RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 C10orf95Q9H7T3 257 aa2.68□□□□□ -1.98
PCDH9-203ENST00000456367 TNP1P09430 55 aa2.67□□□□□ -1.98
PCDH9-203ENST00000456367 HECTD1Q9ULT8 2610 aa2.67□□□□□ -1.98
PCDH9-203ENST00000456367 NOTCH1P46531 2555 aa2.66□□□□□ -1.98
PCDH9-203ENST00000456367 ZNF292O60281 2723 aa2.65□□□□□ -1.98
PCDH9-203ENST00000456367 AKAP9Q99996 3911 aa2.65□□□□□ -1.98
PCDH9-203ENST00000456367 TRIOO75962 3097 aa2.65□□□□□ -1.99
PCDH9-203ENST00000456367 MAP1AP78559 2803 aaPredicted RBP2.65□□□□□ -1.99
PCDH9-203ENST00000456367 FRYQ5TBA9 3013 aa2.65□□□□□ -1.99
PCDH9-203ENST00000456367 MGAQ8IWI9 3026 aa2.63□□□□□ -1.99
PCDH9-203ENST00000456367 NBEAQ8NFP9 2946 aa2.63□□□□□ -1.99
PCDH9-203ENST00000456367 KMT2BQ9UMN6 2715 aaPredicted RBP2.62□□□□□ -1.99
PCDH9-203ENST00000456367 STAB1Q9NY15 2570 aa2.62□□□□□ -1.99
PCDH9-203ENST00000456367 DSPP15924 2871 aaKnown RBP2.62□□□□□ -1.99
PCDH9-203ENST00000456367 STAB2Q8WWQ8 2551 aa2.62□□□□□ -1.99
PCDH9-203ENST00000456367 KRTAP1-4P0C5Y4 121 aa2.62□□□□□ -1.99
PCDH9-203ENST00000456367 TEX15Q9BXT5 2789 aa2.62□□□□□ -1.99
PCDH9-203ENST00000456367 WDFY4Q6ZS81 3184 aa2.62□□□□□ -1.99
PCDH9-203ENST00000456367 BAHCC1Q9P281 2608 aa2.62□□□□□ -1.99
PCDH9-203ENST00000456367 TEP1Q99973 2627 aaKnown RBP2.61□□□□□ -1.99
PCDH9-203ENST00000456367 CFAP46Q8IYW2 2715 aa2.61□□□□□ -1.99
PCDH9-203ENST00000456367 KALRNO60229 2985 aa2.61□□□□□ -1.99
PCDH9-203ENST00000456367 CSMD3Q7Z407 3707 aa2.6□□□□□ -1.99
PCDH9-203ENST00000456367 COL6A5A8TX70 2615 aa2.6□□□□□ -1.99
PCDH9-203ENST00000456367 LOC400499M0QZD8 3231 aa2.6□□□□□ -1.99
PCDH9-203ENST00000456367 KRTAP17-1Q9BYP8 105 aa2.6□□□□□ -1.99
PCDH9-203ENST00000456367 Q5VSD8 79 aa2.6□□□□□ -1.99
PCDH9-203ENST00000456367 VPS13AQ96RL7 3174 aa2.59□□□□□ -1.99
PCDH9-203ENST00000456367 APCP25054 2843 aa2.59□□□□□ -1.99
PCDH9-203ENST00000456367 TPRXLQ17RH7 258 aa2.59□□□□□ -1.99
PCDH9-203ENST00000456367 NSD1Q96L73 2696 aaPredicted RBP2.59□□□□□ -1.99
PCDH9-203ENST00000456367 FRYLO94915 3013 aa2.58□□□□□ -2
PCDH9-203ENST00000456367 ZZEF1O43149 2961 aa2.57□□□□□ -2
PCDH9-203ENST00000456367 M0R2T5 61 aa2.57□□□□□ -2
PCDH9-203ENST00000456367 KRTAP10-8P60410 259 aa2.56□□□□□ -2
PCDH9-203ENST00000456367 KRTAP15-1Q3LI76 137 aa2.56□□□□□ -2
PCDH9-203ENST00000456367 UTP20O75691 2785 aaKnown RBP2.56□□□□□ -2
PCDH9-203ENST00000456367 ZNF469Q96JG9 3925 aaPredicted RBP2.55□□□□□ -2
PCDH9-203ENST00000456367 UBR5O95071 2799 aaPredicted RBP2.55□□□□□ -2
PCDH9-203ENST00000456367 XP32Q5T750 250 aa2.53□□□□□ -2
PCDH9-203ENST00000456367 LAMA1P25391 3075 aa2.53□□□□□ -2
PCDH9-203ENST00000456367 KRTAP12-1P59990 96 aa2.53□□□□□ -2
PCDH9-203ENST00000456367 NIPBLQ6KC79 2804 aaeCLIP2.53□□□□□ -2.01
PCDH9-203ENST00000456367 KRTAP12-2P59991 146 aa2.52□□□□□ -2.01
PCDH9-203ENST00000456367 KRTAP13-4Q3LI77 160 aa2.52□□□□□ -2.01
PCDH9-203ENST00000456367 LRBAP50851 2863 aa2.51□□□□□ -2.01
PCDH9-203ENST00000456367 IGSF10Q6WRI0 2623 aa2.51□□□□□ -2.01
PCDH9-203ENST00000456367 ITPR2Q14571 2701 aa2.5□□□□□ -2.01
PCDH9-203ENST00000456367 INE1O15225 51 aa2.5□□□□□ -2.01
PCDH9-203ENST00000456367 PRO2289Q9P1D8 64 aa2.5□□□□□ -2.01
