RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 DSCR10P59022 87 aa4.68□□□□□ -1.66
BRCA1-207ENST00000461798 LINC00313P59037 77 aa4.68□□□□□ -1.66
BRCA1-207ENST00000461798 LINC00472Q9H8W2 130 aa4.68□□□□□ -1.66
BRCA1-207ENST00000461798 KRTAP16-1A8MUX0 517 aa4.67□□□□□ -1.66
BRCA1-207ENST00000461798 K7ERJ3 54 aa4.67□□□□□ -1.66
BRCA1-207ENST00000461798 PSMB2P49721 201 aa4.67□□□□□ -1.66
BRCA1-207ENST00000461798 UBE2V1Q13404 147 aa4.67□□□□□ -1.66
BRCA1-207ENST00000461798 TRBV20-1A0A075B6N2 111 aa4.66□□□□□ -1.66
BRCA1-207ENST00000461798 IGKV4-1P06312 121 aa4.66□□□□□ -1.66
BRCA1-207ENST00000461798 SIGMAR1Q99720 223 aa4.66□□□□□ -1.66
BRCA1-207ENST00000461798 TRACP01848 142 aa4.65□□□□□ -1.67
BRCA1-207ENST00000461798 UQCR10Q9UDW1 63 aa4.65□□□□□ -1.67
BRCA1-207ENST00000461798 CCKP06307 115 aa4.64□□□□□ -1.67
BRCA1-207ENST00000461798 NOTCH2NLQ7Z3S9 236 aa4.64□□□□□ -1.67
BRCA1-207ENST00000461798 MPLKIPQ8TAP9 179 aa4.63□□□□□ -1.67
BRCA1-207ENST00000461798 A0A1B0GV72 72 aa4.61□□□□□ -1.67
BRCA1-207ENST00000461798 RBM3P98179 157 aaKnown RBP4.61□□□□□ -1.67
BRCA1-207ENST00000461798 DEFB116Q30KQ4 102 aa4.61□□□□□ -1.67
BRCA1-207ENST00000461798 C8orf87E5RJ46 101 aa4.6□□□□□ -1.67
BRCA1-207ENST00000461798 SCGB1C2P0DMR2 95 aa4.6□□□□□ -1.67
BRCA1-207ENST00000461798 HRES1P13985 223 aa4.6□□□□□ -1.67
BRCA1-207ENST00000461798 C21orf62-AS1Q17RA5 79 aa4.6□□□□□ -1.67
BRCA1-207ENST00000461798 IGHV6-1A0A0B4J1U7 121 aa4.59□□□□□ -1.67
BRCA1-207ENST00000461798 A0A1B0GVX0 72 aa4.59□□□□□ -1.67
BRCA1-207ENST00000461798 BAALC-AS2P0C853 105 aa4.59□□□□□ -1.67
BRCA1-207ENST00000461798 DSCR8Q96T75 97 aa4.59□□□□□ -1.67
BRCA1-207ENST00000461798 C9JAW5 83 aa4.57□□□□□ -1.68
BRCA1-207ENST00000461798 J3KT08 172 aa4.57□□□□□ -1.68
BRCA1-207ENST00000461798 VPS25Q9BRG1 176 aa4.57□□□□□ -1.68
BRCA1-207ENST00000461798 RBM12B-AS1Q9P1G2 102 aa4.57□□□□□ -1.68
BRCA1-207ENST00000461798 A0A1B0GW54 56 aa4.56□□□□□ -1.68
BRCA1-207ENST00000461798 Q6ZQT0 140 aa4.56□□□□□ -1.68
BRCA1-207ENST00000461798 FAM236DA0A1B0GTK5 79 aa4.55□□□□□ -1.68
BRCA1-207ENST00000461798 MT2AP02795 61 aa4.55□□□□□ -1.68
BRCA1-207ENST00000461798 FAM236CP0DP71 79 aa4.55□□□□□ -1.68
BRCA1-207ENST00000461798 JMJD7-PLA2G4BH0Y9G9 81 aa4.54□□□□□ -1.68
BRCA1-207ENST00000461798 TMA7Q9Y2S6 64 aaKnown RBP4.54□□□□□ -1.68
BRCA1-207ENST00000461798 LOC110117498A0A087WWA1 95 aa4.53□□□□□ -1.68
BRCA1-207ENST00000461798 Q8N9P0 234 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-207ENST00000461798 ZCCHC13Q8WW36 166 aaKnown RBP4.53□□□□□ -1.68
BRCA1-207ENST00000461798 M0R143 59 aa4.52□□□□□ -1.69
BRCA1-207ENST00000461798 NDUFB1O75438 58 aa4.52□□□□□ -1.69
BRCA1-207ENST00000461798 PDE6GP18545 87 aa4.52□□□□□ -1.69
BRCA1-207ENST00000461798 ATXN8Q156A1 80 aa4.52□□□□□ -1.69
BRCA1-207ENST00000461798 SPINK7P58062 85 aa4.51□□□□□ -1.69
BRCA1-207ENST00000461798 MTURNQ8N3F0 131 aa4.51□□□□□ -1.69
BRCA1-207ENST00000461798 USH2AO75445 5202 aa4.5□□□□□ -1.69
BRCA1-207ENST00000461798 A8MWP4 228 aa4.5□□□□□ -1.69
BRCA1-207ENST00000461798 MT1FP04733 61 aa4.5□□□□□ -1.69
BRCA1-207ENST00000461798 KRTAP5-11Q6L8G4 156 aa4.49□□□□□ -1.69
BRCA1-207ENST00000461798 C8orf17Q9NRJ1 99 aa4.49□□□□□ -1.69
BRCA1-207ENST00000461798 IGKV3D-7A0A0C4DH55 119 aa4.48□□□□□ -1.69
BRCA1-207ENST00000461798 NAA38Q9BRA0 125 aaKnown RBP4.48□□□□□ -1.69
BRCA1-207ENST00000461798 SSPOA2VEC9 5147 aa4.47□□□□□ -1.69
BRCA1-207ENST00000461798 KRTAP10-10P60014 251 aa4.46□□□□□ -1.7
BRCA1-207ENST00000461798 Q6ZVQ6 151 aa4.46□□□□□ -1.7
BRCA1-207ENST00000461798 PRR15Q8IV56 129 aa4.46□□□□□ -1.7
BRCA1-207ENST00000461798 C14orf132Q9NPU4 83 aa4.46□□□□□ -1.7
BRCA1-207ENST00000461798 SMIM6P0DI80 62 aa4.45□□□□□ -1.7
BRCA1-207ENST00000461798 LYRM7Q5U5X0 104 aa4.45□□□□□ -1.7
BRCA1-207ENST00000461798 NREPQ16612 68 aa4.44□□□□□ -1.7
BRCA1-207ENST00000461798 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
BRCA1-207ENST00000461798 TMEM254Q8TBM7 123 aa4.43□□□□□ -1.7
BRCA1-207ENST00000461798 WFDC13Q8IUB5 93 aa4.42□□□□□ -1.7
BRCA1-207ENST00000461798 MRPL34Q9BQ48 92 aaKnown RBP4.42□□□□□ -1.7
BRCA1-207ENST00000461798 MMP24-AS1A0A0U1RRL7 71 aa4.41□□□□□ -1.7
BRCA1-207ENST00000461798 TSTD3H0UI37 97 aa4.4□□□□□ -1.71
BRCA1-207ENST00000461798 H3BT86 120 aa4.4□□□□□ -1.71
BRCA1-207ENST00000461798 KRTAP10-7P60409 375 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-207ENST00000461798 FCGBPQ9Y6R7 5405 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-207ENST00000461798 C9orf118A6NHY6 69 aa4.39□□□□□ -1.71
BRCA1-207ENST00000461798 hDV103S1A0JD37 113 aa4.38□□□□□ -1.71
BRCA1-207ENST00000461798 K7EQZ3 153 aa4.38□□□□□ -1.71
BRCA1-207ENST00000461798 TAX1BP3O14907 124 aa4.37□□□□□ -1.71
BRCA1-207ENST00000461798 BATFQ16520 125 aa4.37□□□□□ -1.71
BRCA1-207ENST00000461798 H1FX-AS1Q4G0G2 97 aa4.37□□□□□ -1.71
BRCA1-207ENST00000461798 A0A1W2PPM0 123 aa4.36□□□□□ -1.71
BRCA1-207ENST00000461798 BPY2O14599 106 aa4.35□□□□□ -1.71
BRCA1-207ENST00000461798 KRTAP19-6Q3LI70 58 aa4.35□□□□□ -1.71
BRCA1-207ENST00000461798 NDUFS5O43920 106 aa4.34□□□□□ -1.71
BRCA1-207ENST00000461798 Q5W150 140 aa4.34□□□□□ -1.71
BRCA1-207ENST00000461798 LINC00846Q9NV44 126 aa4.33□□□□□ -1.72
BRCA1-207ENST00000461798 IGKV2D-30A0A075B6S6 120 aa4.31□□□□□ -1.72
BRCA1-207ENST00000461798 LOC105371267A0A1B0GV96 52 aa4.31□□□□□ -1.72
BRCA1-207ENST00000461798 IGKV2-30P06310 120 aa4.31□□□□□ -1.72
BRCA1-207ENST00000461798 C7orf65Q6ZTY9 151 aa4.31□□□□□ -1.72
BRCA1-207ENST00000461798 CASC2Q6XLA1 102 aa4.3□□□□□ -1.72
BRCA1-207ENST00000461798 CXCL6P80162 114 aa4.29□□□□□ -1.72
BRCA1-207ENST00000461798 Q8N9L7 120 aa4.29□□□□□ -1.72
BRCA1-207ENST00000461798 SPCS1Q9Y6A9 102 aa4.29□□□□□ -1.72
BRCA1-207ENST00000461798 HCG22E2RYF7 251 aa4.28□□□□□ -1.72
BRCA1-207ENST00000461798 MACF1Q9UPN3 7388 aaKnown RBP4.25□□□□□ -1.73
BRCA1-207ENST00000461798 C4orf26Q17RF5 130 aa4.25□□□□□ -1.73
BRCA1-207ENST00000461798 PRO0461Q9UI25 63 aa4.25□□□□□ -1.73
BRCA1-207ENST00000461798 UBL5Q9BZL1 73 aa4.24□□□□□ -1.73
BRCA1-207ENST00000461798 COL5A1-AS1Q5SY13 56 aa4.22□□□□□ -1.73
BRCA1-207ENST00000461798 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.74
BRCA1-207ENST00000461798 K7EP34 96 aa4.21□□□□□ -1.74
BRCA1-207ENST00000461798 TP53AIP1Q9HCN2 124 aa4.19□□□□□ -1.74
BRCA1-207ENST00000461798 C5orf47Q569G3 176 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 360.2 ms