RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 XP32Q5T750 250 aa5.94□□□□□ -1.46
UBR4-208ENST00000459947 C4orf26Q17RF5 130 aa5.91□□□□□ -1.46
UBR4-208ENST00000459947 OBSCN-AS1Q96MR7 158 aa5.89□□□□□ -1.47
UBR4-208ENST00000459947 UQCRQO14949 82 aa5.89□□□□□ -1.47
UBR4-208ENST00000459947 TMEM258P61165 79 aa5.89□□□□□ -1.47
UBR4-208ENST00000459947 Q6ZQT0 140 aa5.88□□□□□ -1.47
UBR4-208ENST00000459947 HIST1H4AP62805 103 aaKnown RBP5.86□□□□□ -1.47
UBR4-208ENST00000459947 C8orf87E5RJ46 101 aa5.86□□□□□ -1.47
UBR4-208ENST00000459947 C9orf92A6NGG3 77 aa5.85□□□□□ -1.47
UBR4-208ENST00000459947 IGKV4-1P06312 121 aa5.85□□□□□ -1.47
UBR4-208ENST00000459947 PMAIP1Q13794 54 aa5.85□□□□□ -1.47
UBR4-208ENST00000459947 RPL37P61927 97 aaKnown RBP5.84□□□□□ -1.47
UBR4-208ENST00000459947 Q96NJ1 140 aa5.84□□□□□ -1.47
UBR4-208ENST00000459947 NDUFB1O75438 58 aa5.84□□□□□ -1.47
UBR4-208ENST00000459947 LINC00472Q9H8W2 130 aa5.84□□□□□ -1.47
UBR4-208ENST00000459947 C14orf132Q9NPU4 83 aa5.84□□□□□ -1.48
UBR4-208ENST00000459947 FAM240AA0A1B0GVK7 77 aa5.83□□□□□ -1.48
UBR4-208ENST00000459947 ATOX1O00244 68 aa5.83□□□□□ -1.48
UBR4-208ENST00000459947 Q75L30 129 aa5.83□□□□□ -1.48
UBR4-208ENST00000459947 MPLKIPQ8TAP9 179 aa5.83□□□□□ -1.48
UBR4-208ENST00000459947 LINC00313P59037 77 aa5.8□□□□□ -1.48
UBR4-208ENST00000459947 NREPQ16612 68 aa5.8□□□□□ -1.48
UBR4-208ENST00000459947 SPTSSBQ8NFR3 76 aa5.79□□□□□ -1.48
UBR4-208ENST00000459947 A0A1B0GVX0 72 aa5.79□□□□□ -1.48
UBR4-208ENST00000459947 ATP11AUNQ6ZP68 121 aa5.79□□□□□ -1.48
UBR4-208ENST00000459947 C20orf166-AS1Q96NR2 134 aa5.78□□□□□ -1.48
UBR4-208ENST00000459947 MUC17Q685J3 4493 aa5.78□□□□□ -1.48
UBR4-208ENST00000459947 H3BS24 57 aa5.77□□□□□ -1.49
UBR4-208ENST00000459947 PRO0461Q9UI25 63 aa5.77□□□□□ -1.49
UBR4-208ENST00000459947 A8MUU9 505 aa5.76□□□□□ -1.49
UBR4-208ENST00000459947 A8MWP4 228 aa5.76□□□□□ -1.49
UBR4-208ENST00000459947 PCOTHQ58A44 107 aa5.76□□□□□ -1.49
UBR4-208ENST00000459947 COX7CP15954 63 aa5.75□□□□□ -1.49
UBR4-208ENST00000459947 SMCPP49901 116 aaPredicted RBP5.75□□□□□ -1.49
UBR4-208ENST00000459947 IGHV6-1A0A0B4J1U7 121 aa5.74□□□□□ -1.49
UBR4-208ENST00000459947 DSCR10P59022 87 aa5.74□□□□□ -1.49
UBR4-208ENST00000459947 SMIM26A0A096LP01 95 aa5.74□□□□□ -1.49
UBR4-208ENST00000459947 LRP2P98164 4655 aa5.74□□□□□ -1.49
UBR4-208ENST00000459947 RPS28P62857 69 aaKnown RBP5.74□□□□□ -1.49
UBR4-208ENST00000459947 C20orf197Q8N268 126 aa5.74□□□□□ -1.49
UBR4-208ENST00000459947 UBL5Q9BZL1 73 aa5.73□□□□□ -1.49
UBR4-208ENST00000459947 BPY2O14599 106 aa5.72□□□□□ -1.49
UBR4-208ENST00000459947 IGKV3D-7A0A0C4DH55 119 aa5.71□□□□□ -1.5
UBR4-208ENST00000459947 DEFB116Q30KQ4 102 aa5.71□□□□□ -1.5
UBR4-208ENST00000459947 PRR15Q8IV56 129 aa5.7□□□□□ -1.5
UBR4-208ENST00000459947 C8orf17Q9NRJ1 99 aa5.7□□□□□ -1.5
UBR4-208ENST00000459947 KRTAP16-1A8MUX0 517 aa5.69□□□□□ -1.5
UBR4-208ENST00000459947 ACYP1P07311 99 aa5.69□□□□□ -1.5
UBR4-208ENST00000459947 Q6ZVQ6 151 aa5.69□□□□□ -1.5
UBR4-208ENST00000459947 LINC00643Q86TS7 51 aa5.69□□□□□ -1.5
UBR4-208ENST00000459947 TMEM254Q8TBM7 123 aa5.68□□□□□ -1.5
UBR4-208ENST00000459947 LPAP08519 4548 aa5.68□□□□□ -1.5
UBR4-208ENST00000459947 SERP2Q8N6R1 65 aa5.67□□□□□ -1.5
UBR4-208ENST00000459947 SERP1Q9Y6X1 66 aa5.67□□□□□ -1.5
UBR4-208ENST00000459947 IMUPQ9GZP8 106 aa5.65□□□□□ -1.51
UBR4-208ENST00000459947 Q8N9P0 234 aaPredicted RBP5.64□□□□□ -1.51
UBR4-208ENST00000459947 UBR4Q5T4S7 5183 aa5.63□□□□□ -1.51
UBR4-208ENST00000459947 MRPL34Q9BQ48 92 aaKnown RBP5.63□□□□□ -1.51
UBR4-208ENST00000459947 RNF213Q63HN8 5207 aa5.62□□□□□ -1.51
UBR4-208ENST00000459947 ZCCHC13Q8WW36 166 aaKnown RBP5.62□□□□□ -1.51
UBR4-208ENST00000459947 CXCL6P80162 114 aa5.62□□□□□ -1.51
UBR4-208ENST00000459947 KRTAP4-1Q9BYQ7 146 aa5.62□□□□□ -1.51
UBR4-208ENST00000459947 LINC00846Q9NV44 126 aa5.62□□□□□ -1.51
UBR4-208ENST00000459947 MMP24-AS1A0A0U1RRL7 71 aa5.62□□□□□ -1.51
UBR4-208ENST00000459947 hDV103S1A0JD37 113 aa5.62□□□□□ -1.51
UBR4-208ENST00000459947 ATP5EP2Q5VTU8 51 aa5.62□□□□□ -1.51
UBR4-208ENST00000459947 NOTCH2NLQ7Z3S9 236 aa5.61□□□□□ -1.51
UBR4-208ENST00000459947 K7EQZ3 153 aa5.6□□□□□ -1.51
UBR4-208ENST00000459947 COX6B2Q6YFQ2 88 aa5.59□□□□□ -1.51
UBR4-208ENST00000459947 CASC2Q6XLA1 102 aa5.58□□□□□ -1.52
UBR4-208ENST00000459947 SNURFQ9Y675 71 aa5.58□□□□□ -1.52
UBR4-208ENST00000459947 RBM12B-AS1Q9P1G2 102 aa5.56□□□□□ -1.52
UBR4-208ENST00000459947 HCG22E2RYF7 251 aa5.56□□□□□ -1.52
UBR4-208ENST00000459947 NDUFS5O43920 106 aa5.55□□□□□ -1.52
UBR4-208ENST00000459947 WFDC13Q8IUB5 93 aa5.55□□□□□ -1.52
UBR4-208ENST00000459947 PSPHP1O15172 72 aa5.54□□□□□ -1.52
UBR4-208ENST00000459947 LCE2AQ5TA79 106 aaPredicted RBP5.53□□□□□ -1.52
UBR4-208ENST00000459947 CHKB-CPT1BH3BT56 60 aa5.53□□□□□ -1.52
UBR4-208ENST00000459947 TP53AIP1Q9HCN2 124 aa5.53□□□□□ -1.52
UBR4-208ENST00000459947 A0A087WVE0 104 aa5.52□□□□□ -1.53
UBR4-208ENST00000459947 ATP5EP56381 51 aaPredicted RBP5.52□□□□□ -1.53
UBR4-208ENST00000459947 A6NED7 52 aa5.51□□□□□ -1.53
UBR4-208ENST00000459947 SPINK7P58062 85 aa5.49□□□□□ -1.53
UBR4-208ENST00000459947 Q8N9L7 120 aa5.49□□□□□ -1.53
UBR4-208ENST00000459947 KRTAP19-2Q3LHN2 52 aa5.49□□□□□ -1.53
UBR4-208ENST00000459947 NDUFC1O43677 76 aa5.48□□□□□ -1.53
UBR4-208ENST00000459947 HRES1P13985 223 aa5.48□□□□□ -1.53
UBR4-208ENST00000459947 LCE2CQ5TA81 110 aa5.48□□□□□ -1.53
UBR4-208ENST00000459947 C7orf65Q6ZTY9 151 aa5.48□□□□□ -1.53
UBR4-208ENST00000459947 KTN1-AS1Q86SY8 53 aa5.45□□□□□ -1.54
UBR4-208ENST00000459947 MT1HP80294 61 aa5.44□□□□□ -1.54
UBR4-208ENST00000459947 M0R2T5 61 aa5.43□□□□□ -1.54
UBR4-208ENST00000459947 MP68P56378 58 aa5.42□□□□□ -1.54
UBR4-208ENST00000459947 TRAV7A0A075B6U4 112 aa5.41□□□□□ -1.54
UBR4-208ENST00000459947 Q5W150 140 aa5.4□□□□□ -1.55
UBR4-208ENST00000459947 IGKV2D-30A0A075B6S6 120 aa5.4□□□□□ -1.55
UBR4-208ENST00000459947 IGKV2-30P06310 120 aa5.4□□□□□ -1.55
UBR4-208ENST00000459947 LCA10Q71F78 164 aa5.38□□□□□ -1.55
UBR4-208ENST00000459947 PRR15LQ9BU68 103 aa5.38□□□□□ -1.55
UBR4-208ENST00000459947 FAT4Q6V0I7 4981 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms