RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	KRTAP13-1	Q8IUC0	172 aa		4.79	□□□□□ -1.64
HCG18-238	ENST00000449544	CSAG1	Q6PB30	78 aa		4.78	□□□□□ -1.64
HCG18-238	ENST00000449544	LINC01554	Q52M75	96 aa		4.78	□□□□□ -1.64
HCG18-238	ENST00000449544	SERP2	Q8N6R1	65 aa		4.78	□□□□□ -1.64
HCG18-238	ENST00000449544	C4orf26	Q17RF5	130 aa		4.77	□□□□□ -1.65
HCG18-238	ENST00000449544	FAM240A	A0A1B0GVK7	77 aa		4.75	□□□□□ -1.65
HCG18-238	ENST00000449544	RPL37	P61927	97 aa	Known RBP	4.75	□□□□□ -1.65
HCG18-238	ENST00000449544	SNURF	Q9Y675	71 aa		4.75	□□□□□ -1.65
HCG18-238	ENST00000449544	COX7C	P15954	63 aa		4.75	□□□□□ -1.65
HCG18-238	ENST00000449544	C20orf166-AS1	Q96NR2	134 aa		4.74	□□□□□ -1.65
HCG18-238	ENST00000449544	ACYP2	P14621	99 aa		4.72	□□□□□ -1.65
HCG18-238	ENST00000449544	PRR15L	Q9BU68	103 aa		4.72	□□□□□ -1.65
HCG18-238	ENST00000449544	CYSTM1	Q9H1C7	97 aa		4.72	□□□□□ -1.65
HCG18-238	ENST00000449544	XP32	Q5T750	250 aa		4.7	□□□□□ -1.66
HCG18-238	ENST00000449544		Q75L30	129 aa		4.69	□□□□□ -1.66
HCG18-238	ENST00000449544	VPS13C	Q709C8	3753 aa		4.68	□□□□□ -1.66
HCG18-238	ENST00000449544	TRAV7	A0A075B6U4	112 aa		4.68	□□□□□ -1.66
HCG18-238	ENST00000449544	LINC00472	Q9H8W2	130 aa		4.68	□□□□□ -1.66
HCG18-238	ENST00000449544		S4R3F8	94 aa		4.67	□□□□□ -1.66
HCG18-238	ENST00000449544		Q5XG85	94 aa		4.66	□□□□□ -1.66
HCG18-238	ENST00000449544	TMEM258	P61165	79 aa		4.66	□□□□□ -1.66
HCG18-238	ENST00000449544		H3BPC8	53 aa		4.66	□□□□□ -1.66
HCG18-238	ENST00000449544	ASB16-AS1	Q495Z4	193 aa		4.65	□□□□□ -1.66
HCG18-238	ENST00000449544	KRTAP13-3	Q3SY46	172 aa		4.64	□□□□□ -1.67
HCG18-238	ENST00000449544	MT1HL1	P0DM35	61 aa		4.63	□□□□□ -1.67
HCG18-238	ENST00000449544	MMP24-AS1	A0A0U1RRL7	71 aa		4.62	□□□□□ -1.67
HCG18-238	ENST00000449544	MPLKIP	Q8TAP9	179 aa		4.61	□□□□□ -1.67
HCG18-238	ENST00000449544	BRK1	Q8WUW1	75 aa		4.6	□□□□□ -1.67
HCG18-238	ENST00000449544	CAMK2N1	Q7Z7J9	78 aa		4.6	□□□□□ -1.67
HCG18-238	ENST00000449544		R4GN34	69 aa		4.6	□□□□□ -1.67
HCG18-238	ENST00000449544	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.6	□□□□□ -1.67
HCG18-238	ENST00000449544	DNAH9	Q9NYC9	4486 aa		4.6	□□□□□ -1.67
HCG18-238	ENST00000449544	HRES1	P13985	223 aa		4.59	□□□□□ -1.68
HCG18-238	ENST00000449544	KRTAP10-10	P60014	251 aa		4.58	□□□□□ -1.68
HCG18-238	ENST00000449544	RPS28	P62857	69 aa	Known RBP	4.58	□□□□□ -1.68
HCG18-238	ENST00000449544	H1FX-AS1	Q4G0G2	97 aa		4.58	□□□□□ -1.68
HCG18-238	ENST00000449544	LCA10	Q71F78	164 aa		4.58	□□□□□ -1.68
HCG18-238	ENST00000449544		Q5W150	140 aa		4.57	□□□□□ -1.68
HCG18-238	ENST00000449544	PRKDC	P78527	4128 aa	Known RBP	4.56	□□□□□ -1.68
HCG18-238	ENST00000449544		Q8N9P0	234 aa	Predicted RBP	4.56	□□□□□ -1.68
HCG18-238	ENST00000449544	PLAC4	Q8WY50	150 aa		4.55	□□□□□ -1.68
HCG18-238	ENST00000449544	NOTCH2NL	Q7Z3S9	236 aa		4.55	□□□□□ -1.68
HCG18-238	ENST00000449544		A0A1B0GU69	56 aa		4.55	□□□□□ -1.68
HCG18-238	ENST00000449544		A8MUN3	132 aa		4.55	□□□□□ -1.68
HCG18-238	ENST00000449544	KIAA1109	Q2LD37	5005 aa		4.53	□□□□□ -1.68
HCG18-238	ENST00000449544		A8MUU9	505 aa		4.53	□□□□□ -1.68
HCG18-238	ENST00000449544		H7BZZ5	65 aa		4.52	□□□□□ -1.69
HCG18-238	ENST00000449544	SPINT4	Q6UDR6	99 aa		4.52	□□□□□ -1.69
HCG18-238	ENST00000449544	KRTAP17-1	Q9BYP8	105 aa		4.51	□□□□□ -1.69
HCG18-238	ENST00000449544	SMIM26	A0A096LP01	95 aa		4.5	□□□□□ -1.69
HCG18-238	ENST00000449544		A0A0D9SG42	100 aa		4.49	□□□□□ -1.69
HCG18-238	ENST00000449544	CYP4F30P	Q9H0H9	118 aa		4.49	□□□□□ -1.69
HCG18-238	ENST00000449544	ATP5E	P56381	51 aa	Predicted RBP	4.49	□□□□□ -1.69
HCG18-238	ENST00000449544	PRO0628	Q9UI54	55 aa		4.49	□□□□□ -1.69
HCG18-238	ENST00000449544	KRTAP10-4	P60372	401 aa	Predicted RBP	4.49	□□□□□ -1.69
HCG18-238	ENST00000449544	BIRC6	Q9NR09	4857 aa		4.49	□□□□□ -1.69
HCG18-238	ENST00000449544	ANK2	Q01484	3957 aa		4.48	□□□□□ -1.69
HCG18-238	ENST00000449544		M0QZ58	72 aa		4.47	□□□□□ -1.69
HCG18-238	ENST00000449544	ALMS1	Q8TCU4	4167 aa		4.47	□□□□□ -1.69
HCG18-238	ENST00000449544	DNAH5	Q8TE73	4624 aa		4.47	□□□□□ -1.69
HCG18-238	ENST00000449544	RYR1	P21817	5038 aa		4.47	□□□□□ -1.69
HCG18-238	ENST00000449544		V9GYY9	64 aa		4.47	□□□□□ -1.69
HCG18-238	ENST00000449544	RYR3	Q15413	4870 aa		4.46	□□□□□ -1.69
HCG18-238	ENST00000449544		A6NED7	52 aa		4.46	□□□□□ -1.7
HCG18-238	ENST00000449544	PLEC	Q15149	4684 aa	Known RBP	4.45	□□□□□ -1.7
HCG18-238	ENST00000449544	PSPHP1	O15172	72 aa		4.45	□□□□□ -1.7
HCG18-238	ENST00000449544	DNAH11	Q96DT5	4516 aa		4.45	□□□□□ -1.7
HCG18-238	ENST00000449544	KLKP1	Q107X0	134 aa		4.43	□□□□□ -1.7
HCG18-238	ENST00000449544	HYDIN	Q4G0P3	5121 aa		4.43	□□□□□ -1.7
HCG18-238	ENST00000449544	ADM2	Q7Z4H4	148 aa		4.42	□□□□□ -1.7
HCG18-238	ENST00000449544	COA5	Q86WW8	74 aa		4.4	□□□□□ -1.71
HCG18-238	ENST00000449544	DNAH1	Q9P2D7	4330 aa		4.36	□□□□□ -1.71
HCG18-238	ENST00000449544	HERC2	O95714	4834 aa		4.35	□□□□□ -1.71
HCG18-238	ENST00000449544	DYNC1H1	Q14204	4646 aa	Known RBP	4.34	□□□□□ -1.71
HCG18-238	ENST00000449544	OCR1	Q9BZK8	76 aa		4.33	□□□□□ -1.72
HCG18-238	ENST00000449544	STARD9	Q9P2P6	4700 aa		4.33	□□□□□ -1.72
HCG18-238	ENST00000449544	PMAIP1	Q13794	54 aa		4.33	□□□□□ -1.72
HCG18-238	ENST00000449544	CSMD3	Q7Z407	3707 aa		4.31	□□□□□ -1.72
HCG18-238	ENST00000449544		A0A1B0GU33	70 aa		4.3	□□□□□ -1.72
HCG18-238	ENST00000449544	FAT1	Q14517	4588 aa		4.3	□□□□□ -1.72
HCG18-238	ENST00000449544	UQCR11	O14957	56 aa		4.3	□□□□□ -1.72
HCG18-238	ENST00000449544	RYR2	Q92736	4967 aa		4.29	□□□□□ -1.72
HCG18-238	ENST00000449544		A8MU10	97 aa		4.29	□□□□□ -1.72
HCG18-238	ENST00000449544	KMT2C	Q8NEZ4	4911 aa	Known RBP	4.28	□□□□□ -1.72
HCG18-238	ENST00000449544	SPANXA2-OT1	Q8N9U9	137 aa		4.28	□□□□□ -1.72
HCG18-238	ENST00000449544	PRO2289	Q9P1D8	64 aa		4.26	□□□□□ -1.73
HCG18-238	ENST00000449544	LRP1B	Q9NZR2	4599 aa		4.26	□□□□□ -1.73
HCG18-238	ENST00000449544	KRTAP3-3	Q9BYR6	98 aa		4.25	□□□□□ -1.73
HCG18-238	ENST00000449544	KRTAP3-2	Q9BYR7	98 aa		4.25	□□□□□ -1.73
HCG18-238	ENST00000449544	KRTAP16-1	A8MUX0	517 aa		4.23	□□□□□ -1.73
HCG18-238	ENST00000449544	DMAC1	Q96GE9	116 aa		4.22	□□□□□ -1.73
HCG18-238	ENST00000449544	VPS13D	Q5THJ4	4388 aa		4.22	□□□□□ -1.73
HCG18-238	ENST00000449544	DNAH10	Q8IVF4	4471 aa		4.22	□□□□□ -1.73
HCG18-238	ENST00000449544	SACS	Q9NZJ4	4579 aa		4.22	□□□□□ -1.73
HCG18-238	ENST00000449544	LCE2D	Q5TA82	110 aa	Predicted RBP	4.2	□□□□□ -1.74
HCG18-238	ENST00000449544		Q1T7F1	81 aa		4.2	□□□□□ -1.74
HCG18-238	ENST00000449544	MIR22HG	Q0VDD5	57 aa		4.19	□□□□□ -1.74
HCG18-238	ENST00000449544		Q5VV11	94 aa		4.19	□□□□□ -1.74
HCG18-238	ENST00000449544	CRIPT	Q9P021	101 aa		4.18	□□□□□ -1.74
HCG18-238	ENST00000449544	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.18	□□□□□ -1.74

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