PCDH9-203ENST00000456367 KRTAP3-1Q9BYR8 98 aa2.5□□□□□ -2.01
PCDH9-203ENST00000456367 DCHS1Q96JQ0 3298 aa2.5□□□□□ -2.01
PCDH9-203ENST00000456367 ADGRG4Q8IZF6 3080 aa2.5□□□□□ -2.01
PCDH9-203ENST00000456367 TACC2O95359 2948 aa2.49□□□□□ -2.01
PCDH9-203ENST00000456367 DMXL1Q9Y485 3027 aa2.49□□□□□ -2.01
PCDH9-203ENST00000456367 KRTAP10-6P60371 365 aaPredicted RBP2.48□□□□□ -2.01
PCDH9-203ENST00000456367 VPS13CQ709C8 3753 aa2.48□□□□□ -2.01
PCDH9-203ENST00000456367 ASH1LQ9NR48 2969 aaKnown RBP2.47□□□□□ -2.01
PCDH9-203ENST00000456367 HRNRQ86YZ3 2850 aaPredicted RBP2.47□□□□□ -2.01
PCDH9-203ENST00000456367 FREM2Q5SZK8 3169 aa2.46□□□□□ -2.01
PCDH9-203ENST00000456367 TGP01266 2768 aa2.46□□□□□ -2.02
PCDH9-203ENST00000456367 BOD1L1Q8NFC6 3051 aa2.45□□□□□ -2.02
PCDH9-203ENST00000456367 FLNCQ14315 2725 aa2.45□□□□□ -2.02
PCDH9-203ENST00000456367 ANK2Q01484 3957 aa2.45□□□□□ -2.02
PCDH9-203ENST00000456367 CFAP47Q6ZTR5 3102 aa2.43□□□□□ -2.02
PCDH9-203ENST00000456367 HIVEP1P15822 2718 aa2.43□□□□□ -2.02
PCDH9-203ENST00000456367 ATMQ13315 3056 aa2.43□□□□□ -2.02
PCDH9-203ENST00000456367 LCE2AQ5TA79 106 aaPredicted RBP2.42□□□□□ -2.02
PCDH9-203ENST00000456367 KRTAP21-3Q3LHN1 58 aa2.41□□□□□ -2.02
PCDH9-203ENST00000456367 CELSR2Q9HCU4 2923 aa2.4□□□□□ -2.02
PCDH9-203ENST00000456367 ZANQ9Y493 2812 aa2.4□□□□□ -2.03
PCDH9-203ENST00000456367 KRTAP3-2Q9BYR7 98 aa2.39□□□□□ -2.03
PCDH9-203ENST00000456367 DMXL2Q8TDJ6 3036 aa2.39□□□□□ -2.03
PCDH9-203ENST00000456367 DCHS2Q6V1P9 2916 aa2.37□□□□□ -2.03
PCDH9-203ENST00000456367 COL12A1Q99715 3063 aa2.37□□□□□ -2.03
PCDH9-203ENST00000456367 FBN2P35556 2912 aa2.36□□□□□ -2.03
PCDH9-203ENST00000456367 KRTAP3-3Q9BYR6 98 aa2.35□□□□□ -2.03
PCDH9-203ENST00000456367 MXRA5Q9NR99 2828 aa2.35□□□□□ -2.03
PCDH9-203ENST00000456367 NF1P21359 2839 aa2.34□□□□□ -2.03
PCDH9-203ENST00000456367 TENM3Q9P273 2699 aa2.33□□□□□ -2.04
PCDH9-203ENST00000456367 TENM2Q9NT68 2774 aa2.33□□□□□ -2.04
PCDH9-203ENST00000456367 A0A1B0GVY2 172 aa2.29□□□□□ -2.04
PCDH9-203ENST00000456367 CELSR1Q9NYQ6 3014 aa2.28□□□□□ -2.04
PCDH9-203ENST00000456367 KRTAP19-4Q3LI73 84 aa2.27□□□□□ -2.05
PCDH9-203ENST00000456367 LCE2BO14633 110 aa2.27□□□□□ -2.05
PCDH9-203ENST00000456367 PDZD2O15018 2839 aa2.27□□□□□ -2.05
PCDH9-203ENST00000456367 KRTAP10-10P60014 251 aa2.27□□□□□ -2.05
PCDH9-203ENST00000456367 LYSTQ99698 3801 aa2.24□□□□□ -2.05
PCDH9-203ENST00000456367 LCE2CQ5TA81 110 aa2.23□□□□□ -2.05
PCDH9-203ENST00000456367 TENM4Q6N022 2769 aa2.23□□□□□ -2.05
PCDH9-203ENST00000456367 TENM1Q9UKZ4 2725 aa2.23□□□□□ -2.05
PCDH9-203ENST00000456367 CRYBG3Q68DQ2 2970 aa2.22□□□□□ -2.05
PCDH9-203ENST00000456367 HECTD4Q9Y4D8 3996 aa2.21□□□□□ -2.06
PCDH9-203ENST00000456367 TRRAPQ9Y4A5 3859 aa2.2□□□□□ -2.06
PCDH9-203ENST00000456367 PKD1L1Q8TDX9 2849 aa2.2□□□□□ -2.06
PCDH9-203ENST00000456367 VWFP04275 2813 aa2.2□□□□□ -2.06
PCDH9-203ENST00000456367 SRRM2Q9UQ35 2752 aaKnown RBP2.17□□□□□ -2.06
PCDH9-203ENST00000456367 ALMS1Q8TCU4 4167 aa2.16□□□□□ -2.06
PCDH9-203ENST00000456367 MEGF8Q7Z7M0 2845 aa2.16□□□□□ -2.06
PCDH9-203ENST00000456367 LORP23490 312 aaPredicted RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms