RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 KRTAP9-6A0A140TA67 174 aa11.9□□□□□ -0.5
PDLIM7-206ENST00000463411 KRTAP19-2Q3LHN2 52 aa11.87□□□□□ -0.51
PDLIM7-206ENST00000463411 MT1HP80294 61 aa11.83□□□□□ -0.52
PDLIM7-206ENST00000463411 LCE2DQ5TA82 110 aaPredicted RBP11.82□□□□□ -0.52
PDLIM7-206ENST00000463411 Q96NJ1 140 aa11.8□□□□□ -0.52
PDLIM7-206ENST00000463411 LINC00472Q9H8W2 130 aa11.78□□□□□ -0.52
PDLIM7-206ENST00000463411 COX6B2Q6YFQ2 88 aa11.76□□□□□ -0.53
PDLIM7-206ENST00000463411 FAM240AA0A1B0GVK7 77 aa11.73□□□□□ -0.53
PDLIM7-206ENST00000463411 ACYP1P07311 99 aa11.72□□□□□ -0.53
PDLIM7-206ENST00000463411 NREPQ16612 68 aa11.72□□□□□ -0.53
PDLIM7-206ENST00000463411 LINC00846Q9NV44 126 aa11.71□□□□□ -0.53
PDLIM7-206ENST00000463411 J3KT08 172 aa11.7□□□□□ -0.54
PDLIM7-206ENST00000463411 ATP11AUNQ6ZP68 121 aa11.7□□□□□ -0.54
PDLIM7-206ENST00000463411 M0R2T5 61 aa11.69□□□□□ -0.54
PDLIM7-206ENST00000463411 Q6ZVQ6 151 aa11.68□□□□□ -0.54
PDLIM7-206ENST00000463411 Q75L30 129 aa11.68□□□□□ -0.54
PDLIM7-206ENST00000463411 IGKV4-1P06312 121 aa11.67□□□□□ -0.54
PDLIM7-206ENST00000463411 UBL5Q9BZL1 73 aa11.67□□□□□ -0.54
PDLIM7-206ENST00000463411 J3QR89 54 aa11.66□□□□□ -0.54
PDLIM7-206ENST00000463411 SIGMAR1Q99720 223 aa11.64□□□□□ -0.55
PDLIM7-206ENST00000463411 KRTAP10-6P60371 365 aaPredicted RBP11.62□□□□□ -0.55
PDLIM7-206ENST00000463411 DEFB116Q30KQ4 102 aa11.62□□□□□ -0.55
PDLIM7-206ENST00000463411 LORP23490 312 aaPredicted RBP11.6□□□□□ -0.55
PDLIM7-206ENST00000463411 BPY2O14599 106 aa11.57□□□□□ -0.56
PDLIM7-206ENST00000463411 CRCT1Q9UGL9 99 aa11.57□□□□□ -0.56
PDLIM7-206ENST00000463411 A8MWP4 228 aa11.56□□□□□ -0.56
PDLIM7-206ENST00000463411 NDUFB1O75438 58 aa11.55□□□□□ -0.56
PDLIM7-206ENST00000463411 A0A1B0GVX0 72 aa11.54□□□□□ -0.56
PDLIM7-206ENST00000463411 DSCR10P59022 87 aa11.54□□□□□ -0.56
PDLIM7-206ENST00000463411 K7ERU9 68 aa11.53□□□□□ -0.56
PDLIM7-206ENST00000463411 C20orf166-AS1Q96NR2 134 aa11.53□□□□□ -0.56
PDLIM7-206ENST00000463411 FSIP2Q5CZC0 6907 aa11.51□□□□□ -0.57
PDLIM7-206ENST00000463411 IGKV3D-7A0A0C4DH55 119 aa11.5□□□□□ -0.57
PDLIM7-206ENST00000463411 C8orf87E5RJ46 101 aa11.5□□□□□ -0.57
PDLIM7-206ENST00000463411 CXCL6P80162 114 aa11.5□□□□□ -0.57
PDLIM7-206ENST00000463411 PRR15Q8IV56 129 aa11.5□□□□□ -0.57
PDLIM7-206ENST00000463411 FLGP20930 4061 aaPredicted RBP11.5□□□□□ -0.57
PDLIM7-206ENST00000463411 A8MUU9 505 aa11.49□□□□□ -0.57
PDLIM7-206ENST00000463411 ATP5EP2Q5VTU8 51 aa11.48□□□□□ -0.57
PDLIM7-206ENST00000463411 IGHV6-1A0A0B4J1U7 121 aa11.47□□□□□ -0.57
PDLIM7-206ENST00000463411 LINC00313P59037 77 aa11.47□□□□□ -0.57
PDLIM7-206ENST00000463411 LINC00643Q86TS7 51 aa11.46□□□□□ -0.57
PDLIM7-206ENST00000463411 K7EQZ3 153 aa11.45□□□□□ -0.58
PDLIM7-206ENST00000463411 C8orf17Q9NRJ1 99 aa11.42□□□□□ -0.58
PDLIM7-206ENST00000463411 NOTCH2NLQ7Z3S9 236 aa11.41□□□□□ -0.58
PDLIM7-206ENST00000463411 KRTAP16-1A8MUX0 517 aa11.4□□□□□ -0.58
PDLIM7-206ENST00000463411 Q8N9L7 120 aa11.38□□□□□ -0.59
PDLIM7-206ENST00000463411 MMP24-AS1A0A0U1RRL7 71 aa11.37□□□□□ -0.59
PDLIM7-206ENST00000463411 TMEM254Q8TBM7 123 aa11.32□□□□□ -0.6
PDLIM7-206ENST00000463411 hDV103S1A0JD37 113 aa11.29□□□□□ -0.6
PDLIM7-206ENST00000463411 HCG22E2RYF7 251 aa11.28□□□□□ -0.6
PDLIM7-206ENST00000463411 Q8N9P0 234 aaPredicted RBP11.28□□□□□ -0.6
PDLIM7-206ENST00000463411 MRPL34Q9BQ48 92 aaKnown RBP11.27□□□□□ -0.61
PDLIM7-206ENST00000463411 CASC2Q6XLA1 102 aa11.26□□□□□ -0.61
PDLIM7-206ENST00000463411 FAM236DA0A1B0GTK5 79 aa11.25□□□□□ -0.61
PDLIM7-206ENST00000463411 FAM236CP0DP71 79 aa11.25□□□□□ -0.61
PDLIM7-206ENST00000463411 WFDC13Q8IUB5 93 aa11.23□□□□□ -0.61
PDLIM7-206ENST00000463411 HIST1H4AP62805 103 aaKnown RBP11.22□□□□□ -0.61
PDLIM7-206ENST00000463411 RBM12B-AS1Q9P1G2 102 aa11.2□□□□□ -0.62
PDLIM7-206ENST00000463411 IMUPQ9GZP8 106 aa11.19□□□□□ -0.62
PDLIM7-206ENST00000463411 MT-ATP8P03928 68 aa11.15□□□□□ -0.62
PDLIM7-206ENST00000463411 A0A087WVE0 104 aa11.13□□□□□ -0.63
PDLIM7-206ENST00000463411 HRES1P13985 223 aa11.13□□□□□ -0.63
PDLIM7-206ENST00000463411 KRTAP9-8Q9BYQ0 159 aa11.13□□□□□ -0.63
PDLIM7-206ENST00000463411 MPLKIPQ8TAP9 179 aa11.1□□□□□ -0.63
PDLIM7-206ENST00000463411 ZCCHC13Q8WW36 166 aaKnown RBP11.1□□□□□ -0.63
PDLIM7-206ENST00000463411 NDUFS5O43920 106 aa11.09□□□□□ -0.63
PDLIM7-206ENST00000463411 TP53AIP1Q9HCN2 124 aa11.06□□□□□ -0.64
PDLIM7-206ENST00000463411 MT2AP02795 61 aa10.99□□□□□ -0.65
PDLIM7-206ENST00000463411 SPINK7P58062 85 aa10.96□□□□□ -0.65
PDLIM7-206ENST00000463411 Q5W150 140 aa10.96□□□□□ -0.65
PDLIM7-206ENST00000463411 UQCRQO14949 82 aa10.93□□□□□ -0.66
PDLIM7-206ENST00000463411 OCR1Q9BZK8 76 aa10.92□□□□□ -0.66
PDLIM7-206ENST00000463411 FAM236AA0A1B0GUQ0 79 aa10.9□□□□□ -0.66
PDLIM7-206ENST00000463411 FAM236BA0A1B0GV22 79 aa10.9□□□□□ -0.66
PDLIM7-206ENST00000463411 MT1FP04733 61 aa10.89□□□□□ -0.67
PDLIM7-206ENST00000463411 SCGB1A1P11684 91 aa10.89□□□□□ -0.67
PDLIM7-206ENST00000463411 KRTAP10-10P60014 251 aa10.89□□□□□ -0.67
PDLIM7-206ENST00000463411 TRAV22A0A0B4J277 110 aa10.87□□□□□ -0.67
PDLIM7-206ENST00000463411 USH2AO75445 5202 aa10.86□□□□□ -0.67
PDLIM7-206ENST00000463411 SMIM20Q8N5G0 67 aa10.84□□□□□ -0.67
PDLIM7-206ENST00000463411 C7orf65Q6ZTY9 151 aa10.81□□□□□ -0.68
PDLIM7-206ENST00000463411 SSPOA2VEC9 5147 aa10.8□□□□□ -0.68
PDLIM7-206ENST00000463411 ATOX1O00244 68 aa10.8□□□□□ -0.68
PDLIM7-206ENST00000463411 IGKV2-30P06310 120 aa10.79□□□□□ -0.68
PDLIM7-206ENST00000463411 KRTAP9-3Q9BYQ3 159 aa10.79□□□□□ -0.68
PDLIM7-206ENST00000463411 H0Y9P7 68 aa10.78□□□□□ -0.68
PDLIM7-206ENST00000463411 C5orf47Q569G3 176 aa10.78□□□□□ -0.68
PDLIM7-206ENST00000463411 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.77□□□□□ -0.69
PDLIM7-206ENST00000463411 LCE2BO14633 110 aa10.77□□□□□ -0.69
PDLIM7-206ENST00000463411 IGKV2D-30A0A075B6S6 120 aa10.76□□□□□ -0.69
PDLIM7-206ENST00000463411 TRAV7A0A075B6U4 112 aa10.76□□□□□ -0.69
PDLIM7-206ENST00000463411 LOC101927531A0A1B0GV80 90 aa10.74□□□□□ -0.69
PDLIM7-206ENST00000463411 MP68P56378 58 aa10.73□□□□□ -0.69
PDLIM7-206ENST00000463411 H3BPC8 53 aa10.72□□□□□ -0.69
PDLIM7-206ENST00000463411 KRTAP9-7A8MTY7 169 aa10.69□□□□□ -0.7
PDLIM7-206ENST00000463411 CYP4F30PQ9H0H9 118 aa10.69□□□□□ -0.7
PDLIM7-206ENST00000463411 KRTAP19-1Q8IUB9 90 aa10.68□□□□□ -0.7
PDLIM7-206ENST00000463411 C1orf64Q8NEQ6 169 aa10.67□□□□□ -0.7
PDLIM7-206ENST00000463411 LINC00208Q96KT6 92 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms