RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 LIMD2Q9BT23 127 aa8.34□□□□□ -1.07
COL16A1-206ENST00000461217 A0A087WSZ3 146 aa8.33□□□□□ -1.08
COL16A1-206ENST00000461217 UBL5Q9BZL1 73 aa8.33□□□□□ -1.08
COL16A1-206ENST00000461217 LINC00846Q9NV44 126 aa8.31□□□□□ -1.08
COL16A1-206ENST00000461217 NREPQ16612 68 aa8.3□□□□□ -1.08
COL16A1-206ENST00000461217 C9orf92A6NGG3 77 aa8.28□□□□□ -1.08
COL16A1-206ENST00000461217 Q5XG85 94 aa8.28□□□□□ -1.08
COL16A1-206ENST00000461217 Q6ZVQ6 151 aa8.26□□□□□ -1.09
COL16A1-206ENST00000461217 PCOTHQ58A44 107 aa8.25□□□□□ -1.09
COL16A1-206ENST00000461217 LINC00643Q86TS7 51 aa8.23□□□□□ -1.09
COL16A1-206ENST00000461217 J3KT08 172 aa8.22□□□□□ -1.09
COL16A1-206ENST00000461217 LCE2CQ5TA81 110 aa8.21□□□□□ -1.1
COL16A1-206ENST00000461217 ATP5EP2Q5VTU8 51 aa8.21□□□□□ -1.1
COL16A1-206ENST00000461217 BPY2O14599 106 aa8.2□□□□□ -1.1
COL16A1-206ENST00000461217 SIGMAR1Q99720 223 aa8.19□□□□□ -1.1
COL16A1-206ENST00000461217 LINC00472Q9H8W2 130 aa8.19□□□□□ -1.1
COL16A1-206ENST00000461217 CXCL6P80162 114 aa8.17□□□□□ -1.1
COL16A1-206ENST00000461217 MT1HP80294 61 aa8.16□□□□□ -1.1
COL16A1-206ENST00000461217 KRTAP19-2Q3LHN2 52 aa8.16□□□□□ -1.1
COL16A1-206ENST00000461217 IGKV4-1P06312 121 aa8.15□□□□□ -1.1
COL16A1-206ENST00000461217 C1orf195Q5TG92 126 aa8.15□□□□□ -1.1
COL16A1-206ENST00000461217 Q96NJ1 140 aa8.15□□□□□ -1.1
COL16A1-206ENST00000461217 DEFB116Q30KQ4 102 aa8.14□□□□□ -1.11
COL16A1-206ENST00000461217 CRCT1Q9UGL9 99 aa8.14□□□□□ -1.11
COL16A1-206ENST00000461217 IGKV3D-7A0A0C4DH55 119 aa8.13□□□□□ -1.11
COL16A1-206ENST00000461217 NDUFB1O75438 58 aa8.13□□□□□ -1.11
COL16A1-206ENST00000461217 A8MWP4 228 aa8.1□□□□□ -1.11
COL16A1-206ENST00000461217 DSCR10P59022 87 aa8.09□□□□□ -1.11
COL16A1-206ENST00000461217 RPL37P61927 97 aaKnown RBP8.09□□□□□ -1.11
COL16A1-206ENST00000461217 M0R2T5 61 aa8.08□□□□□ -1.12
COL16A1-206ENST00000461217 COX6B2Q6YFQ2 88 aa8.08□□□□□ -1.12
COL16A1-206ENST00000461217 MT-ATP8P03928 68 aa8.07□□□□□ -1.12
COL16A1-206ENST00000461217 IMUPQ9GZP8 106 aa8.07□□□□□ -1.12
COL16A1-206ENST00000461217 FSIP2Q5CZC0 6907 aa8.06□□□□□ -1.12
COL16A1-206ENST00000461217 A0A1B0GVX0 72 aa8.06□□□□□ -1.12
COL16A1-206ENST00000461217 HIST1H4AP62805 103 aaKnown RBP8.06□□□□□ -1.12
COL16A1-206ENST00000461217 PRR15Q8IV56 129 aa8.06□□□□□ -1.12
COL16A1-206ENST00000461217 K7EQZ3 153 aa8.04□□□□□ -1.12
COL16A1-206ENST00000461217 IGHV6-1A0A0B4J1U7 121 aa8.03□□□□□ -1.12
COL16A1-206ENST00000461217 C8orf87E5RJ46 101 aa8.03□□□□□ -1.12
COL16A1-206ENST00000461217 KRTAP10-6P60371 365 aaPredicted RBP8.03□□□□□ -1.12
COL16A1-206ENST00000461217 Q8N9L7 120 aa8.03□□□□□ -1.12
COL16A1-206ENST00000461217 LORP23490 312 aaPredicted RBP8.02□□□□□ -1.13
COL16A1-206ENST00000461217 C8orf17Q9NRJ1 99 aa7.98□□□□□ -1.13
COL16A1-206ENST00000461217 LINC00313P59037 77 aa7.97□□□□□ -1.13
COL16A1-206ENST00000461217 HCG22E2RYF7 251 aa7.96□□□□□ -1.14
COL16A1-206ENST00000461217 A0A087WVE0 104 aa7.95□□□□□ -1.14
COL16A1-206ENST00000461217 MMP24-AS1A0A0U1RRL7 71 aa7.94□□□□□ -1.14
COL16A1-206ENST00000461217 CASC2Q6XLA1 102 aa7.94□□□□□ -1.14
COL16A1-206ENST00000461217 ATP11AUNQ6ZP68 121 aa7.94□□□□□ -1.14
COL16A1-206ENST00000461217 hDV103S1A0JD37 113 aa7.93□□□□□ -1.14
COL16A1-206ENST00000461217 WFDC13Q8IUB5 93 aa7.92□□□□□ -1.14
COL16A1-206ENST00000461217 TMEM254Q8TBM7 123 aa7.91□□□□□ -1.14
COL16A1-206ENST00000461217 NOTCH2NLQ7Z3S9 236 aa7.9□□□□□ -1.14
COL16A1-206ENST00000461217 Q75L30 129 aa7.89□□□□□ -1.15
COL16A1-206ENST00000461217 FAM236AA0A1B0GUQ0 79 aa7.88□□□□□ -1.15
COL16A1-206ENST00000461217 FAM236BA0A1B0GV22 79 aa7.88□□□□□ -1.15
COL16A1-206ENST00000461217 SCGB1A1P11684 91 aa7.88□□□□□ -1.15
COL16A1-206ENST00000461217 MRPL34Q9BQ48 92 aaKnown RBP7.88□□□□□ -1.15
COL16A1-206ENST00000461217 KRTAP16-1A8MUX0 517 aa7.85□□□□□ -1.15
COL16A1-206ENST00000461217 NDUFS5O43920 106 aa7.83□□□□□ -1.16
COL16A1-206ENST00000461217 ATOX1O00244 68 aa7.82□□□□□ -1.16
COL16A1-206ENST00000461217 SMIM20Q8N5G0 67 aa7.82□□□□□ -1.16
COL16A1-206ENST00000461217 Q8N9P0 234 aaPredicted RBP7.82□□□□□ -1.16
COL16A1-206ENST00000461217 TP53AIP1Q9HCN2 124 aa7.81□□□□□ -1.16
COL16A1-206ENST00000461217 FLGP20930 4061 aaPredicted RBP7.81□□□□□ -1.16
COL16A1-206ENST00000461217 C20orf166-AS1Q96NR2 134 aa7.8□□□□□ -1.16
COL16A1-206ENST00000461217 A8MUU9 505 aa7.79□□□□□ -1.16
COL16A1-206ENST00000461217 UQCRQO14949 82 aa7.76□□□□□ -1.17
COL16A1-206ENST00000461217 TRAV7A0A075B6U4 112 aa7.74□□□□□ -1.17
COL16A1-206ENST00000461217 OCR1Q9BZK8 76 aa7.74□□□□□ -1.17
COL16A1-206ENST00000461217 SERP2Q8N6R1 65 aa7.7□□□□□ -1.18
COL16A1-206ENST00000461217 ZCCHC13Q8WW36 166 aaKnown RBP7.7□□□□□ -1.18
COL16A1-206ENST00000461217 ANAPC13Q9BS18 74 aa7.7□□□□□ -1.18
COL16A1-206ENST00000461217 LCE2BO14633 110 aa7.69□□□□□ -1.18
COL16A1-206ENST00000461217 TRAV22A0A0B4J277 110 aa7.68□□□□□ -1.18
COL16A1-206ENST00000461217 C5orf47Q569G3 176 aa7.68□□□□□ -1.18
COL16A1-206ENST00000461217 FAM236DA0A1B0GTK5 79 aa7.67□□□□□ -1.18
COL16A1-206ENST00000461217 FAM236CP0DP71 79 aa7.67□□□□□ -1.18
COL16A1-206ENST00000461217 MP68P56378 58 aa7.67□□□□□ -1.18
COL16A1-206ENST00000461217 KRTAP9-8Q9BYQ0 159 aa7.66□□□□□ -1.18
COL16A1-206ENST00000461217 H0Y9P7 68 aa7.65□□□□□ -1.18
COL16A1-206ENST00000461217 H3BPC8 53 aa7.63□□□□□ -1.19
COL16A1-206ENST00000461217 Q5W150 140 aa7.63□□□□□ -1.19
COL16A1-206ENST00000461217 COX7CP15954 63 aa7.62□□□□□ -1.19
COL16A1-206ENST00000461217 LOC101927531A0A1B0GV80 90 aa7.59□□□□□ -1.19
COL16A1-206ENST00000461217 RBM12B-AS1Q9P1G2 102 aa7.59□□□□□ -1.19
COL16A1-206ENST00000461217 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.58□□□□□ -1.2
COL16A1-206ENST00000461217 C1orf64Q8NEQ6 169 aa7.58□□□□□ -1.2
COL16A1-206ENST00000461217 LINC00208Q96KT6 92 aa7.58□□□□□ -1.2
COL16A1-206ENST00000461217 KRTAP9-7A8MTY7 169 aa7.56□□□□□ -1.2
COL16A1-206ENST00000461217 USH2AO75445 5202 aa7.55□□□□□ -1.2
COL16A1-206ENST00000461217 MT2AP02795 61 aa7.55□□□□□ -1.2
COL16A1-206ENST00000461217 IGKV2-30P06310 120 aa7.55□□□□□ -1.2
COL16A1-206ENST00000461217 C7orf65Q6ZTY9 151 aa7.55□□□□□ -1.2
COL16A1-206ENST00000461217 C20orf197Q8N268 126 aa7.55□□□□□ -1.2
COL16A1-206ENST00000461217 IGKV2D-30A0A075B6S6 120 aa7.54□□□□□ -1.2
COL16A1-206ENST00000461217 HRES1P13985 223 aa7.53□□□□□ -1.2
COL16A1-206ENST00000461217 SPINK7P58062 85 aa7.51□□□□□ -1.21
COL16A1-206ENST00000461217 MPLKIPQ8TAP9 179 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms