ5TA79 106 aaPredicted RBP10.72□□□□□ -0.69
TRABD-206ENST00000472677 MT1HP80294 61 aa10.71□□□□□ -0.69
TRABD-206ENST00000472677 C4orf26Q17RF5 130 aa10.71□□□□□ -0.69
TRABD-206ENST00000472677 H7BZZ5 65 aa10.69□□□□□ -0.7
TRABD-206ENST00000472677 M0R2T5 61 aa10.64□□□□□ -0.71
TRABD-206ENST00000472677 FLGP20930 4061 aaPredicted RBP10.59□□□□□ -0.71
TRABD-206ENST00000472677 SPANXA2-OT1Q8N9U9 137 aa10.59□□□□□ -0.71
TRABD-206ENST00000472677 H1FX-AS1Q4G0G2 97 aa10.57□□□□□ -0.72
TRABD-206ENST00000472677 KRTAP3-1Q9BYR8 98 aa10.53□□□□□ -0.72
TRABD-206ENST00000472677 TMEM258P61165 79 aa10.5□□□□□ -0.73
TRABD-206ENST00000472677 DMAC1Q96GE9 116 aa10.5□□□□□ -0.73
TRABD-206ENST00000472677 A8MUN3 132 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms