RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 J3KT08 172 aa8.62□□□□□ -1.03
SDF4-204ENST00000459994 Q6ZVQ6 151 aa8.61□□□□□ -1.03
SDF4-204ENST00000459994 UBL5Q9BZL1 73 aa8.61□□□□□ -1.03
SDF4-204ENST00000459994 IGKV4-1P06312 121 aa8.6□□□□□ -1.03
SDF4-204ENST00000459994 DEFB116Q30KQ4 102 aa8.58□□□□□ -1.04
SDF4-204ENST00000459994 SIGMAR1Q99720 223 aa8.57□□□□□ -1.04
SDF4-204ENST00000459994 BPY2O14599 106 aa8.54□□□□□ -1.04
SDF4-204ENST00000459994 K7ERU9 68 aa8.53□□□□□ -1.04
SDF4-204ENST00000459994 A8MWP4 228 aa8.52□□□□□ -1.05
SDF4-204ENST00000459994 XP32Q5T750 250 aa8.52□□□□□ -1.05
SDF4-204ENST00000459994 KRTAP9-2Q9BYQ4 174 aa8.52□□□□□ -1.05
SDF4-204ENST00000459994 NDUFB1O75438 58 aa8.51□□□□□ -1.05
SDF4-204ENST00000459994 DSCR10P59022 87 aa8.51□□□□□ -1.05
SDF4-204ENST00000459994 A0A1B0GVX0 72 aa8.5□□□□□ -1.05
SDF4-204ENST00000459994 IGKV3D-7A0A0C4DH55 119 aa8.49□□□□□ -1.05
SDF4-204ENST00000459994 CXCL6P80162 114 aa8.48□□□□□ -1.05
SDF4-204ENST00000459994 LINC00643Q86TS7 51 aa8.47□□□□□ -1.05
SDF4-204ENST00000459994 PRR15Q8IV56 129 aa8.47□□□□□ -1.05
SDF4-204ENST00000459994 IGHV6-1A0A0B4J1U7 121 aa8.46□□□□□ -1.06
SDF4-204ENST00000459994 C8orf87E5RJ46 101 aa8.46□□□□□ -1.06
SDF4-204ENST00000459994 SEC61BP60468 96 aaKnown RBP8.46□□□□□ -1.06
SDF4-204ENST00000459994 ATP5EP2Q5VTU8 51 aa8.46□□□□□ -1.06
SDF4-204ENST00000459994 C9orf92A6NGG3 77 aa8.45□□□□□ -1.06
SDF4-204ENST00000459994 LINC00313P59037 77 aa8.45□□□□□ -1.06
SDF4-204ENST00000459994 K7EQZ3 153 aa8.44□□□□□ -1.06
SDF4-204ENST00000459994 NOTCH2NLQ7Z3S9 236 aa8.42□□□□□ -1.06
SDF4-204ENST00000459994 C8orf17Q9NRJ1 99 aa8.41□□□□□ -1.06
SDF4-204ENST00000459994 Q8N9L7 120 aa8.4□□□□□ -1.06
SDF4-204ENST00000459994 KRTAP16-1A8MUX0 517 aa8.38□□□□□ -1.07
SDF4-204ENST00000459994 KRTAP19-2Q3LHN2 52 aa8.38□□□□□ -1.07
SDF4-204ENST00000459994 LCE2CQ5TA81 110 aa8.38□□□□□ -1.07
SDF4-204ENST00000459994 MMP24-AS1A0A0U1RRL7 71 aa8.37□□□□□ -1.07
SDF4-204ENST00000459994 PCOTHQ58A44 107 aa8.37□□□□□ -1.07
SDF4-204ENST00000459994 C20orf166-AS1Q96NR2 134 aa8.34□□□□□ -1.07
SDF4-204ENST00000459994 hDV103S1A0JD37 113 aa8.33□□□□□ -1.08
SDF4-204ENST00000459994 A8MUU9 505 aa8.33□□□□□ -1.08
SDF4-204ENST00000459994 Q75L30 129 aa8.33□□□□□ -1.08
SDF4-204ENST00000459994 TMEM254Q8TBM7 123 aa8.33□□□□□ -1.08
SDF4-204ENST00000459994 HCG22E2RYF7 251 aa8.31□□□□□ -1.08
SDF4-204ENST00000459994 RPL37P61927 97 aaKnown RBP8.31□□□□□ -1.08
SDF4-204ENST00000459994 HIST1H4AP62805 103 aaKnown RBP8.3□□□□□ -1.08
SDF4-204ENST00000459994 CASC2Q6XLA1 102 aa8.3□□□□□ -1.08
SDF4-204ENST00000459994 Q8N9P0 234 aaPredicted RBP8.3□□□□□ -1.08
SDF4-204ENST00000459994 MRPL34Q9BQ48 92 aaKnown RBP8.3□□□□□ -1.08
SDF4-204ENST00000459994 WFDC13Q8IUB5 93 aa8.29□□□□□ -1.08
SDF4-204ENST00000459994 IMUPQ9GZP8 106 aa8.27□□□□□ -1.09
SDF4-204ENST00000459994 MT-ATP8P03928 68 aa8.26□□□□□ -1.09
SDF4-204ENST00000459994 MT1HP80294 61 aa8.25□□□□□ -1.09
SDF4-204ENST00000459994 KRTAP9-6A0A140TA67 174 aa8.24□□□□□ -1.09
SDF4-204ENST00000459994 A0A087WVE0 104 aa8.23□□□□□ -1.09
SDF4-204ENST00000459994 ATP11AUNQ6ZP68 121 aa8.22□□□□□ -1.09
SDF4-204ENST00000459994 NDUFS5O43920 106 aa8.18□□□□□ -1.1
SDF4-204ENST00000459994 LCE2DQ5TA82 110 aaPredicted RBP8.18□□□□□ -1.1
SDF4-204ENST00000459994 ZCCHC13Q8WW36 166 aaKnown RBP8.17□□□□□ -1.1
SDF4-204ENST00000459994 FLGP20930 4061 aaPredicted RBP8.16□□□□□ -1.1
SDF4-204ENST00000459994 TP53AIP1Q9HCN2 124 aa8.15□□□□□ -1.1
SDF4-204ENST00000459994 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
SDF4-204ENST00000459994 KRTAP10-6P60371 365 aaPredicted RBP8.09□□□□□ -1.11
SDF4-204ENST00000459994 Q5W150 140 aa8.09□□□□□ -1.11
SDF4-204ENST00000459994 FAM236AA0A1B0GUQ0 79 aa8.06□□□□□ -1.12
SDF4-204ENST00000459994 FAM236BA0A1B0GV22 79 aa8.06□□□□□ -1.12
SDF4-204ENST00000459994 UQCRQO14949 82 aa8.06□□□□□ -1.12
SDF4-204ENST00000459994 SCGB1A1P11684 91 aa8.06□□□□□ -1.12
SDF4-204ENST00000459994 OCR1Q9BZK8 76 aa8.05□□□□□ -1.12
SDF4-204ENST00000459994 COX6B2Q6YFQ2 88 aa8.03□□□□□ -1.12
SDF4-204ENST00000459994 CRCT1Q9UGL9 99 aa8.01□□□□□ -1.13
SDF4-204ENST00000459994 TRAV22A0A0B4J277 110 aa8□□□□□ -1.13
SDF4-204ENST00000459994 M0R2T5 61 aa8□□□□□ -1.13
SDF4-204ENST00000459994 SMIM20Q8N5G0 67 aa8□□□□□ -1.13
SDF4-204ENST00000459994 FSIP2Q5CZC0 6907 aa8□□□□□ -1.13
SDF4-204ENST00000459994 SPINK7P58062 85 aa7.99□□□□□ -1.13
SDF4-204ENST00000459994 ATOX1O00244 68 aa7.98□□□□□ -1.13
SDF4-204ENST00000459994 TRAV7A0A075B6U4 112 aa7.96□□□□□ -1.14
SDF4-204ENST00000459994 C5orf47Q569G3 176 aa7.96□□□□□ -1.14
SDF4-204ENST00000459994 H0Y9P7 68 aa7.95□□□□□ -1.14
SDF4-204ENST00000459994 IGKV2-30P06310 120 aa7.95□□□□□ -1.14
SDF4-204ENST00000459994 C7orf65Q6ZTY9 151 aa7.95□□□□□ -1.14
SDF4-204ENST00000459994 IGKV2D-30A0A075B6S6 120 aa7.94□□□□□ -1.14
SDF4-204ENST00000459994 LOC101927531A0A1B0GV80 90 aa7.92□□□□□ -1.14
SDF4-204ENST00000459994 MP68P56378 58 aa7.92□□□□□ -1.14
SDF4-204ENST00000459994 HRES1P13985 223 aa7.91□□□□□ -1.14
SDF4-204ENST00000459994 H3BPC8 53 aa7.9□□□□□ -1.14
SDF4-204ENST00000459994 SERP2Q8N6R1 65 aa7.88□□□□□ -1.15
SDF4-204ENST00000459994 MPLKIPQ8TAP9 179 aa7.88□□□□□ -1.15
SDF4-204ENST00000459994 CYP4F30PQ9H0H9 118 aa7.88□□□□□ -1.15
SDF4-204ENST00000459994 C1orf64Q8NEQ6 169 aa7.87□□□□□ -1.15
SDF4-204ENST00000459994 LINC00208Q96KT6 92 aa7.87□□□□□ -1.15
SDF4-204ENST00000459994 RBM12B-AS1Q9P1G2 102 aa7.83□□□□□ -1.16
SDF4-204ENST00000459994 KRTAP9-8Q9BYQ0 159 aa7.81□□□□□ -1.16
SDF4-204ENST00000459994 COX7CP15954 63 aa7.77□□□□□ -1.17
SDF4-204ENST00000459994 ANAPC13Q9BS18 74 aa7.76□□□□□ -1.17
SDF4-204ENST00000459994 C4orf26Q17RF5 130 aa7.75□□□□□ -1.17
SDF4-204ENST00000459994 FAM236DA0A1B0GTK5 79 aa7.74□□□□□ -1.17
SDF4-204ENST00000459994 FAM236CP0DP71 79 aa7.74□□□□□ -1.17
SDF4-204ENST00000459994 KLKP1Q107X0 134 aa7.74□□□□□ -1.17
SDF4-204ENST00000459994 C20orf197Q8N268 126 aa7.74□□□□□ -1.17
SDF4-204ENST00000459994 SNURFQ9Y675 71 aa7.7□□□□□ -1.18
SDF4-204ENST00000459994 MT2AP02795 61 aa7.68□□□□□ -1.18
SDF4-204ENST00000459994 KRTAP3-1Q9BYR8 98 aa7.67□□□□□ -1.18
SDF4-204ENST00000459994 H1FX-AS1Q4G0G2 97 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms