RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 TMEM136Q6ZRR5 245 aa1.13□□□□□ -2.23
NEDD1-204ENST00000457368 MACF1Q9UPN3 7388 aaKnown RBP1.13□□□□□ -2.23
NEDD1-204ENST00000457368 I3L3M4 83 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 NPYP01303 97 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 MGPP08493 103 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 SMIM13P0DJ93 91 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 COX8AP10176 69 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 POLR2KP53803 58 aaKnown RBP1.12□□□□□ -2.23
NEDD1-204ENST00000457368 PCOTHQ58A44 107 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 UNQ6190/PRO20217Q6UXQ8 127 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 ADM2Q7Z4H4 148 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 ANAPC11Q9NYG5 84 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 A0A0B4J2C4 111 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 CTXND1A0A1B0GTU2 59 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 SDHAF1A6NFY7 115 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 MIR7-3HGQ8N6C7 128 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 PRO0461Q9UI25 63 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 SERP1Q9Y6X1 66 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 KRTAP9-6A8MVA2 160 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 SNCGO76070 127 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 LYZL1Q6UWQ5 148 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 C5orf38Q86SI9 138 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 CHCHD1Q96BP2 118 aaKnown RBP1.12□□□□□ -2.23
NEDD1-204ENST00000457368 UBE2D4Q9Y2X8 147 aa1.12□□□□□ -2.23
NEDD1-204ENST00000457368 SYNE2Q8WXH0 6885 aaKnown RBP1.11□□□□□ -2.23
NEDD1-204ENST00000457368 TIMM17BO60830 172 aa1.11□□□□□ -2.23
NEDD1-204ENST00000457368 MT2AP02795 61 aa1.11□□□□□ -2.23
NEDD1-204ENST00000457368 CKS2P33552 79 aa1.11□□□□□ -2.23
NEDD1-204ENST00000457368 SSBP3-AS1Q7Z2R9 100 aa1.11□□□□□ -2.23
NEDD1-204ENST00000457368 SMCR5Q8TEV8 140 aa1.11□□□□□ -2.23
NEDD1-204ENST00000457368 PPDPFLQ8WWR9 84 aa1.11□□□□□ -2.23
NEDD1-204ENST00000457368 SPRR4Q96PI1 79 aa1.11□□□□□ -2.23
NEDD1-204ENST00000457368 LEPROTL1O95214 131 aa1.11□□□□□ -2.23
NEDD1-204ENST00000457368 LINC00483Q53H64 154 aa1.11□□□□□ -2.23
NEDD1-204ENST00000457368 COX6B2Q6YFQ2 88 aa1.11□□□□□ -2.23
NEDD1-204ENST00000457368 RPL39LQ96EH5 51 aaKnown RBP1.11□□□□□ -2.23
NEDD1-204ENST00000457368 LINC00167Q96N53 147 aa1.11□□□□□ -2.23
NEDD1-204ENST00000457368 FXYD2P54710 66 aa1.1□□□□□ -2.23
NEDD1-204ENST00000457368 NPC2P61916 151 aa1.1□□□□□ -2.23
NEDD1-204ENST00000457368 CLEC2BQ92478 149 aa1.1□□□□□ -2.23
NEDD1-204ENST00000457368 NHP2Q9NX24 153 aaKnown RBP1.1□□□□□ -2.23
NEDD1-204ENST00000457368 V9GYV3 84 aa1.1□□□□□ -2.23
NEDD1-204ENST00000457368 PPP1R17O96001 155 aa1.1□□□□□ -2.23
NEDD1-204ENST00000457368 MT1FP04733 61 aa1.1□□□□□ -2.23
NEDD1-204ENST00000457368 RPL37P61927 97 aaKnown RBP1.1□□□□□ -2.23
NEDD1-204ENST00000457368 ZC2HC1BQ5TFG8 222 aa1.1□□□□□ -2.23
NEDD1-204ENST00000457368 Q8IZM0 81 aa1.1□□□□□ -2.23
NEDD1-204ENST00000457368 HIGD1BQ9P298 99 aa1.1□□□□□ -2.23
NEDD1-204ENST00000457368 LOC107984156A0A0G2JMH3 177 aa1.09□□□□□ -2.23
NEDD1-204ENST00000457368 ARL17AQ8IVW1 177 aa1.09□□□□□ -2.23
NEDD1-204ENST00000457368 SMIM27A0A1W2PRY6 76 aa1.09□□□□□ -2.24
NEDD1-204ENST00000457368 H3BPC8 53 aa1.09□□□□□ -2.24
NEDD1-204ENST00000457368 DEFB116Q30KQ4 102 aa1.09□□□□□ -2.24
NEDD1-204ENST00000457368 ATP11AUNQ6ZP68 121 aa1.09□□□□□ -2.24
NEDD1-204ENST00000457368 C1orf64Q8NEQ6 169 aa1.09□□□□□ -2.24
NEDD1-204ENST00000457368 TRAV7A0A075B6U4 112 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 TRBV7-7A0A0K0K1E9 115 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 A8MUU9 505 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 H3BQ85 93 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 H7C2G1 150 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 COX7CP15954 63 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 C2orf82Q6UX34 121 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 DSCR8Q96T75 97 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 TRBV10-2A0A0K0K1G8 114 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 hDV103S1A0JD37 113 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 F8VRH5 84 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 PRLHP81277 87 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 LCE3EQ5T5B0 92 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 SPANXA2-OT1Q8N9U9 137 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 A0A096LNJ9 63 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 K7EMI3 77 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 SPRR1AP35321 89 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 DSCR10P59022 87 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 Q8NDZ9 215 aa1.08□□□□□ -2.24
NEDD1-204ENST00000457368 hADV29S1A0JD25 119 aa1.07□□□□□ -2.24
NEDD1-204ENST00000457368 C11orf86A6NJI1 115 aa1.07□□□□□ -2.24
NEDD1-204ENST00000457368 IGKCP01834 107 aa1.07□□□□□ -2.24
NEDD1-204ENST00000457368 FCER1GP30273 86 aa1.07□□□□□ -2.24
NEDD1-204ENST00000457368 ATP5EP56381 51 aaPredicted RBP1.07□□□□□ -2.24
NEDD1-204ENST00000457368 LCE3AQ5TA76 89 aa1.07□□□□□ -2.24
NEDD1-204ENST00000457368 MYMXA0A1B0GTQ4 84 aa1.07□□□□□ -2.24
NEDD1-204ENST00000457368 LINC01549A6NIU2 74 aa1.07□□□□□ -2.24
NEDD1-204ENST00000457368 A6NN06 94 aa1.07□□□□□ -2.24
NEDD1-204ENST00000457368 ZNF22P17026 224 aaPredicted RBP1.07□□□□□ -2.24
NEDD1-204ENST00000457368 S100A7L2Q5SY68 101 aa1.07□□□□□ -2.24
NEDD1-204ENST00000457368 Q6ZQT0 140 aa1.07□□□□□ -2.24
NEDD1-204ENST00000457368 LIMD2Q9BT23 127 aa1.07□□□□□ -2.24
NEDD1-204ENST00000457368 NXT2Q9NPJ8 142 aaKnown RBP1.07□□□□□ -2.24
NEDD1-204ENST00000457368 HIGD1CA8MV81 97 aa1.06□□□□□ -2.24
NEDD1-204ENST00000457368 ATOX1O00244 68 aa1.06□□□□□ -2.24
NEDD1-204ENST00000457368 RBM3P98179 157 aaKnown RBP1.06□□□□□ -2.24
NEDD1-204ENST00000457368 TMEM170BQ5T4T1 132 aa1.06□□□□□ -2.24
NEDD1-204ENST00000457368 AMELXQ99217 191 aa1.06□□□□□ -2.24
NEDD1-204ENST00000457368 C14orf132Q9NPU4 83 aa1.06□□□□□ -2.24
NEDD1-204ENST00000457368 IGLV6-57P01721 117 aa1.06□□□□□ -2.24
NEDD1-204ENST00000457368 KRTAP10-10P60014 251 aa1.06□□□□□ -2.24
NEDD1-204ENST00000457368 Q8N8P6 123 aa1.06□□□□□ -2.24
NEDD1-204ENST00000457368 IFI27L1Q96BM0 104 aa1.06□□□□□ -2.24
NEDD1-204ENST00000457368 HIGD2AQ9BW72 106 aa1.06□□□□□ -2.24
NEDD1-204ENST00000457368 CYSTM1Q9H1C7 97 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms