RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 ATRQ13535 2644 aa1.91□□□□□ -2.1
SCFD1-205ENST00000469043 OTOGQ6ZRI0 2925 aa1.9□□□□□ -2.1
SCFD1-205ENST00000469043 TEP1Q99973 2627 aaKnown RBP1.9□□□□□ -2.1
SCFD1-205ENST00000469043 MYMXA0A1B0GTQ4 84 aa1.9□□□□□ -2.11
SCFD1-205ENST00000469043 D6R8Y8 96 aa1.9□□□□□ -2.11
SCFD1-205ENST00000469043 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.9□□□□□ -2.11
SCFD1-205ENST00000469043 MUSTN1Q8IVN3 82 aa1.9□□□□□ -2.11
SCFD1-205ENST00000469043 MAST4O15021 2626 aa1.89□□□□□ -2.11
SCFD1-205ENST00000469043 TRBV6-1A0A0K0K1D8 114 aa1.89□□□□□ -2.11
SCFD1-205ENST00000469043 LY6G6CO95867 125 aa1.89□□□□□ -2.11
SCFD1-205ENST00000469043 SPINK13Q1W4C9 94 aa1.89□□□□□ -2.11
SCFD1-205ENST00000469043 SPRR4Q96PI1 79 aa1.89□□□□□ -2.11
SCFD1-205ENST00000469043 SMIM11BQ8TCY0 68 aa1.88□□□□□ -2.11
SCFD1-205ENST00000469043 PLAC4Q8WY50 150 aa1.88□□□□□ -2.11
SCFD1-205ENST00000469043 RHPN1-AS1Q9BWJ2 59 aa1.87□□□□□ -2.11
SCFD1-205ENST00000469043 LINC00472Q9H8W2 130 aa1.87□□□□□ -2.11
SCFD1-205ENST00000469043 LINC00846Q9NV44 126 aa1.87□□□□□ -2.11
SCFD1-205ENST00000469043 NIPBLQ6KC79 2804 aaeCLIP1.87□□□□□ -2.11
SCFD1-205ENST00000469043 STAB1Q9NY15 2570 aa1.87□□□□□ -2.11
SCFD1-205ENST00000469043 COL6A5A8TX70 2615 aa1.87□□□□□ -2.11
SCFD1-205ENST00000469043 GVQW2A0A096LPI5 108 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-205ENST00000469043 SMIM27A0A1W2PRY6 76 aa1.86□□□□□ -2.11
SCFD1-205ENST00000469043 Q6ZRX8 168 aa1.86□□□□□ -2.11
SCFD1-205ENST00000469043 CUBNO60494 3623 aa1.85□□□□□ -2.11
SCFD1-205ENST00000469043 SMIM13P0DJ93 91 aa1.85□□□□□ -2.11
SCFD1-205ENST00000469043 SMR3AQ99954 134 aa1.85□□□□□ -2.11
SCFD1-205ENST00000469043 CNFNQ9BYD5 112 aa1.85□□□□□ -2.11
SCFD1-205ENST00000469043 TRAV21A0A0B4J279 112 aa1.84□□□□□ -2.11
SCFD1-205ENST00000469043 A0A1B0GUT8 65 aa1.84□□□□□ -2.11
SCFD1-205ENST00000469043 A8MTW9 85 aa1.84□□□□□ -2.11
SCFD1-205ENST00000469043 RPL37P61927 97 aaKnown RBP1.84□□□□□ -2.11
SCFD1-205ENST00000469043 DEFB136Q30KP8 78 aa1.84□□□□□ -2.11
SCFD1-205ENST00000469043 DEFB114Q30KQ6 69 aa1.84□□□□□ -2.11
SCFD1-205ENST00000469043 TMEM263Q8WUH6 116 aaKnown RBP1.84□□□□□ -2.11
SCFD1-205ENST00000469043 TENM1Q9UKZ4 2725 aa1.83□□□□□ -2.12
SCFD1-205ENST00000469043 CRIP1P50238 77 aa1.83□□□□□ -2.12
SCFD1-205ENST00000469043 UBE2D4Q9Y2X8 147 aa1.83□□□□□ -2.12
SCFD1-205ENST00000469043 MGAM2Q2M2H8 2515 aa1.82□□□□□ -2.12
SCFD1-205ENST00000469043 TRRAPQ9Y4A5 3859 aa1.82□□□□□ -2.12
SCFD1-205ENST00000469043 NOTCH1P46531 2555 aa1.82□□□□□ -2.12
SCFD1-205ENST00000469043 H0Y9P7 68 aa1.82□□□□□ -2.12
SCFD1-205ENST00000469043 DEFB131AP59861 70 aa1.82□□□□□ -2.12
SCFD1-205ENST00000469043 DEFB121Q5J5C9 76 aa1.82□□□□□ -2.12
SCFD1-205ENST00000469043 KRTAP13-1Q8IUC0 172 aa1.82□□□□□ -2.12
SCFD1-205ENST00000469043 WFDC9Q8NEX5 89 aa1.82□□□□□ -2.12
SCFD1-205ENST00000469043 CRCT1Q9UGL9 99 aa1.82□□□□□ -2.12
SCFD1-205ENST00000469043 VWFP04275 2813 aa1.82□□□□□ -2.12
SCFD1-205ENST00000469043 FBN1P35555 2871 aaKnown RBP1.82□□□□□ -2.12
SCFD1-205ENST00000469043 K7EMI3 77 aa1.81□□□□□ -2.12
SCFD1-205ENST00000469043 KRTAP12-4P60329 112 aa1.81□□□□□ -2.12
SCFD1-205ENST00000469043 Q6JHZ5 121 aa1.81□□□□□ -2.12
SCFD1-205ENST00000469043 PLAC8Q9NZF1 115 aa1.81□□□□□ -2.12
SCFD1-205ENST00000469043 NBEAL1Q6ZS30 2694 aa1.81□□□□□ -2.12
SCFD1-205ENST00000469043 CMYA5Q8N3K9 4069 aa1.8□□□□□ -2.12
SCFD1-205ENST00000469043 LINC01549A6NIU2 74 aa1.8□□□□□ -2.12
SCFD1-205ENST00000469043 H3BVH4 76 aa1.8□□□□□ -2.12
SCFD1-205ENST00000469043 SPINK4O60575 86 aa1.8□□□□□ -2.12
SCFD1-205ENST00000469043 HAMPP81172 84 aa1.8□□□□□ -2.12
SCFD1-205ENST00000469043 PKD1L1Q8TDX9 2849 aa1.79□□□□□ -2.12
SCFD1-205ENST00000469043 LINC01546A6NGU7 62 aa1.79□□□□□ -2.12
SCFD1-205ENST00000469043 SPINK7P58062 85 aa1.79□□□□□ -2.12
SCFD1-205ENST00000469043 DEFB1P60022 68 aa1.79□□□□□ -2.12
SCFD1-205ENST00000469043 SPATA8Q6RVD6 105 aa1.79□□□□□ -2.12
SCFD1-205ENST00000469043 ANK2Q01484 3957 aa1.79□□□□□ -2.12
SCFD1-205ENST00000469043 DNAH3Q8TD57 4116 aa1.78□□□□□ -2.12
SCFD1-205ENST00000469043 TIMM8BQ9Y5J9 83 aaPredicted RBP1.78□□□□□ -2.12
SCFD1-205ENST00000469043 NBEAL2Q6ZNJ1 2754 aa1.78□□□□□ -2.12
SCFD1-205ENST00000469043 M0QY20 66 aa1.77□□□□□ -2.13
SCFD1-205ENST00000469043 FCER1GP30273 86 aa1.77□□□□□ -2.13
SCFD1-205ENST00000469043 IFI27P40305 119 aaPredicted RBP1.77□□□□□ -2.13
SCFD1-205ENST00000469043 POLR2KP53803 58 aaKnown RBP1.77□□□□□ -2.13
SCFD1-205ENST00000469043 KRTAP21-3Q3LHN1 58 aa1.77□□□□□ -2.13
SCFD1-205ENST00000469043 SMIM2Q9BVW6 85 aa1.77□□□□□ -2.13
SCFD1-205ENST00000469043 I3L3M4 83 aa1.76□□□□□ -2.13
SCFD1-205ENST00000469043 HTN1P15515 57 aa1.76□□□□□ -2.13
SCFD1-205ENST00000469043 TENM3Q9P273 2699 aa1.76□□□□□ -2.13
SCFD1-205ENST00000469043 STAB2Q8WWQ8 2551 aa1.76□□□□□ -2.13
SCFD1-205ENST00000469043 H3BNG1 76 aa1.75□□□□□ -2.13
SCFD1-205ENST00000469043 K7EIL1 84 aa1.75□□□□□ -2.13
SCFD1-205ENST00000469043 C3orf79P0CE67 100 aa1.75□□□□□ -2.13
SCFD1-205ENST00000469043 SPART-AS1P0CW21 52 aa1.75□□□□□ -2.13
SCFD1-205ENST00000469043 DEFB135Q30KP9 77 aa1.75□□□□□ -2.13
SCFD1-205ENST00000469043 ATP5EP2Q5VTU8 51 aa1.75□□□□□ -2.13
SCFD1-205ENST00000469043 RPL39LQ96EH5 51 aaKnown RBP1.75□□□□□ -2.13
SCFD1-205ENST00000469043 NOP10Q9NPE3 64 aaKnown RBP1.75□□□□□ -2.13
SCFD1-205ENST00000469043 TRBV7-4A0A0J9YYF1 115 aa1.74□□□□□ -2.13
SCFD1-205ENST00000469043 IGIPA6NJ69 53 aa1.74□□□□□ -2.13
SCFD1-205ENST00000469043 PLNP26678 52 aa1.74□□□□□ -2.13
SCFD1-205ENST00000469043 PRO0255Q9UI72 69 aa1.74□□□□□ -2.13
SCFD1-205ENST00000469043 DEFB130BP0DP73 79 aa1.73□□□□□ -2.13
SCFD1-205ENST00000469043 DEFB130AP0DP74 79 aa1.73□□□□□ -2.13
SCFD1-205ENST00000469043 HUWE1Q7Z6Z7 4374 aaKnown RBP1.73□□□□□ -2.13
SCFD1-205ENST00000469043 DNAH9Q9NYC9 4486 aa1.72□□□□□ -2.13
SCFD1-205ENST00000469043 A0A1B0GU69 56 aa1.72□□□□□ -2.13
SCFD1-205ENST00000469043 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
SCFD1-205ENST00000469043 UBE2DNLQ8IWF7 75 aa1.72□□□□□ -2.13
SCFD1-205ENST00000469043 KRTAP4-1Q9BYQ7 146 aa1.72□□□□□ -2.13
SCFD1-205ENST00000469043 PRKDCP78527 4128 aaKnown RBP1.72□□□□□ -2.13
SCFD1-205ENST00000469043 ANGP03950 147 aaKnown RBP1.71□□□□□ -2.14
SCFD1-205ENST00000469043 COX8AP10176 69 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms