RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 S100ZQ8WXG8 99 aa2.02□□□□□ -2.09
SBDSP1-204ENST00000453858 PSMG3Q9BT73 122 aaPredicted RBP2.02□□□□□ -2.09
SBDSP1-204ENST00000453858 ERG28Q9UKR5 140 aa2.02□□□□□ -2.09
SBDSP1-204ENST00000453858 SYNE1Q8NF91 8797 aaKnown RBP2.02□□□□□ -2.09
SBDSP1-204ENST00000453858 TRBV10-3A0A0K0K1G6 114 aa2.01□□□□□ -2.09
SBDSP1-204ENST00000453858 NAP1L6A6NFF2 107 aa2.01□□□□□ -2.09
SBDSP1-204ENST00000453858 COLCA2A8K830 154 aa2.01□□□□□ -2.09
SBDSP1-204ENST00000453858 AKR1D1P51857 326 aa2.01□□□□□ -2.09
SBDSP1-204ENST00000453858 C2orf91Q6ZV80 131 aa2.01□□□□□ -2.09
SBDSP1-204ENST00000453858 HIST3H2BBQ8N257 126 aa2.01□□□□□ -2.09
SBDSP1-204ENST00000453858 TMEM141Q96I45 108 aa2.01□□□□□ -2.09
SBDSP1-204ENST00000453858 SCGB3A1Q96QR1 104 aa2.01□□□□□ -2.09
SBDSP1-204ENST00000453858 TMEM191AQ9H0A3 160 aa2.01□□□□□ -2.09
SBDSP1-204ENST00000453858 OSTCQ9NRP0 149 aa2.01□□□□□ -2.09
SBDSP1-204ENST00000453858 CTXND1A0A1B0GTU2 59 aa2□□□□□ -2.09
SBDSP1-204ENST00000453858 A0A1B0GU33 70 aa2□□□□□ -2.09
SBDSP1-204ENST00000453858 LYRM1O43325 122 aa2□□□□□ -2.09
SBDSP1-204ENST00000453858 RPL35P42766 123 aaKnown RBP2□□□□□ -2.09
SBDSP1-204ENST00000453858 NDUFA6P56556 154 aa2□□□□□ -2.09
SBDSP1-204ENST00000453858 COX17Q14061 63 aa2□□□□□ -2.09
SBDSP1-204ENST00000453858 PP632Q6XCG6 107 aa2□□□□□ -2.09
SBDSP1-204ENST00000453858 HIST1H2BLQ99880 126 aa2□□□□□ -2.09
SBDSP1-204ENST00000453858 CYSTM1Q9H1C7 97 aa2□□□□□ -2.09
SBDSP1-204ENST00000453858 C1orf64Q8NEQ6 169 aa1.99□□□□□ -2.09
SBDSP1-204ENST00000453858 MIEN1Q9BRT3 115 aa1.99□□□□□ -2.09
SBDSP1-204ENST00000453858 NAT8Q9UHE5 227 aa1.99□□□□□ -2.09
SBDSP1-204ENST00000453858 H3BPC8 53 aa1.98□□□□□ -2.09
SBDSP1-204ENST00000453858 PPP1R17O96001 155 aa1.98□□□□□ -2.09
SBDSP1-204ENST00000453858 MT-ND4LP03901 98 aa1.98□□□□□ -2.09
SBDSP1-204ENST00000453858 IFI27P40305 119 aaPredicted RBP1.98□□□□□ -2.09
SBDSP1-204ENST00000453858 C12orf57Q99622 126 aa1.98□□□□□ -2.09
SBDSP1-204ENST00000453858 C20orf78Q9BR46 151 aa1.98□□□□□ -2.09
SBDSP1-204ENST00000453858 D6R8Y8 96 aa1.97□□□□□ -2.09
SBDSP1-204ENST00000453858 H3BMG7 143 aa1.97□□□□□ -2.09
SBDSP1-204ENST00000453858 H3BT86 120 aa1.97□□□□□ -2.09
SBDSP1-204ENST00000453858 K7ERU9 68 aa1.97□□□□□ -2.09
SBDSP1-204ENST00000453858 HIST1H2BKO60814 126 aa1.97□□□□□ -2.09
SBDSP1-204ENST00000453858 HIST1H2BJP06899 126 aa1.97□□□□□ -2.09
SBDSP1-204ENST00000453858 FABP2P12104 132 aa1.97□□□□□ -2.09
SBDSP1-204ENST00000453858 SPINK7P58062 85 aa1.97□□□□□ -2.09
SBDSP1-204ENST00000453858 FAM236AA0A1B0GUQ0 79 aa1.96□□□□□ -2.1
SBDSP1-204ENST00000453858 FAM236BA0A1B0GV22 79 aa1.96□□□□□ -2.1
SBDSP1-204ENST00000453858 J3QR89 54 aa1.96□□□□□ -2.1
SBDSP1-204ENST00000453858 S100A8P05109 93 aa1.96□□□□□ -2.1
SBDSP1-204ENST00000453858 ZNF22P17026 224 aaPredicted RBP1.96□□□□□ -2.1
SBDSP1-204ENST00000453858 H1FX-AS1Q4G0G2 97 aa1.96□□□□□ -2.1
SBDSP1-204ENST00000453858 SPINT4Q6UDR6 99 aa1.96□□□□□ -2.1
SBDSP1-204ENST00000453858 TRAV7A0A075B6U4 112 aa1.95□□□□□ -2.1
SBDSP1-204ENST00000453858 IGIPA6NJ69 53 aa1.95□□□□□ -2.1
SBDSP1-204ENST00000453858 NCR3O14931 201 aa1.95□□□□□ -2.1
SBDSP1-204ENST00000453858 SMIM6P0DI80 62 aa1.95□□□□□ -2.1
SBDSP1-204ENST00000453858 FXYD2P54710 66 aa1.95□□□□□ -2.1
SBDSP1-204ENST00000453858 KRTAP25-1Q3LHN0 102 aa1.95□□□□□ -2.1
SBDSP1-204ENST00000453858 TMEM136Q6ZRR5 245 aa1.95□□□□□ -2.1
SBDSP1-204ENST00000453858 BRK1Q8WUW1 75 aa1.95□□□□□ -2.1
SBDSP1-204ENST00000453858 PPP1R1CQ8WVI7 109 aa1.95□□□□□ -2.1
SBDSP1-204ENST00000453858 TRBV10-2A0A0K0K1G8 114 aa1.94□□□□□ -2.1
SBDSP1-204ENST00000453858 K7ERJ3 54 aa1.94□□□□□ -2.1
SBDSP1-204ENST00000453858 MPC2O95563 127 aa1.94□□□□□ -2.1
SBDSP1-204ENST00000453858 SEC11AP67812 179 aa1.94□□□□□ -2.1
SBDSP1-204ENST00000453858 ZNF345Q14585 488 aa1.94□□□□□ -2.1
SBDSP1-204ENST00000453858 KRTAP19-7Q3SYF9 63 aa1.94□□□□□ -2.1
SBDSP1-204ENST00000453858 OCIAD2Q56VL3 154 aa1.94□□□□□ -2.1
SBDSP1-204ENST00000453858 CLLU1Q5K131 121 aa1.94□□□□□ -2.1
SBDSP1-204ENST00000453858 SOSTDC1Q6X4U4 206 aa1.94□□□□□ -2.1
SBDSP1-204ENST00000453858 C7orf65Q6ZTY9 151 aa1.94□□□□□ -2.1
SBDSP1-204ENST00000453858 SMIM2Q9BVW6 85 aa1.94□□□□□ -2.1
SBDSP1-204ENST00000453858 C11orf86A6NJI1 115 aa1.93□□□□□ -2.1
SBDSP1-204ENST00000453858 SPINK8P0C7L1 97 aa1.93□□□□□ -2.1
SBDSP1-204ENST00000453858 KLKP1Q107X0 134 aa1.93□□□□□ -2.1
SBDSP1-204ENST00000453858 C14orf144Q96I85 54 aa1.93□□□□□ -2.1
SBDSP1-204ENST00000453858 PRELID3AQ96N28 172 aa1.93□□□□□ -2.1
SBDSP1-204ENST00000453858 NHP2Q9NX24 153 aaKnown RBP1.93□□□□□ -2.1
SBDSP1-204ENST00000453858 UQCRQO14949 82 aa1.92□□□□□ -2.1
SBDSP1-204ENST00000453858 MT1EP04732 61 aa1.92□□□□□ -2.1
SBDSP1-204ENST00000453858 R4GN34 69 aa1.92□□□□□ -2.1
SBDSP1-204ENST00000453858 A0A1B0GUT8 65 aa1.91□□□□□ -2.1
SBDSP1-204ENST00000453858 Q5BKY6 102 aa1.91□□□□□ -2.1
SBDSP1-204ENST00000453858 Q6ZQT0 140 aa1.91□□□□□ -2.1
SBDSP1-204ENST00000453858 TEN1Q86WV5 123 aa1.91□□□□□ -2.1
SBDSP1-204ENST00000453858 WFDC13Q8IUB5 93 aa1.91□□□□□ -2.1
SBDSP1-204ENST00000453858 TRBV7-7A0A0K0K1E9 115 aa1.9□□□□□ -2.11
SBDSP1-204ENST00000453858 TIMM17BO60830 172 aa1.9□□□□□ -2.11
SBDSP1-204ENST00000453858 MT1GP13640 62 aa1.9□□□□□ -2.11
SBDSP1-204ENST00000453858 GNG4P50150 75 aa1.9□□□□□ -2.11
SBDSP1-204ENST00000453858 RPL7L1Q6DKI1 246 aaKnown RBP1.9□□□□□ -2.11
SBDSP1-204ENST00000453858 SFT2D1Q8WV19 159 aa1.9□□□□□ -2.11
SBDSP1-204ENST00000453858 TEX49A0A1B0GTD5 131 aa1.89□□□□□ -2.11
SBDSP1-204ENST00000453858 HBDP02042 147 aa1.89□□□□□ -2.11
SBDSP1-204ENST00000453858 KCNRGQ8N5I3 272 aa1.89□□□□□ -2.11
SBDSP1-204ENST00000453858 LINC00158P58513 81 aa1.88□□□□□ -2.11
SBDSP1-204ENST00000453858 SVBPQ8N300 66 aa1.88□□□□□ -2.11
SBDSP1-204ENST00000453858 DEFB105AQ8NG35 78 aa1.88□□□□□ -2.11
SBDSP1-204ENST00000453858 CHCHD1Q96BP2 118 aaKnown RBP1.88□□□□□ -2.11
SBDSP1-204ENST00000453858 NAA38Q9BRA0 125 aaKnown RBP1.88□□□□□ -2.11
SBDSP1-204ENST00000453858 IGLV5-48A0A075B6I7 105 aa1.87□□□□□ -2.11
SBDSP1-204ENST00000453858 TMEM218A2RU14 115 aa1.87□□□□□ -2.11
SBDSP1-204ENST00000453858 HMSDA8MTL9 139 aa1.87□□□□□ -2.11
SBDSP1-204ENST00000453858 HIGD1CA8MV81 97 aa1.87□□□□□ -2.11
SBDSP1-204ENST00000453858 FABP4P15090 132 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms