RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 ANKRD29Q8N6D5 301 aa7.57□□□□□ -1.2
HDAC6-214ENST00000465269 LINC00846Q9NV44 126 aa7.56□□□□□ -1.2
HDAC6-214ENST00000465269 K7EP34 96 aa7.54□□□□□ -1.2
HDAC6-214ENST00000465269 CD164Q04900 197 aa7.54□□□□□ -1.2
HDAC6-214ENST00000465269 RBM3P98179 157 aaKnown RBP7.53□□□□□ -1.2
HDAC6-214ENST00000465269 KRTAP20-1Q3LI63 56 aa7.53□□□□□ -1.2
HDAC6-214ENST00000465269 ATP11AUNQ6ZP68 121 aa7.52□□□□□ -1.21
HDAC6-214ENST00000465269 Q5XG85 94 aa7.51□□□□□ -1.21
HDAC6-214ENST00000465269 GTF2H5Q6ZYL4 71 aa7.51□□□□□ -1.21
HDAC6-214ENST00000465269 H3BT86 120 aa7.5□□□□□ -1.21
HDAC6-214ENST00000465269 TRBV7-7A0A0K0K1E9 115 aa7.49□□□□□ -1.21
HDAC6-214ENST00000465269 A0A1W2PNM2 257 aa7.49□□□□□ -1.21
HDAC6-214ENST00000465269 SMCPP49901 116 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-214ENST00000465269 TEN1Q86WV5 123 aa7.49□□□□□ -1.21
HDAC6-214ENST00000465269 DSCR8Q96T75 97 aa7.49□□□□□ -1.21
HDAC6-214ENST00000465269 JMJD7-PLA2G4BH0Y9G9 81 aa7.48□□□□□ -1.21
HDAC6-214ENST00000465269 OBSCN-AS1Q96MR7 158 aa7.48□□□□□ -1.21
HDAC6-214ENST00000465269 TRBV7-4A0A0J9YYF1 115 aa7.47□□□□□ -1.21
HDAC6-214ENST00000465269 VPS25Q9BRG1 176 aa7.47□□□□□ -1.21
HDAC6-214ENST00000465269 CCKP06307 115 aa7.46□□□□□ -1.22
HDAC6-214ENST00000465269 Q75L30 129 aa7.46□□□□□ -1.22
HDAC6-214ENST00000465269 C14orf132Q9NPU4 83 aa7.46□□□□□ -1.22
HDAC6-214ENST00000465269 PRO0461Q9UI25 63 aa7.46□□□□□ -1.22
HDAC6-214ENST00000465269 A0A087WSZ3 146 aa7.44□□□□□ -1.22
HDAC6-214ENST00000465269 A0A1B0GV90 55 aa7.44□□□□□ -1.22
HDAC6-214ENST00000465269 C20orf166-AS1Q96NR2 134 aa7.43□□□□□ -1.22
HDAC6-214ENST00000465269 Q6ZQT0 140 aa7.42□□□□□ -1.22
HDAC6-214ENST00000465269 LOC110117498A0A087WWA1 95 aa7.41□□□□□ -1.22
HDAC6-214ENST00000465269 F8W1H4 67 aa7.41□□□□□ -1.22
HDAC6-214ENST00000465269 FAM236DA0A1B0GTK5 79 aa7.39□□□□□ -1.23
HDAC6-214ENST00000465269 FAM236CP0DP71 79 aa7.39□□□□□ -1.23
HDAC6-214ENST00000465269 PDE6GP18545 87 aa7.39□□□□□ -1.23
HDAC6-214ENST00000465269 SS18L2Q9UHA2 77 aa7.39□□□□□ -1.23
HDAC6-214ENST00000465269 ETDBQ3ZM63 59 aa7.35□□□□□ -1.23
HDAC6-214ENST00000465269 Q96NJ1 140 aa7.35□□□□□ -1.23
HDAC6-214ENST00000465269 DEFB116Q30KQ4 102 aa7.34□□□□□ -1.23
HDAC6-214ENST00000465269 MDN1Q9NU22 5596 aa7.33□□□□□ -1.24
HDAC6-214ENST00000465269 A0A1B0GW54 56 aa7.3□□□□□ -1.24
HDAC6-214ENST00000465269 C21orf62-AS1Q17RA5 79 aa7.3□□□□□ -1.24
HDAC6-214ENST00000465269 LINC00472Q9H8W2 130 aa7.3□□□□□ -1.24
HDAC6-214ENST00000465269 KRTAP16-1A8MUX0 517 aa7.29□□□□□ -1.24
HDAC6-214ENST00000465269 IGKV4-1P06312 121 aa7.29□□□□□ -1.24
HDAC6-214ENST00000465269 NREPQ16612 68 aa7.27□□□□□ -1.25
HDAC6-214ENST00000465269 SIGMAR1Q99720 223 aa7.27□□□□□ -1.25
HDAC6-214ENST00000465269 Q8N9P0 234 aaPredicted RBP7.26□□□□□ -1.25
HDAC6-214ENST00000465269 A8MUU9 505 aa7.25□□□□□ -1.25
HDAC6-214ENST00000465269 KMT2DO14686 5537 aa7.25□□□□□ -1.25
HDAC6-214ENST00000465269 HRES1P13985 223 aa7.24□□□□□ -1.25
HDAC6-214ENST00000465269 MPLKIPQ8TAP9 179 aa7.24□□□□□ -1.25
HDAC6-214ENST00000465269 J3KT08 172 aa7.2□□□□□ -1.26
HDAC6-214ENST00000465269 DSCR10P59022 87 aa7.2□□□□□ -1.26
HDAC6-214ENST00000465269 Q6ZVQ6 151 aa7.2□□□□□ -1.26
HDAC6-214ENST00000465269 IGHV6-1A0A0B4J1U7 121 aa7.19□□□□□ -1.26
HDAC6-214ENST00000465269 RBM12B-AS1Q9P1G2 102 aa7.19□□□□□ -1.26
HDAC6-214ENST00000465269 LINC00313P59037 77 aa7.17□□□□□ -1.26
HDAC6-214ENST00000465269 NOTCH2NLQ7Z3S9 236 aa7.17□□□□□ -1.26
HDAC6-214ENST00000465269 UBL5Q9BZL1 73 aa7.17□□□□□ -1.26
HDAC6-214ENST00000465269 A0A1B0GVX0 72 aa7.16□□□□□ -1.26
HDAC6-214ENST00000465269 BPY2O14599 106 aa7.16□□□□□ -1.26
HDAC6-214ENST00000465269 NDUFB1O75438 58 aa7.16□□□□□ -1.26
HDAC6-214ENST00000465269 A8MWP4 228 aa7.15□□□□□ -1.26
HDAC6-214ENST00000465269 IGKV3D-7A0A0C4DH55 119 aa7.14□□□□□ -1.27
HDAC6-214ENST00000465269 ACYP1P07311 99 aa7.12□□□□□ -1.27
HDAC6-214ENST00000465269 C8orf87E5RJ46 101 aa7.11□□□□□ -1.27
HDAC6-214ENST00000465269 K7EQZ3 153 aa7.11□□□□□ -1.27
HDAC6-214ENST00000465269 PRR15Q8IV56 129 aa7.11□□□□□ -1.27
HDAC6-214ENST00000465269 KRTAP2-3P0C7H8 128 aa7.1□□□□□ -1.27
HDAC6-214ENST00000465269 Q8N9L7 120 aa7.1□□□□□ -1.27
HDAC6-214ENST00000465269 KRTAP2-4Q9BYR9 128 aa7.1□□□□□ -1.27
HDAC6-214ENST00000465269 FAM240AA0A1B0GVK7 77 aa7.09□□□□□ -1.27
HDAC6-214ENST00000465269 C8orf17Q9NRJ1 99 aa7.09□□□□□ -1.27
HDAC6-214ENST00000465269 KRTAP5-9P26371 169 aa7.07□□□□□ -1.28
HDAC6-214ENST00000465269 J3QR89 54 aa7.05□□□□□ -1.28
HDAC6-214ENST00000465269 A6NN06 94 aa7.04□□□□□ -1.28
HDAC6-214ENST00000465269 MMP24-AS1A0A0U1RRL7 71 aa7.03□□□□□ -1.28
HDAC6-214ENST00000465269 CXCL6P80162 114 aa7.02□□□□□ -1.29
HDAC6-214ENST00000465269 WFDC13Q8IUB5 93 aa7.01□□□□□ -1.29
HDAC6-214ENST00000465269 hDV103S1A0JD37 113 aa7□□□□□ -1.29
HDAC6-214ENST00000465269 TMEM254Q8TBM7 123 aa6.99□□□□□ -1.29
HDAC6-214ENST00000465269 MRPL34Q9BQ48 92 aaKnown RBP6.99□□□□□ -1.29
HDAC6-214ENST00000465269 CASC2Q6XLA1 102 aa6.98□□□□□ -1.29
HDAC6-214ENST00000465269 LINC00643Q86TS7 51 aa6.98□□□□□ -1.29
HDAC6-214ENST00000465269 NDUFS5O43920 106 aa6.96□□□□□ -1.3
HDAC6-214ENST00000465269 HCG22E2RYF7 251 aa6.95□□□□□ -1.3
HDAC6-214ENST00000465269 K7ERU9 68 aa6.95□□□□□ -1.3
HDAC6-214ENST00000465269 HIST1H4AP62805 103 aaKnown RBP6.95□□□□□ -1.3
HDAC6-214ENST00000465269 ATP5EP2Q5VTU8 51 aa6.95□□□□□ -1.3
HDAC6-214ENST00000465269 ZCCHC13Q8WW36 166 aaKnown RBP6.91□□□□□ -1.3
HDAC6-214ENST00000465269 GPR98Q8WXG9 6306 aa6.9□□□□□ -1.31
HDAC6-214ENST00000465269 MT1BP07438 61 aa6.89□□□□□ -1.31
HDAC6-214ENST00000465269 A0A087WVE0 104 aa6.88□□□□□ -1.31
HDAC6-214ENST00000465269 SPINK7P58062 85 aa6.87□□□□□ -1.31
HDAC6-214ENST00000465269 Q5W150 140 aa6.84□□□□□ -1.31
HDAC6-214ENST00000465269 SPRR2EP22531 72 aa6.83□□□□□ -1.32
HDAC6-214ENST00000465269 SPRR2BP35325 72 aa6.83□□□□□ -1.32
HDAC6-214ENST00000465269 SPRR2AP35326 72 aa6.83□□□□□ -1.32
HDAC6-214ENST00000465269 KRTAP10-5P60370 271 aa6.83□□□□□ -1.32
HDAC6-214ENST00000465269 KRTAP2-2Q9BYT5 123 aa6.83□□□□□ -1.32
HDAC6-214ENST00000465269 KRTAP2-1Q9BYU5 128 aa6.83□□□□□ -1.32
HDAC6-214ENST00000465269 MT-ATP8P03928 68 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms