RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 C9orf92A6NGG3 77 aa15.91■□□□□ 0.14
SOD1-203ENST00000470944 LRP2P98164 4655 aa15.9■□□□□ 0.14
SOD1-203ENST00000470944 BPY2O14599 106 aa15.9■□□□□ 0.14
SOD1-203ENST00000470944 DSCR10P59022 87 aa15.9■□□□□ 0.14
SOD1-203ENST00000470944 MT-ATP8P03928 68 aa15.88■□□□□ 0.13
SOD1-203ENST00000470944 A8MWP4 228 aa15.85■□□□□ 0.13
SOD1-203ENST00000470944 IGKV3D-7A0A0C4DH55 119 aa15.85■□□□□ 0.13
SOD1-203ENST00000470944 IGHV6-1A0A0B4J1U7 121 aa15.84■□□□□ 0.13
SOD1-203ENST00000470944 A0A1B0GVX0 72 aa15.83■□□□□ 0.13
SOD1-203ENST00000470944 NOTCH2NLQ7Z3S9 236 aa15.82■□□□□ 0.12
SOD1-203ENST00000470944 K7EQZ3 153 aa15.8■□□□□ 0.12
SOD1-203ENST00000470944 Q8N9L7 120 aa15.8■□□□□ 0.12
SOD1-203ENST00000470944 NDUFB1O75438 58 aa15.79■□□□□ 0.12
SOD1-203ENST00000470944 PRR15Q8IV56 129 aa15.77■□□□□ 0.12
SOD1-203ENST00000470944 LINC00313P59037 77 aa15.74■□□□□ 0.11
SOD1-203ENST00000470944 XP32Q5T750 250 aa15.74■□□□□ 0.11
SOD1-203ENST00000470944 CXCL6P80162 114 aa15.72■□□□□ 0.11
SOD1-203ENST00000470944 LINC00643Q86TS7 51 aa15.71■□□□□ 0.1
SOD1-203ENST00000470944 C8orf87E5RJ46 101 aa15.68■□□□□ 0.1
SOD1-203ENST00000470944 C8orf17Q9NRJ1 99 aa15.67■□□□□ 0.1
SOD1-203ENST00000470944 KRTAP16-1A8MUX0 517 aa15.65■□□□□ 0.1
SOD1-203ENST00000470944 IMUPQ9GZP8 106 aa15.63■□□□□ 0.09
SOD1-203ENST00000470944 ATP5EP2Q5VTU8 51 aa15.63■□□□□ 0.09
SOD1-203ENST00000470944 MMP24-AS1A0A0U1RRL7 71 aa15.62■□□□□ 0.09
SOD1-203ENST00000470944 UBR4Q5T4S7 5183 aa15.57■□□□□ 0.08
SOD1-203ENST00000470944 C20orf166-AS1Q96NR2 134 aa15.53■□□□□ 0.08
SOD1-203ENST00000470944 WFDC13Q8IUB5 93 aa15.51■□□□□ 0.07
SOD1-203ENST00000470944 hDV103S1A0JD37 113 aa15.51■□□□□ 0.07
SOD1-203ENST00000470944 A8MUU9 505 aa15.51■□□□□ 0.07
SOD1-203ENST00000470944 RPL37P61927 97 aaKnown RBP15.51■□□□□ 0.07
SOD1-203ENST00000470944 HIST1H4AP62805 103 aaKnown RBP15.5■□□□□ 0.07
SOD1-203ENST00000470944 Q75L30 129 aa15.49■□□□□ 0.07
SOD1-203ENST00000470944 HCG22E2RYF7 251 aa15.47■□□□□ 0.07
SOD1-203ENST00000470944 CASC2Q6XLA1 102 aa15.47■□□□□ 0.07
SOD1-203ENST00000470944 TMEM254Q8TBM7 123 aa15.46■□□□□ 0.07
SOD1-203ENST00000470944 MRPL34Q9BQ48 92 aaKnown RBP15.45■□□□□ 0.06
SOD1-203ENST00000470944 MUC17Q685J3 4493 aa15.45■□□□□ 0.06
SOD1-203ENST00000470944 A0A087WVE0 104 aa15.43■□□□□ 0.06
SOD1-203ENST00000470944 Q8N9P0 234 aaPredicted RBP15.43■□□□□ 0.06
SOD1-203ENST00000470944 ANAPC13Q9BS18 74 aa15.4■□□□□ 0.06
SOD1-203ENST00000470944 PCOTHQ58A44 107 aa15.38■□□□□ 0.05
SOD1-203ENST00000470944 SEC61BP60468 96 aaKnown RBP15.37■□□□□ 0.05
SOD1-203ENST00000470944 NDUFS5O43920 106 aa15.31■□□□□ 0.04
SOD1-203ENST00000470944 ATP11AUNQ6ZP68 121 aa15.31■□□□□ 0.04
SOD1-203ENST00000470944 FAM236AA0A1B0GUQ0 79 aa15.31■□□□□ 0.04
SOD1-203ENST00000470944 FAM236BA0A1B0GV22 79 aa15.31■□□□□ 0.04
SOD1-203ENST00000470944 RNF213Q63HN8 5207 aa15.26■□□□□ 0.03
SOD1-203ENST00000470944 MUC2Q02817 5179 aa15.25■□□□□ 0.03
SOD1-203ENST00000470944 ZCCHC13Q8WW36 166 aaKnown RBP15.21■□□□□ 0.03
SOD1-203ENST00000470944 KRTAP4-1Q9BYQ7 146 aa15.21■□□□□ 0.03
SOD1-203ENST00000470944 ATOX1O00244 68 aa15.16■□□□□ 0.02
SOD1-203ENST00000470944 Q5W150 140 aa15.14■□□□□ 0.01
SOD1-203ENST00000470944 TP53AIP1Q9HCN2 124 aa15.07■□□□□ 0
SOD1-203ENST00000470944 CCDC179H3BU77 68 aa15.06■□□□□ 0
SOD1-203ENST00000470944 UQCRQO14949 82 aa15.01□□□□□ -0.01
SOD1-203ENST00000470944 COX7CP15954 63 aa15□□□□□ -0.01
SOD1-203ENST00000470944 OCR1Q9BZK8 76 aa14.99□□□□□ -0.01
SOD1-203ENST00000470944 SERP2Q8N6R1 65 aa14.97□□□□□ -0.01
SOD1-203ENST00000470944 SPINK7P58062 85 aa14.93□□□□□ -0.02
SOD1-203ENST00000470944 TRAV22A0A0B4J277 110 aa14.89□□□□□ -0.03
SOD1-203ENST00000470944 SMIM20Q8N5G0 67 aa14.89□□□□□ -0.03
SOD1-203ENST00000470944 IGKV2D-30A0A075B6S6 120 aa14.86□□□□□ -0.03
SOD1-203ENST00000470944 IGKV2-30P06310 120 aa14.86□□□□□ -0.03
SOD1-203ENST00000470944 H0Y9P7 68 aa14.82□□□□□ -0.04
SOD1-203ENST00000470944 TRAV7A0A075B6U4 112 aa14.81□□□□□ -0.04
SOD1-203ENST00000470944 HRES1P13985 223 aa14.79□□□□□ -0.04
SOD1-203ENST00000470944 C7orf65Q6ZTY9 151 aa14.79□□□□□ -0.04
SOD1-203ENST00000470944 C5orf47Q569G3 176 aa14.72□□□□□ -0.05
SOD1-203ENST00000470944 KRTAP19-2Q3LHN2 52 aa14.72□□□□□ -0.05
SOD1-203ENST00000470944 MPLKIPQ8TAP9 179 aa14.69□□□□□ -0.06
SOD1-203ENST00000470944 FAT4Q6V0I7 4981 aa14.68□□□□□ -0.06
SOD1-203ENST00000470944 LOC101927531A0A1B0GV80 90 aa14.68□□□□□ -0.06
SOD1-203ENST00000470944 MP68P56378 58 aa14.68□□□□□ -0.06
SOD1-203ENST00000470944 LINC00208Q96KT6 92 aa14.68□□□□□ -0.06
SOD1-203ENST00000470944 CYP4F30PQ9H0H9 118 aa14.68□□□□□ -0.06
SOD1-203ENST00000470944 C1orf64Q8NEQ6 169 aa14.66□□□□□ -0.06
SOD1-203ENST00000470944 LCE2CQ5TA81 110 aa14.61□□□□□ -0.07
SOD1-203ENST00000470944 C20orf197Q8N268 126 aa14.58□□□□□ -0.08
SOD1-203ENST00000470944 CYSTM1Q9H1C7 97 aa14.58□□□□□ -0.08
SOD1-203ENST00000470944 RBM12B-AS1Q9P1G2 102 aa14.57□□□□□ -0.08
SOD1-203ENST00000470944 KLKP1Q107X0 134 aa14.56□□□□□ -0.08
SOD1-203ENST00000470944 H3BPC8 53 aa14.55□□□□□ -0.08
SOD1-203ENST00000470944 TMEM258P61165 79 aa14.54□□□□□ -0.08
SOD1-203ENST00000470944 C4orf26Q17RF5 130 aa14.54□□□□□ -0.08
SOD1-203ENST00000470944 COX6B2Q6YFQ2 88 aa14.54□□□□□ -0.08
SOD1-203ENST00000470944 A0A0U1RQV1 116 aa14.52□□□□□ -0.09
SOD1-203ENST00000470944 FAM236DA0A1B0GTK5 79 aa14.49□□□□□ -0.09
SOD1-203ENST00000470944 FAM236CP0DP71 79 aa14.49□□□□□ -0.09
SOD1-203ENST00000470944 NDUFC1O43677 76 aa14.44□□□□□ -0.1
SOD1-203ENST00000470944 SNURFQ9Y675 71 aa14.43□□□□□ -0.1
SOD1-203ENST00000470944 H7BZZ5 65 aa14.4□□□□□ -0.1
SOD1-203ENST00000470944 KRTAP3-1Q9BYR8 98 aa14.37□□□□□ -0.11
SOD1-203ENST00000470944 FLGP20930 4061 aaPredicted RBP14.35□□□□□ -0.11
SOD1-203ENST00000470944 MT1HP80294 61 aa14.34□□□□□ -0.11
SOD1-203ENST00000470944 RPS28P62857 69 aaKnown RBP14.3□□□□□ -0.12
SOD1-203ENST00000470944 H1FX-AS1Q4G0G2 97 aa14.26□□□□□ -0.13
SOD1-203ENST00000470944 LCE2AQ5TA79 106 aaPredicted RBP14.26□□□□□ -0.13
SOD1-203ENST00000470944 ATP5EP56381 51 aaPredicted RBP14.22□□□□□ -0.13
SOD1-203ENST00000470944 M0R2T5 61 aa14.1□□□□□ -0.15
SOD1-203ENST00000470944 SERP1Q9Y6X1 66 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms