RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 C21orf62-AS1Q17RA5 79 aa4.78□□□□□ -1.64
SYN3-211ENST00000472027 Q6ZQT0 140 aa4.78□□□□□ -1.64
SYN3-211ENST00000472027 NOTCH2NLQ7Z3S9 236 aa4.78□□□□□ -1.64
SYN3-211ENST00000472027 LOC110117498A0A087WWA1 95 aa4.77□□□□□ -1.65
SYN3-211ENST00000472027 IGHV6-1A0A0B4J1U7 121 aa4.77□□□□□ -1.65
SYN3-211ENST00000472027 KRTAP16-1A8MUX0 517 aa4.77□□□□□ -1.65
SYN3-211ENST00000472027 MT1HP80294 61 aa4.77□□□□□ -1.65
SYN3-211ENST00000472027 A0A1W2PPM0 123 aa4.76□□□□□ -1.65
SYN3-211ENST00000472027 PDE6GP18545 87 aa4.76□□□□□ -1.65
SYN3-211ENST00000472027 C14orf132Q9NPU4 83 aa4.76□□□□□ -1.65
SYN3-211ENST00000472027 A0A1B0GVX0 72 aa4.75□□□□□ -1.65
SYN3-211ENST00000472027 A0A1B0GW54 56 aa4.75□□□□□ -1.65
SYN3-211ENST00000472027 J3KT08 172 aa4.75□□□□□ -1.65
SYN3-211ENST00000472027 KRTAP9-2Q9BYQ4 174 aa4.75□□□□□ -1.65
SYN3-211ENST00000472027 C8orf87E5RJ46 101 aa4.74□□□□□ -1.65
SYN3-211ENST00000472027 COX6B2Q6YFQ2 88 aa4.74□□□□□ -1.65
SYN3-211ENST00000472027 H3BT86 120 aa4.73□□□□□ -1.65
SYN3-211ENST00000472027 MTURNQ8N3F0 131 aa4.73□□□□□ -1.65
SYN3-211ENST00000472027 NDUFB1O75438 58 aa4.71□□□□□ -1.66
SYN3-211ENST00000472027 NREPQ16612 68 aa4.7□□□□□ -1.66
SYN3-211ENST00000472027 SPCS1Q9Y6A9 102 aa4.7□□□□□ -1.66
SYN3-211ENST00000472027 A8MWP4 228 aa4.69□□□□□ -1.66
SYN3-211ENST00000472027 M0R2T5 61 aa4.69□□□□□ -1.66
SYN3-211ENST00000472027 COL5A1-AS1Q5SY13 56 aa4.69□□□□□ -1.66
SYN3-211ENST00000472027 IGKV3D-7A0A0C4DH55 119 aa4.68□□□□□ -1.66
SYN3-211ENST00000472027 KRTAP10-6P60371 365 aaPredicted RBP4.67□□□□□ -1.66
SYN3-211ENST00000472027 C8orf17Q9NRJ1 99 aa4.67□□□□□ -1.66
SYN3-211ENST00000472027 PRR15Q8IV56 129 aa4.66□□□□□ -1.66
SYN3-211ENST00000472027 Q8N9P0 234 aaPredicted RBP4.66□□□□□ -1.66
SYN3-211ENST00000472027 FLGP20930 4061 aaPredicted RBP4.66□□□□□ -1.66
SYN3-211ENST00000472027 ZCCHC13Q8WW36 166 aaKnown RBP4.65□□□□□ -1.67
SYN3-211ENST00000472027 PCP4L1A6NKN8 68 aa4.63□□□□□ -1.67
SYN3-211ENST00000472027 K7EP34 96 aa4.63□□□□□ -1.67
SYN3-211ENST00000472027 HRES1P13985 223 aa4.63□□□□□ -1.67
SYN3-211ENST00000472027 Q6ZVQ6 151 aa4.63□□□□□ -1.67
SYN3-211ENST00000472027 PRO0461Q9UI25 63 aa4.63□□□□□ -1.67
SYN3-211ENST00000472027 BPY2O14599 106 aa4.62□□□□□ -1.67
SYN3-211ENST00000472027 MMP24-AS1A0A0U1RRL7 71 aa4.61□□□□□ -1.67
SYN3-211ENST00000472027 FAM236DA0A1B0GTK5 79 aa4.61□□□□□ -1.67
SYN3-211ENST00000472027 K7EQZ3 153 aa4.61□□□□□ -1.67
SYN3-211ENST00000472027 FAM236CP0DP71 79 aa4.61□□□□□ -1.67
SYN3-211ENST00000472027 SPINK7P58062 85 aa4.61□□□□□ -1.67
SYN3-211ENST00000472027 MPLKIPQ8TAP9 179 aa4.61□□□□□ -1.67
SYN3-211ENST00000472027 MRPL34Q9BQ48 92 aaKnown RBP4.61□□□□□ -1.67
SYN3-211ENST00000472027 RBM12B-AS1Q9P1G2 102 aa4.61□□□□□ -1.67
SYN3-211ENST00000472027 TMEM254Q8TBM7 123 aa4.6□□□□□ -1.67
SYN3-211ENST00000472027 hDV103S1A0JD37 113 aa4.59□□□□□ -1.67
SYN3-211ENST00000472027 GTF2H5Q6ZYL4 71 aa4.59□□□□□ -1.67
SYN3-211ENST00000472027 LINC00846Q9NV44 126 aa4.57□□□□□ -1.68
SYN3-211ENST00000472027 KRTAP9-6A0A140TA67 174 aa4.56□□□□□ -1.68
SYN3-211ENST00000472027 F8W1H4 67 aa4.56□□□□□ -1.68
SYN3-211ENST00000472027 NDUFS5O43920 106 aa4.56□□□□□ -1.68
SYN3-211ENST00000472027 Q8N9L7 120 aa4.56□□□□□ -1.68
SYN3-211ENST00000472027 UBL5Q9BZL1 73 aa4.56□□□□□ -1.68
SYN3-211ENST00000472027 WFDC13Q8IUB5 93 aa4.54□□□□□ -1.68
SYN3-211ENST00000472027 ETDBQ3ZM63 59 aa4.53□□□□□ -1.68
SYN3-211ENST00000472027 CASC2Q6XLA1 102 aa4.53□□□□□ -1.68
SYN3-211ENST00000472027 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
SYN3-211ENST00000472027 HCG22E2RYF7 251 aa4.51□□□□□ -1.69
SYN3-211ENST00000472027 Q5W150 140 aa4.51□□□□□ -1.69
SYN3-211ENST00000472027 CRCT1Q9UGL9 99 aa4.5□□□□□ -1.69
SYN3-211ENST00000472027 FSIP2Q5CZC0 6907 aa4.48□□□□□ -1.69
SYN3-211ENST00000472027 IGKV2D-30A0A075B6S6 120 aa4.47□□□□□ -1.69
SYN3-211ENST00000472027 IGKV2-30P06310 120 aa4.47□□□□□ -1.69
SYN3-211ENST00000472027 CXCL6P80162 114 aa4.47□□□□□ -1.69
SYN3-211ENST00000472027 MT2AP02795 61 aa4.46□□□□□ -1.7
SYN3-211ENST00000472027 C7orf65Q6ZTY9 151 aa4.46□□□□□ -1.7
SYN3-211ENST00000472027 KRTAP4-8Q9BYQ9 185 aa4.46□□□□□ -1.7
SYN3-211ENST00000472027 MT1FP04733 61 aa4.43□□□□□ -1.7
SYN3-211ENST00000472027 H1FX-AS1Q4G0G2 97 aa4.43□□□□□ -1.7
SYN3-211ENST00000472027 ACYP1P07311 99 aa4.42□□□□□ -1.7
SYN3-211ENST00000472027 KRTAP10-10P60014 251 aa4.42□□□□□ -1.7
SYN3-211ENST00000472027 C4orf26Q17RF5 130 aa4.4□□□□□ -1.71
SYN3-211ENST00000472027 TP53AIP1Q9HCN2 124 aa4.4□□□□□ -1.71
SYN3-211ENST00000472027 FAM240AA0A1B0GVK7 77 aa4.39□□□□□ -1.71
SYN3-211ENST00000472027 KRTAP9-3Q9BYQ3 159 aa4.39□□□□□ -1.71
SYN3-211ENST00000472027 A0A1B0GV90 55 aa4.37□□□□□ -1.71
SYN3-211ENST00000472027 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.37□□□□□ -1.71
SYN3-211ENST00000472027 USH2AO75445 5202 aa4.37□□□□□ -1.71
SYN3-211ENST00000472027 ATP5EP2Q5VTU8 51 aa4.35□□□□□ -1.71
SYN3-211ENST00000472027 HIST1H4AP62805 103 aaKnown RBP4.34□□□□□ -1.71
SYN3-211ENST00000472027 KRTAP3-1Q9BYR8 98 aa4.34□□□□□ -1.71
SYN3-211ENST00000472027 C1orf64Q8NEQ6 169 aa4.33□□□□□ -1.72
SYN3-211ENST00000472027 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
SYN3-211ENST00000472027 LINC00643Q86TS7 51 aa4.32□□□□□ -1.72
SYN3-211ENST00000472027 CYP4F30PQ9H0H9 118 aa4.31□□□□□ -1.72
SYN3-211ENST00000472027 SSPOA2VEC9 5147 aa4.31□□□□□ -1.72
SYN3-211ENST00000472027 TRAV22A0A0B4J277 110 aa4.3□□□□□ -1.72
SYN3-211ENST00000472027 A0A087WVE0 104 aa4.29□□□□□ -1.72
SYN3-211ENST00000472027 C5orf47Q569G3 176 aa4.29□□□□□ -1.72
SYN3-211ENST00000472027 LOC101927531A0A1B0GV80 90 aa4.28□□□□□ -1.72
SYN3-211ENST00000472027 UQCRQO14949 82 aa4.28□□□□□ -1.72
SYN3-211ENST00000472027 KRTAP19-1Q8IUB9 90 aa4.28□□□□□ -1.72
SYN3-211ENST00000472027 S4R3F8 94 aa4.28□□□□□ -1.72
SYN3-211ENST00000472027 LCA10Q71F78 164 aa4.26□□□□□ -1.73
SYN3-211ENST00000472027 H0Y9P7 68 aa4.25□□□□□ -1.73
SYN3-211ENST00000472027 LCE3BQ5TA77 95 aa4.25□□□□□ -1.73
SYN3-211ENST00000472027 CSAG1Q6PB30 78 aa4.25□□□□□ -1.73
SYN3-211ENST00000472027 J3QR89 54 aa4.24□□□□□ -1.73
SYN3-211ENST00000472027 ATOX1O00244 68 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms