RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.67□□□□□ -1.66
HDAC6-216ENST00000468949 J3QR89 54 aa4.66□□□□□ -1.66
HDAC6-216ENST00000468949 PRR4Q16378 134 aa4.65□□□□□ -1.67
HDAC6-216ENST00000468949 Q5XG85 94 aa4.65□□□□□ -1.67
HDAC6-216ENST00000468949 NREPQ16612 68 aa4.64□□□□□ -1.67
HDAC6-216ENST00000468949 RETNLBQ9BQ08 111 aa4.64□□□□□ -1.67
HDAC6-216ENST00000468949 UBL5Q9BZL1 73 aa4.64□□□□□ -1.67
HDAC6-216ENST00000468949 ASB16-AS1Q495Z4 193 aa4.63□□□□□ -1.67
HDAC6-216ENST00000468949 UBR4Q5T4S7 5183 aa4.63□□□□□ -1.67
HDAC6-216ENST00000468949 ACYP1P07311 99 aa4.62□□□□□ -1.67
HDAC6-216ENST00000468949 FP248Q71RG6 208 aaPredicted RBP4.62□□□□□ -1.67
HDAC6-216ENST00000468949 FAM240AA0A1B0GVK7 77 aa4.6□□□□□ -1.67
HDAC6-216ENST00000468949 J3KT08 172 aa4.6□□□□□ -1.67
HDAC6-216ENST00000468949 IGKV4-1P06312 121 aa4.6□□□□□ -1.67
HDAC6-216ENST00000468949 LCE3BQ5TA77 95 aa4.6□□□□□ -1.67
HDAC6-216ENST00000468949 C1orf195Q5TG92 126 aa4.6□□□□□ -1.67
HDAC6-216ENST00000468949 LRP2P98164 4655 aa4.6□□□□□ -1.67
HDAC6-216ENST00000468949 IGLV7-46A0A075B6I9 117 aa4.59□□□□□ -1.67
HDAC6-216ENST00000468949 Q6ZVQ6 151 aa4.59□□□□□ -1.67
HDAC6-216ENST00000468949 ANAPC13Q9BS18 74 aa4.59□□□□□ -1.67
HDAC6-216ENST00000468949 LINC00846Q9NV44 126 aa4.59□□□□□ -1.67
HDAC6-216ENST00000468949 BPY2O14599 106 aa4.58□□□□□ -1.68
HDAC6-216ENST00000468949 NDUFB1O75438 58 aa4.58□□□□□ -1.68
HDAC6-216ENST00000468949 DEFB116Q30KQ4 102 aa4.58□□□□□ -1.68
HDAC6-216ENST00000468949 LCE4AQ5TA78 99 aa4.58□□□□□ -1.68
HDAC6-216ENST00000468949 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
HDAC6-216ENST00000468949 SEC61GP60059 68 aa4.56□□□□□ -1.68
HDAC6-216ENST00000468949 Q96NJ1 140 aa4.56□□□□□ -1.68
HDAC6-216ENST00000468949 LINC00472Q9H8W2 130 aa4.56□□□□□ -1.68
HDAC6-216ENST00000468949 IGHV6-1A0A0B4J1U7 121 aa4.54□□□□□ -1.68
HDAC6-216ENST00000468949 A8MWP4 228 aa4.54□□□□□ -1.68
HDAC6-216ENST00000468949 ATP5EP2Q5VTU8 51 aa4.54□□□□□ -1.68
HDAC6-216ENST00000468949 A0A1B0GVX0 72 aa4.53□□□□□ -1.68
HDAC6-216ENST00000468949 C9orf92A6NGG3 77 aa4.53□□□□□ -1.68
HDAC6-216ENST00000468949 TPRXLQ17RH7 258 aa4.53□□□□□ -1.68
HDAC6-216ENST00000468949 C8orf87E5RJ46 101 aa4.52□□□□□ -1.69
HDAC6-216ENST00000468949 CCDC179H3BU77 68 aa4.51□□□□□ -1.69
HDAC6-216ENST00000468949 DSCR10P59022 87 aa4.51□□□□□ -1.69
HDAC6-216ENST00000468949 LINC00313P59037 77 aa4.51□□□□□ -1.69
HDAC6-216ENST00000468949 CXCL6P80162 114 aa4.51□□□□□ -1.69
HDAC6-216ENST00000468949 LINC00643Q86TS7 51 aa4.51□□□□□ -1.69
HDAC6-216ENST00000468949 IGKV3D-7A0A0C4DH55 119 aa4.5□□□□□ -1.69
HDAC6-216ENST00000468949 K7EQZ3 153 aa4.5□□□□□ -1.69
HDAC6-216ENST00000468949 PRR15Q8IV56 129 aa4.5□□□□□ -1.69
HDAC6-216ENST00000468949 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
HDAC6-216ENST00000468949 MT-ATP8P03928 68 aa4.49□□□□□ -1.69
HDAC6-216ENST00000468949 HIST1H4AP62805 103 aaKnown RBP4.49□□□□□ -1.69
HDAC6-216ENST00000468949 KRTAP13-3Q3SY46 172 aa4.49□□□□□ -1.69
HDAC6-216ENST00000468949 Q8N9L7 120 aa4.49□□□□□ -1.69
HDAC6-216ENST00000468949 LPAP08519 4548 aa4.49□□□□□ -1.69
HDAC6-216ENST00000468949 C8orf17Q9NRJ1 99 aa4.48□□□□□ -1.69
HDAC6-216ENST00000468949 RPS28P62857 69 aaKnown RBP4.47□□□□□ -1.69
HDAC6-216ENST00000468949 KRTAP9-9Q9BYP9 154 aa4.47□□□□□ -1.69
HDAC6-216ENST00000468949 KRTAP9-4Q9BYQ2 154 aa4.47□□□□□ -1.69
HDAC6-216ENST00000468949 V9GYY9 64 aa4.47□□□□□ -1.69
HDAC6-216ENST00000468949 hDV103S1A0JD37 113 aa4.45□□□□□ -1.7
HDAC6-216ENST00000468949 HCG22E2RYF7 251 aa4.45□□□□□ -1.7
HDAC6-216ENST00000468949 NDUFS5O43920 106 aa4.45□□□□□ -1.7
HDAC6-216ENST00000468949 CASC2Q6XLA1 102 aa4.45□□□□□ -1.7
HDAC6-216ENST00000468949 WFDC13Q8IUB5 93 aa4.45□□□□□ -1.7
HDAC6-216ENST00000468949 MMP24-AS1A0A0U1RRL7 71 aa4.44□□□□□ -1.7
HDAC6-216ENST00000468949 TMEM254Q8TBM7 123 aa4.44□□□□□ -1.7
HDAC6-216ENST00000468949 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
HDAC6-216ENST00000468949 MRPL34Q9BQ48 92 aaKnown RBP4.43□□□□□ -1.7
HDAC6-216ENST00000468949 SEC61BP60468 96 aaKnown RBP4.42□□□□□ -1.7
HDAC6-216ENST00000468949 ATP11AUNQ6ZP68 121 aa4.42□□□□□ -1.7
HDAC6-216ENST00000468949 NOTCH2NLQ7Z3S9 236 aa4.42□□□□□ -1.7
HDAC6-216ENST00000468949 RPL37P61927 97 aaKnown RBP4.41□□□□□ -1.7
HDAC6-216ENST00000468949 Q75L30 129 aa4.41□□□□□ -1.7
HDAC6-216ENST00000468949 C20orf166-AS1Q96NR2 134 aa4.4□□□□□ -1.71
HDAC6-216ENST00000468949 A0A087WVE0 104 aa4.39□□□□□ -1.71
HDAC6-216ENST00000468949 A8MUU9 505 aa4.39□□□□□ -1.71
HDAC6-216ENST00000468949 KRTAP16-1A8MUX0 517 aa4.39□□□□□ -1.71
HDAC6-216ENST00000468949 IMUPQ9GZP8 106 aa4.39□□□□□ -1.71
HDAC6-216ENST00000468949 A0A0U1RQV1 116 aa4.37□□□□□ -1.71
HDAC6-216ENST00000468949 Q8N9P0 234 aaPredicted RBP4.37□□□□□ -1.71
HDAC6-216ENST00000468949 C4orf26Q17RF5 130 aa4.36□□□□□ -1.71
HDAC6-216ENST00000468949 PCOTHQ58A44 107 aa4.36□□□□□ -1.71
HDAC6-216ENST00000468949 TP53AIP1Q9HCN2 124 aa4.36□□□□□ -1.71
HDAC6-216ENST00000468949 ZCCHC13Q8WW36 166 aaKnown RBP4.35□□□□□ -1.71
HDAC6-216ENST00000468949 MUC17Q685J3 4493 aa4.34□□□□□ -1.71
HDAC6-216ENST00000468949 FAM236AA0A1B0GUQ0 79 aa4.34□□□□□ -1.71
HDAC6-216ENST00000468949 FAM236BA0A1B0GV22 79 aa4.34□□□□□ -1.71
HDAC6-216ENST00000468949 KRTAP9-3Q9BYQ3 159 aa4.34□□□□□ -1.71
HDAC6-216ENST00000468949 UQCRQO14949 82 aa4.33□□□□□ -1.72
HDAC6-216ENST00000468949 TMEM258P61165 79 aa4.33□□□□□ -1.72
HDAC6-216ENST00000468949 KRTAP4-8A0A0G2JLE6 195 aa4.32□□□□□ -1.72
HDAC6-216ENST00000468949 TRAV22A0A0B4J277 110 aa4.3□□□□□ -1.72
HDAC6-216ENST00000468949 FAM236DA0A1B0GTK5 79 aa4.3□□□□□ -1.72
HDAC6-216ENST00000468949 FAM236CP0DP71 79 aa4.3□□□□□ -1.72
HDAC6-216ENST00000468949 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
HDAC6-216ENST00000468949 MUC2Q02817 5179 aa4.29□□□□□ -1.72
HDAC6-216ENST00000468949 ATOX1O00244 68 aa4.29□□□□□ -1.72
HDAC6-216ENST00000468949 IGKV2D-30A0A075B6S6 120 aa4.28□□□□□ -1.72
HDAC6-216ENST00000468949 IGKV2-30P06310 120 aa4.28□□□□□ -1.72
HDAC6-216ENST00000468949 MP68P56378 58 aa4.28□□□□□ -1.72
HDAC6-216ENST00000468949 C7orf65Q6ZTY9 151 aa4.28□□□□□ -1.72
HDAC6-216ENST00000468949 FAT4Q6V0I7 4981 aa4.28□□□□□ -1.72
HDAC6-216ENST00000468949 H0Y9P7 68 aa4.27□□□□□ -1.73
HDAC6-216ENST00000468949 COX7CP15954 63 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms