RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 SSBP3-AS1Q7Z2R9 100 aa7.42□□□□□ -1.22
ECHDC1-209ENST00000454591 MPLKIPQ8TAP9 179 aa7.42□□□□□ -1.22
ECHDC1-209ENST00000454591 V9GYY9 64 aa7.42□□□□□ -1.22
ECHDC1-209ENST00000454591 DNAH6Q9C0G6 4158 aa7.41□□□□□ -1.22
ECHDC1-209ENST00000454591 MRPL34Q9BQ48 92 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-209ENST00000454591 CDK2AP2O75956 126 aa7.39□□□□□ -1.23
ECHDC1-209ENST00000454591 LCE3BQ5TA77 95 aa7.39□□□□□ -1.23
ECHDC1-209ENST00000454591 C1orf195Q5TG92 126 aa7.38□□□□□ -1.23
ECHDC1-209ENST00000454591 IGHV6-1A0A0B4J1U7 121 aa7.37□□□□□ -1.23
ECHDC1-209ENST00000454591 PRR4Q16378 134 aa7.37□□□□□ -1.23
ECHDC1-209ENST00000454591 Q6ZSA8 131 aa7.37□□□□□ -1.23
ECHDC1-209ENST00000454591 ANAPC11Q9NYG5 84 aa7.36□□□□□ -1.23
ECHDC1-209ENST00000454591 C8orf87E5RJ46 101 aa7.35□□□□□ -1.23
ECHDC1-209ENST00000454591 DNAH2Q9P225 4427 aa7.35□□□□□ -1.23
ECHDC1-209ENST00000454591 KRTAP13-3Q3SY46 172 aa7.33□□□□□ -1.24
ECHDC1-209ENST00000454591 CIRBP-AS1Q8TBR5 109 aa7.33□□□□□ -1.24
ECHDC1-209ENST00000454591 DNAH8Q96JB1 4490 aa7.32□□□□□ -1.24
ECHDC1-209ENST00000454591 LY6G6CO95867 125 aa7.32□□□□□ -1.24
ECHDC1-209ENST00000454591 A0A087X002 238 aa7.31□□□□□ -1.24
ECHDC1-209ENST00000454591 LOC101927531A0A1B0GV80 90 aa7.31□□□□□ -1.24
ECHDC1-209ENST00000454591 NOTCH2NLQ7Z3S9 236 aa7.31□□□□□ -1.24
ECHDC1-209ENST00000454591 LIMD2Q9BT23 127 aa7.31□□□□□ -1.24
ECHDC1-209ENST00000454591 MEGF8Q7Z7M0 2845 aa7.3□□□□□ -1.24
ECHDC1-209ENST00000454591 KRTAP10-2P60368 255 aa7.3□□□□□ -1.24
ECHDC1-209ENST00000454591 Q8N9P0 234 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-209ENST00000454591 COA5Q86WW8 74 aa7.29□□□□□ -1.24
ECHDC1-209ENST00000454591 BRK1Q8WUW1 75 aa7.29□□□□□ -1.24
ECHDC1-209ENST00000454591 KRTAP4-8A0A0G2JLE6 195 aa7.28□□□□□ -1.24
ECHDC1-209ENST00000454591 NDUFS5O43920 106 aa7.27□□□□□ -1.25
ECHDC1-209ENST00000454591 KRTAP9-9Q9BYP9 154 aa7.27□□□□□ -1.25
ECHDC1-209ENST00000454591 KRTAP9-4Q9BYQ2 154 aa7.27□□□□□ -1.25
ECHDC1-209ENST00000454591 KMT2AQ03164 3969 aa7.27□□□□□ -1.25
ECHDC1-209ENST00000454591 KRTAP13-2Q52LG2 175 aa7.26□□□□□ -1.25
ECHDC1-209ENST00000454591 PCOTHQ58A44 107 aa7.26□□□□□ -1.25
ECHDC1-209ENST00000454591 KRTAP4-12Q9BQ66 201 aa7.26□□□□□ -1.25
ECHDC1-209ENST00000454591 ALMS1Q8TCU4 4167 aa7.25□□□□□ -1.25
ECHDC1-209ENST00000454591 Q5VV11 94 aa7.24□□□□□ -1.25
ECHDC1-209ENST00000454591 A8MUN3 132 aa7.23□□□□□ -1.25
ECHDC1-209ENST00000454591 KRTAP10-1P60331 282 aa7.23□□□□□ -1.25
ECHDC1-209ENST00000454591 PSPHP1O15172 72 aa7.22□□□□□ -1.25
ECHDC1-209ENST00000454591 Q5W150 140 aa7.22□□□□□ -1.25
ECHDC1-209ENST00000454591 SPINK6Q6UWN8 80 aa7.22□□□□□ -1.25
ECHDC1-209ENST00000454591 KRTAP1-4P0C5Y4 121 aa7.22□□□□□ -1.25
ECHDC1-209ENST00000454591 LINC00313P59037 77 aa7.2□□□□□ -1.26
ECHDC1-209ENST00000454591 Q75L30 129 aa7.2□□□□□ -1.26
ECHDC1-209ENST00000454591 LINC01558Q9Y6Z2 57 aa7.2□□□□□ -1.26
ECHDC1-209ENST00000454591 FRAS1Q86XX4 4008 aa7.19□□□□□ -1.26
ECHDC1-209ENST00000454591 FAM229AH3BQW9 127 aa7.19□□□□□ -1.26
ECHDC1-209ENST00000454591 HRES1P13985 223 aa7.19□□□□□ -1.26
ECHDC1-209ENST00000454591 TGP01266 2768 aa7.19□□□□□ -1.26
ECHDC1-209ENST00000454591 DNAH11Q96DT5 4516 aa7.18□□□□□ -1.26
ECHDC1-209ENST00000454591 KRTAP16-1A8MUX0 517 aa7.17□□□□□ -1.26
ECHDC1-209ENST00000454591 DNAH5Q8TE73 4624 aa7.15□□□□□ -1.26
ECHDC1-209ENST00000454591 PRR15LQ9BU68 103 aa7.14□□□□□ -1.27
ECHDC1-209ENST00000454591 RPS29P62273 56 aaKnown RBP7.13□□□□□ -1.27
ECHDC1-209ENST00000454591 DMAC1Q96GE9 116 aa7.13□□□□□ -1.27
ECHDC1-209ENST00000454591 IGKV2-30P06310 120 aa7.12□□□□□ -1.27
ECHDC1-209ENST00000454591 PKD1P98161 4303 aa7.12□□□□□ -1.27
ECHDC1-209ENST00000454591 ACYP2P14621 99 aa7.11□□□□□ -1.27
ECHDC1-209ENST00000454591 SPINK1P00995 79 aa7.11□□□□□ -1.27
ECHDC1-209ENST00000454591 CHKB-CPT1BH3BT56 60 aa7.1□□□□□ -1.27
ECHDC1-209ENST00000454591 PRR26Q8N8Z3 221 aa7.1□□□□□ -1.27
ECHDC1-209ENST00000454591 KRTAP4-7Q9BYR0 210 aa7.07□□□□□ -1.28
ECHDC1-209ENST00000454591 PLA2G1BP04054 148 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-209ENST00000454591 SPAG11AQ6PDA7 123 aa7.06□□□□□ -1.28
ECHDC1-209ENST00000454591 TYMSOSQ8TAI1 123 aa7.06□□□□□ -1.28
ECHDC1-209ENST00000454591 FAT2Q9NYQ8 4349 aa7.05□□□□□ -1.28
ECHDC1-209ENST00000454591 CDC42SE1Q9NRR8 79 aa7.04□□□□□ -1.28
ECHDC1-209ENST00000454591 ATP11AUNQ6ZP68 121 aa7.02□□□□□ -1.29
ECHDC1-209ENST00000454591 LCA10Q71F78 164 aa7.02□□□□□ -1.29
ECHDC1-209ENST00000454591 LRP1BQ9NZR2 4599 aa7.02□□□□□ -1.29
ECHDC1-209ENST00000454591 A6NED7 52 aa7.01□□□□□ -1.29
ECHDC1-209ENST00000454591 A8MU10 97 aa6.99□□□□□ -1.29
ECHDC1-209ENST00000454591 LINC00304Q8N9R0 145 aa6.99□□□□□ -1.29
ECHDC1-209ENST00000454591 SACSQ9NZJ4 4579 aa6.96□□□□□ -1.3
ECHDC1-209ENST00000454591 IGKV2D-30A0A075B6S6 120 aa6.96□□□□□ -1.3
ECHDC1-209ENST00000454591 PMAIP1Q13794 54 aa6.96□□□□□ -1.3
ECHDC1-209ENST00000454591 HYDINQ4G0P3 5121 aa6.95□□□□□ -1.3
ECHDC1-209ENST00000454591 A0A1B0GVY2 172 aa6.95□□□□□ -1.3
ECHDC1-209ENST00000454591 KRTAP19-1Q8IUB9 90 aa6.95□□□□□ -1.3
ECHDC1-209ENST00000454591 VPS13BQ7Z7G8 4022 aa6.94□□□□□ -1.3
ECHDC1-209ENST00000454591 SPINK7P58062 85 aa6.93□□□□□ -1.3
ECHDC1-209ENST00000454591 KRTAP10-4P60372 401 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-209ENST00000454591 RETNLBQ9BQ08 111 aa6.93□□□□□ -1.3
ECHDC1-209ENST00000454591 KMT2CQ8NEZ4 4911 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-209ENST00000454591 LCE1DQ5T752 114 aa6.92□□□□□ -1.3
ECHDC1-209ENST00000454591 C7orf65Q6ZTY9 151 aa6.91□□□□□ -1.3
ECHDC1-209ENST00000454591 A6NN06 94 aa6.9□□□□□ -1.31
ECHDC1-209ENST00000454591 A8MUU9 505 aa6.89□□□□□ -1.31
ECHDC1-209ENST00000454591 C20orf166-AS1Q96NR2 134 aa6.89□□□□□ -1.31
ECHDC1-209ENST00000454591 RYR3Q15413 4870 aa6.86□□□□□ -1.31
ECHDC1-209ENST00000454591 A0A1B0GU69 56 aa6.85□□□□□ -1.31
ECHDC1-209ENST00000454591 SPTSSBQ8NFR3 76 aa6.85□□□□□ -1.31
ECHDC1-209ENST00000454591 KTN1-AS1Q86SY8 53 aa6.84□□□□□ -1.31
ECHDC1-209ENST00000454591 SPATA8Q6RVD6 105 aa6.82□□□□□ -1.32
ECHDC1-209ENST00000454591 PKHD1L1Q86WI1 4243 aa6.8□□□□□ -1.32
ECHDC1-209ENST00000454591 SMR3BP02814 79 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-209ENST00000454591 KRTAP4-9Q9BYQ8 210 aa6.8□□□□□ -1.32
ECHDC1-209ENST00000454591 DYNC1H1Q14204 4646 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-209ENST00000454591 KRTAP4-2Q9BYR5 136 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms