RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 Q8N9L7 120 aa10.6□□□□□ -0.71
PSPC1-203ENST00000471658 A8MWP4 228 aa10.59□□□□□ -0.71
PSPC1-203ENST00000471658 IGHV6-1A0A0B4J1U7 121 aa10.58□□□□□ -0.72
PSPC1-203ENST00000471658 NOTCH2NLQ7Z3S9 236 aa10.58□□□□□ -0.72
PSPC1-203ENST00000471658 A0A1B0GVX0 72 aa10.58□□□□□ -0.72
PSPC1-203ENST00000471658 K7EQZ3 153 aa10.58□□□□□ -0.72
PSPC1-203ENST00000471658 KRTAP13-3Q3SY46 172 aa10.58□□□□□ -0.72
PSPC1-203ENST00000471658 LINC00643Q86TS7 51 aa10.56□□□□□ -0.72
PSPC1-203ENST00000471658 NDUFB1O75438 58 aa10.55□□□□□ -0.72
PSPC1-203ENST00000471658 PRR15Q8IV56 129 aa10.55□□□□□ -0.72
PSPC1-203ENST00000471658 CXCL6P80162 114 aa10.54□□□□□ -0.72
PSPC1-203ENST00000471658 TPRXLQ17RH7 258 aa10.53□□□□□ -0.72
PSPC1-203ENST00000471658 LINC00313P59037 77 aa10.51□□□□□ -0.73
PSPC1-203ENST00000471658 LRP2P98164 4655 aa10.5□□□□□ -0.73
PSPC1-203ENST00000471658 C8orf17Q9NRJ1 99 aa10.49□□□□□ -0.73
PSPC1-203ENST00000471658 ATP5EP2Q5VTU8 51 aa10.47□□□□□ -0.73
PSPC1-203ENST00000471658 C8orf87E5RJ46 101 aa10.47□□□□□ -0.73
PSPC1-203ENST00000471658 MMP24-AS1A0A0U1RRL7 71 aa10.45□□□□□ -0.74
PSPC1-203ENST00000471658 XP32Q5T750 250 aa10.45□□□□□ -0.74
PSPC1-203ENST00000471658 KRTAP16-1A8MUX0 517 aa10.44□□□□□ -0.74
PSPC1-203ENST00000471658 HIST1H4AP62805 103 aaKnown RBP10.43□□□□□ -0.74
PSPC1-203ENST00000471658 MT-ATP8P03928 68 aa10.42□□□□□ -0.74
PSPC1-203ENST00000471658 WFDC13Q8IUB5 93 aa10.4□□□□□ -0.74
PSPC1-203ENST00000471658 A0A087WVE0 104 aa10.39□□□□□ -0.75
PSPC1-203ENST00000471658 hDV103S1A0JD37 113 aa10.37□□□□□ -0.75
PSPC1-203ENST00000471658 HCG22E2RYF7 251 aa10.36□□□□□ -0.75
PSPC1-203ENST00000471658 CASC2Q6XLA1 102 aa10.36□□□□□ -0.75
PSPC1-203ENST00000471658 TMEM254Q8TBM7 123 aa10.33□□□□□ -0.76
PSPC1-203ENST00000471658 C20orf166-AS1Q96NR2 134 aa10.33□□□□□ -0.76
PSPC1-203ENST00000471658 MRPL34Q9BQ48 92 aaKnown RBP10.33□□□□□ -0.76
PSPC1-203ENST00000471658 A8MUU9 505 aa10.33□□□□□ -0.76
PSPC1-203ENST00000471658 RPL37P61927 97 aaKnown RBP10.3□□□□□ -0.76
PSPC1-203ENST00000471658 Q8N9P0 234 aaPredicted RBP10.3□□□□□ -0.76
PSPC1-203ENST00000471658 Q75L30 129 aa10.29□□□□□ -0.76
PSPC1-203ENST00000471658 MUC17Q685J3 4493 aa10.27□□□□□ -0.77
PSPC1-203ENST00000471658 IMUPQ9GZP8 106 aa10.26□□□□□ -0.77
PSPC1-203ENST00000471658 NDUFS5O43920 106 aa10.25□□□□□ -0.77
PSPC1-203ENST00000471658 UBR4Q5T4S7 5183 aa10.23□□□□□ -0.77
PSPC1-203ENST00000471658 PCOTHQ58A44 107 aa10.22□□□□□ -0.77
PSPC1-203ENST00000471658 ATP11AUNQ6ZP68 121 aa10.18□□□□□ -0.78
PSPC1-203ENST00000471658 SEC61BP60468 96 aaKnown RBP10.18□□□□□ -0.78
PSPC1-203ENST00000471658 Q5W150 140 aa10.15□□□□□ -0.79
PSPC1-203ENST00000471658 ZCCHC13Q8WW36 166 aaKnown RBP10.15□□□□□ -0.79
PSPC1-203ENST00000471658 FAM236AA0A1B0GUQ0 79 aa10.13□□□□□ -0.79
PSPC1-203ENST00000471658 FAM236BA0A1B0GV22 79 aa10.13□□□□□ -0.79
PSPC1-203ENST00000471658 RNF213Q63HN8 5207 aa10.11□□□□□ -0.79
PSPC1-203ENST00000471658 KRTAP4-1Q9BYQ7 146 aa10.1□□□□□ -0.79
PSPC1-203ENST00000471658 SCGB1A1P11684 91 aa10.09□□□□□ -0.79
PSPC1-203ENST00000471658 TP53AIP1Q9HCN2 124 aa10.08□□□□□ -0.8
PSPC1-203ENST00000471658 OCR1Q9BZK8 76 aa10.06□□□□□ -0.8
PSPC1-203ENST00000471658 MUC2Q02817 5179 aa10.03□□□□□ -0.8
PSPC1-203ENST00000471658 UQCRQO14949 82 aa10.01□□□□□ -0.81
PSPC1-203ENST00000471658 TRAV22A0A0B4J277 110 aa9.96□□□□□ -0.81
PSPC1-203ENST00000471658 ATOX1O00244 68 aa9.95□□□□□ -0.82
PSPC1-203ENST00000471658 SPINK7P58062 85 aa9.95□□□□□ -0.82
PSPC1-203ENST00000471658 H0Y9P7 68 aa9.94□□□□□ -0.82
PSPC1-203ENST00000471658 IGKV2D-30A0A075B6S6 120 aa9.93□□□□□ -0.82
PSPC1-203ENST00000471658 IGKV2-30P06310 120 aa9.93□□□□□ -0.82
PSPC1-203ENST00000471658 TRAV7A0A075B6U4 112 aa9.92□□□□□ -0.82
PSPC1-203ENST00000471658 SMIM20Q8N5G0 67 aa9.91□□□□□ -0.82
PSPC1-203ENST00000471658 C5orf47Q569G3 176 aa9.88□□□□□ -0.83
PSPC1-203ENST00000471658 C7orf65Q6ZTY9 151 aa9.86□□□□□ -0.83
PSPC1-203ENST00000471658 LINC00208Q96KT6 92 aa9.86□□□□□ -0.83
PSPC1-203ENST00000471658 HRES1P13985 223 aa9.85□□□□□ -0.83
PSPC1-203ENST00000471658 MP68P56378 58 aa9.85□□□□□ -0.83
PSPC1-203ENST00000471658 C1orf64Q8NEQ6 169 aa9.85□□□□□ -0.83
PSPC1-203ENST00000471658 SERP2Q8N6R1 65 aa9.84□□□□□ -0.83
PSPC1-203ENST00000471658 CYP4F30PQ9H0H9 118 aa9.82□□□□□ -0.84
PSPC1-203ENST00000471658 LOC101927531A0A1B0GV80 90 aa9.82□□□□□ -0.84
PSPC1-203ENST00000471658 H3BPC8 53 aa9.76□□□□□ -0.85
PSPC1-203ENST00000471658 MPLKIPQ8TAP9 179 aa9.76□□□□□ -0.85
PSPC1-203ENST00000471658 ANAPC13Q9BS18 74 aa9.76□□□□□ -0.85
PSPC1-203ENST00000471658 A0A0U1RQV1 116 aa9.74□□□□□ -0.85
PSPC1-203ENST00000471658 KLKP1Q107X0 134 aa9.74□□□□□ -0.85
PSPC1-203ENST00000471658 KRTAP19-2Q3LHN2 52 aa9.74□□□□□ -0.85
PSPC1-203ENST00000471658 COX7CP15954 63 aa9.73□□□□□ -0.85
PSPC1-203ENST00000471658 FAT4Q6V0I7 4981 aa9.72□□□□□ -0.85
PSPC1-203ENST00000471658 C20orf197Q8N268 126 aa9.72□□□□□ -0.85
PSPC1-203ENST00000471658 SNURFQ9Y675 71 aa9.72□□□□□ -0.85
PSPC1-203ENST00000471658 C4orf26Q17RF5 130 aa9.71□□□□□ -0.85
PSPC1-203ENST00000471658 RBM12B-AS1Q9P1G2 102 aa9.68□□□□□ -0.86
PSPC1-203ENST00000471658 LCE2CQ5TA81 110 aa9.67□□□□□ -0.86
PSPC1-203ENST00000471658 FAM236DA0A1B0GTK5 79 aa9.64□□□□□ -0.87
PSPC1-203ENST00000471658 FAM236CP0DP71 79 aa9.64□□□□□ -0.87
PSPC1-203ENST00000471658 COX6B2Q6YFQ2 88 aa9.64□□□□□ -0.87
PSPC1-203ENST00000471658 KRTAP3-1Q9BYR8 98 aa9.61□□□□□ -0.87
PSPC1-203ENST00000471658 CCDC179H3BU77 68 aa9.6□□□□□ -0.87
PSPC1-203ENST00000471658 CYSTM1Q9H1C7 97 aa9.57□□□□□ -0.88
PSPC1-203ENST00000471658 H1FX-AS1Q4G0G2 97 aa9.5□□□□□ -0.89
PSPC1-203ENST00000471658 FLGP20930 4061 aaPredicted RBP9.5□□□□□ -0.89
PSPC1-203ENST00000471658 MT1HP80294 61 aa9.48□□□□□ -0.89
PSPC1-203ENST00000471658 H7BZZ5 65 aa9.45□□□□□ -0.9
PSPC1-203ENST00000471658 NDUFC1O43677 76 aa9.42□□□□□ -0.9
PSPC1-203ENST00000471658 DMAC1Q96GE9 116 aa9.4□□□□□ -0.9
PSPC1-203ENST00000471658 SPANXA2-OT1Q8N9U9 137 aa9.39□□□□□ -0.91
PSPC1-203ENST00000471658 A8MUN3 132 aa9.38□□□□□ -0.91
PSPC1-203ENST00000471658 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
PSPC1-203ENST00000471658 PCP4P48539 62 aa9.36□□□□□ -0.91
PSPC1-203ENST00000471658 M0R2T5 61 aa9.34□□□□□ -0.91
PSPC1-203ENST00000471658 S4R3F8 94 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms