RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 F8W1H4 67 aa5.2□□□□□ -1.58
RFX3-207ENST00000449190 A0A087WSZ3 146 aa5.19□□□□□ -1.58
RFX3-207ENST00000449190 LOC110117498A0A087WWA1 95 aa5.19□□□□□ -1.58
RFX3-207ENST00000449190 ASB16-AS1Q495Z4 193 aa5.18□□□□□ -1.58
RFX3-207ENST00000449190 OBSCN-AS1Q96MR7 158 aa5.18□□□□□ -1.58
RFX3-207ENST00000449190 C14orf132Q9NPU4 83 aa5.18□□□□□ -1.58
RFX3-207ENST00000449190 LRP2P98164 4655 aa5.17□□□□□ -1.58
RFX3-207ENST00000449190 A0A1B0GW54 56 aa5.17□□□□□ -1.58
RFX3-207ENST00000449190 C1orf195Q5TG92 126 aa5.17□□□□□ -1.58
RFX3-207ENST00000449190 Q6ZQT0 140 aa5.17□□□□□ -1.58
RFX3-207ENST00000449190 PRO0461Q9UI25 63 aa5.17□□□□□ -1.58
RFX3-207ENST00000449190 A0A1B0GV90 55 aa5.14□□□□□ -1.59
RFX3-207ENST00000449190 TPRXLQ17RH7 258 aa5.14□□□□□ -1.59
RFX3-207ENST00000449190 UBR4Q5T4S7 5183 aa5.14□□□□□ -1.59
RFX3-207ENST00000449190 ETDBQ3ZM63 59 aa5.12□□□□□ -1.59
RFX3-207ENST00000449190 CDIP1Q9H305 208 aa5.12□□□□□ -1.59
RFX3-207ENST00000449190 IGKV4-1P06312 121 aa5.11□□□□□ -1.59
RFX3-207ENST00000449190 NREPQ16612 68 aa5.11□□□□□ -1.59
RFX3-207ENST00000449190 H3BS24 57 aa5.1□□□□□ -1.59
RFX3-207ENST00000449190 J3KT08 172 aa5.1□□□□□ -1.59
RFX3-207ENST00000449190 SIGMAR1Q99720 223 aa5.1□□□□□ -1.59
RFX3-207ENST00000449190 KRTAP13-3Q3SY46 172 aa5.09□□□□□ -1.59
RFX3-207ENST00000449190 LINC00472Q9H8W2 130 aa5.09□□□□□ -1.59
RFX3-207ENST00000449190 C9orf92A6NGG3 77 aa5.08□□□□□ -1.6
RFX3-207ENST00000449190 DEFB116Q30KQ4 102 aa5.08□□□□□ -1.6
RFX3-207ENST00000449190 LPAP08519 4548 aa5.08□□□□□ -1.6
RFX3-207ENST00000449190 NDUFB1O75438 58 aa5.07□□□□□ -1.6
RFX3-207ENST00000449190 Q96NJ1 140 aa5.07□□□□□ -1.6
RFX3-207ENST00000449190 UBL5Q9BZL1 73 aa5.06□□□□□ -1.6
RFX3-207ENST00000449190 IGHV6-1A0A0B4J1U7 121 aa5.03□□□□□ -1.6
RFX3-207ENST00000449190 BPY2O14599 106 aa5.03□□□□□ -1.6
RFX3-207ENST00000449190 ACYP1P07311 99 aa5.03□□□□□ -1.6
RFX3-207ENST00000449190 LINC00313P59037 77 aa5.03□□□□□ -1.6
RFX3-207ENST00000449190 Q6ZVQ6 151 aa5.03□□□□□ -1.6
RFX3-207ENST00000449190 A0A0U1RQV1 116 aa5.02□□□□□ -1.61
RFX3-207ENST00000449190 A0A1B0GVX0 72 aa5.02□□□□□ -1.61
RFX3-207ENST00000449190 C8orf87E5RJ46 101 aa5.02□□□□□ -1.61
RFX3-207ENST00000449190 LINC00846Q9NV44 126 aa5.02□□□□□ -1.61
RFX3-207ENST00000449190 A8MWP4 228 aa5.01□□□□□ -1.61
RFX3-207ENST00000449190 DSCR10P59022 87 aa5.01□□□□□ -1.61
RFX3-207ENST00000449190 RNF213Q63HN8 5207 aa5□□□□□ -1.61
RFX3-207ENST00000449190 J3QR89 54 aa5□□□□□ -1.61
RFX3-207ENST00000449190 SEC61BP60468 96 aaKnown RBP5□□□□□ -1.61
RFX3-207ENST00000449190 FAM240AA0A1B0GVK7 77 aa4.98□□□□□ -1.61
RFX3-207ENST00000449190 PRR15Q8IV56 129 aa4.98□□□□□ -1.61
RFX3-207ENST00000449190 IGKV3D-7A0A0C4DH55 119 aa4.97□□□□□ -1.61
RFX3-207ENST00000449190 RPL37P61927 97 aaKnown RBP4.96□□□□□ -1.62
RFX3-207ENST00000449190 C8orf17Q9NRJ1 99 aa4.96□□□□□ -1.62
RFX3-207ENST00000449190 ATP11AUNQ6ZP68 121 aa4.95□□□□□ -1.62
RFX3-207ENST00000449190 Q75L30 129 aa4.95□□□□□ -1.62
RFX3-207ENST00000449190 K7EQZ3 153 aa4.94□□□□□ -1.62
RFX3-207ENST00000449190 CXCL6P80162 114 aa4.94□□□□□ -1.62
RFX3-207ENST00000449190 NOTCH2NLQ7Z3S9 236 aa4.94□□□□□ -1.62
RFX3-207ENST00000449190 MUC17Q685J3 4493 aa4.94□□□□□ -1.62
RFX3-207ENST00000449190 A8MUU9 505 aa4.93□□□□□ -1.62
RFX3-207ENST00000449190 PCOTHQ58A44 107 aa4.93□□□□□ -1.62
RFX3-207ENST00000449190 C20orf166-AS1Q96NR2 134 aa4.93□□□□□ -1.62
RFX3-207ENST00000449190 Q8N9L7 120 aa4.92□□□□□ -1.62
RFX3-207ENST00000449190 hDV103S1A0JD37 113 aa4.91□□□□□ -1.62
RFX3-207ENST00000449190 KRTAP16-1A8MUX0 517 aa4.91□□□□□ -1.62
RFX3-207ENST00000449190 ATP5EP2Q5VTU8 51 aa4.91□□□□□ -1.62
RFX3-207ENST00000449190 LINC00643Q86TS7 51 aa4.91□□□□□ -1.62
RFX3-207ENST00000449190 KRTAP4-1Q9BYQ7 146 aa4.91□□□□□ -1.62
RFX3-207ENST00000449190 MMP24-AS1A0A0U1RRL7 71 aa4.9□□□□□ -1.63
RFX3-207ENST00000449190 K7ERU9 68 aa4.9□□□□□ -1.63
RFX3-207ENST00000449190 TMEM254Q8TBM7 123 aa4.9□□□□□ -1.63
RFX3-207ENST00000449190 MRPL34Q9BQ48 92 aaKnown RBP4.9□□□□□ -1.63
RFX3-207ENST00000449190 NDUFS5O43920 106 aa4.89□□□□□ -1.63
RFX3-207ENST00000449190 CASC2Q6XLA1 102 aa4.89□□□□□ -1.63
RFX3-207ENST00000449190 WFDC13Q8IUB5 93 aa4.88□□□□□ -1.63
RFX3-207ENST00000449190 HCG22E2RYF7 251 aa4.87□□□□□ -1.63
RFX3-207ENST00000449190 HIST1H4AP62805 103 aaKnown RBP4.87□□□□□ -1.63
RFX3-207ENST00000449190 Q8N9P0 234 aaPredicted RBP4.87□□□□□ -1.63
RFX3-207ENST00000449190 MUC2Q02817 5179 aa4.86□□□□□ -1.63
RFX3-207ENST00000449190 KRTAP3-1Q9BYR8 98 aa4.85□□□□□ -1.63
RFX3-207ENST00000449190 ZCCHC13Q8WW36 166 aaKnown RBP4.84□□□□□ -1.63
RFX3-207ENST00000449190 FAT4Q6V0I7 4981 aa4.81□□□□□ -1.64
RFX3-207ENST00000449190 TP53AIP1Q9HCN2 124 aa4.8□□□□□ -1.64
RFX3-207ENST00000449190 A0A087WVE0 104 aa4.77□□□□□ -1.65
RFX3-207ENST00000449190 KRTAP19-2Q3LHN2 52 aa4.77□□□□□ -1.65
RFX3-207ENST00000449190 IMUPQ9GZP8 106 aa4.76□□□□□ -1.65
RFX3-207ENST00000449190 SPINK7P58062 85 aa4.75□□□□□ -1.65
RFX3-207ENST00000449190 MT-ATP8P03928 68 aa4.74□□□□□ -1.65
RFX3-207ENST00000449190 SCGB1A1P11684 91 aa4.74□□□□□ -1.65
RFX3-207ENST00000449190 Q5W150 140 aa4.74□□□□□ -1.65
RFX3-207ENST00000449190 COX6B2Q6YFQ2 88 aa4.74□□□□□ -1.65
RFX3-207ENST00000449190 UQCRQO14949 82 aa4.73□□□□□ -1.65
RFX3-207ENST00000449190 RBM12B-AS1Q9P1G2 102 aa4.73□□□□□ -1.65
RFX3-207ENST00000449190 IGKV2D-30A0A075B6S6 120 aa4.72□□□□□ -1.65
RFX3-207ENST00000449190 IGKV2-30P06310 120 aa4.72□□□□□ -1.65
RFX3-207ENST00000449190 C7orf65Q6ZTY9 151 aa4.72□□□□□ -1.65
RFX3-207ENST00000449190 FAM236DA0A1B0GTK5 79 aa4.71□□□□□ -1.66
RFX3-207ENST00000449190 FAM236CP0DP71 79 aa4.71□□□□□ -1.66
RFX3-207ENST00000449190 MT1HP80294 61 aa4.71□□□□□ -1.66
RFX3-207ENST00000449190 TRAV22A0A0B4J277 110 aa4.69□□□□□ -1.66
RFX3-207ENST00000449190 ATOX1O00244 68 aa4.68□□□□□ -1.66
RFX3-207ENST00000449190 HRES1P13985 223 aa4.68□□□□□ -1.66
RFX3-207ENST00000449190 H0Y9P7 68 aa4.67□□□□□ -1.66
RFX3-207ENST00000449190 LOC101927531A0A1B0GV80 90 aa4.66□□□□□ -1.66
RFX3-207ENST00000449190 MP68P56378 58 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms