RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 ZANQ9Y493 2812 aa6.3□□□□□ -1.4
LINC00342-202ENST00000448494 DEFB135Q30KP9 77 aa6.29□□□□□ -1.4
LINC00342-202ENST00000448494 LY6G6CO95867 125 aa6.29□□□□□ -1.4
LINC00342-202ENST00000448494 MAPK1IP1LQ8NDC0 245 aa6.28□□□□□ -1.4
LINC00342-202ENST00000448494 CUBNO60494 3623 aa6.27□□□□□ -1.41
LINC00342-202ENST00000448494 SONP18583 2426 aaKnown RBP6.27□□□□□ -1.41
LINC00342-202ENST00000448494 A0A087WTM6 91 aa6.25□□□□□ -1.41
LINC00342-202ENST00000448494 A0A096LNI7 61 aa6.25□□□□□ -1.41
LINC00342-202ENST00000448494 SPINT4Q6UDR6 99 aa6.25□□□□□ -1.41
LINC00342-202ENST00000448494 H0YAA0 97 aa6.24□□□□□ -1.41
LINC00342-202ENST00000448494 KRTAP11-1Q8IUC1 163 aa6.24□□□□□ -1.41
LINC00342-202ENST00000448494 IGKV2-30P06310 120 aa6.22□□□□□ -1.41
LINC00342-202ENST00000448494 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
LINC00342-202ENST00000448494 PANO1I0J062 215 aa6.22□□□□□ -1.41
LINC00342-202ENST00000448494 FAM229AH3BQW9 127 aa6.21□□□□□ -1.42
LINC00342-202ENST00000448494 SSBP3-AS1Q7Z2R9 100 aa6.21□□□□□ -1.42
LINC00342-202ENST00000448494 Q6ZSA8 131 aa6.2□□□□□ -1.42
LINC00342-202ENST00000448494 K7ERS5 55 aa6.17□□□□□ -1.42
LINC00342-202ENST00000448494 CRIPTQ9P021 101 aa6.16□□□□□ -1.42
LINC00342-202ENST00000448494 PSORS1C2Q9UIG4 136 aa6.16□□□□□ -1.42
LINC00342-202ENST00000448494 MEGF8Q7Z7M0 2845 aa6.15□□□□□ -1.42
LINC00342-202ENST00000448494 CHTF8P0CG12 524 aa6.15□□□□□ -1.42
LINC00342-202ENST00000448494 NBEAL2Q6ZNJ1 2754 aa6.15□□□□□ -1.43
LINC00342-202ENST00000448494 IGKV2D-30A0A075B6S6 120 aa6.14□□□□□ -1.43
LINC00342-202ENST00000448494 IGLV9-49A0A0B4J1Y8 123 aa6.14□□□□□ -1.43
LINC00342-202ENST00000448494 LUZP6Q538Z0 58 aa6.14□□□□□ -1.43
LINC00342-202ENST00000448494 ANAPC11Q9NYG5 84 aa6.14□□□□□ -1.43
LINC00342-202ENST00000448494 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.12□□□□□ -1.43
LINC00342-202ENST00000448494 A0A1B0GU33 70 aa6.11□□□□□ -1.43
LINC00342-202ENST00000448494 KRTAP13-1Q8IUC0 172 aa6.11□□□□□ -1.43
LINC00342-202ENST00000448494 H1FX-AS1Q4G0G2 97 aa6.07□□□□□ -1.44
LINC00342-202ENST00000448494 TENM1Q9UKZ4 2725 aa6.06□□□□□ -1.44
LINC00342-202ENST00000448494 MGAM2Q2M2H8 2515 aa6.05□□□□□ -1.44
LINC00342-202ENST00000448494 TGP01266 2768 aa6.05□□□□□ -1.44
LINC00342-202ENST00000448494 SPINK1P00995 79 aa6.04□□□□□ -1.44
LINC00342-202ENST00000448494 PRKDCP78527 4128 aaKnown RBP6.03□□□□□ -1.44
LINC00342-202ENST00000448494 TPRXLQ17RH7 258 aa6.03□□□□□ -1.44
LINC00342-202ENST00000448494 TRRAPQ9Y4A5 3859 aa6.03□□□□□ -1.44
LINC00342-202ENST00000448494 SEC61BP60468 96 aaKnown RBP6.03□□□□□ -1.44
LINC00342-202ENST00000448494 SPINK6Q6UWN8 80 aa6.03□□□□□ -1.44
LINC00342-202ENST00000448494 WWC2-AS2Q96NR7 200 aa6.03□□□□□ -1.44
LINC00342-202ENST00000448494 C14orf177Q52M58 125 aa6.01□□□□□ -1.45
LINC00342-202ENST00000448494 CMYA5Q8N3K9 4069 aa6.01□□□□□ -1.45
LINC00342-202ENST00000448494 NBDYA0A0U1RRE5 68 aa6□□□□□ -1.45
LINC00342-202ENST00000448494 RYR3Q15413 4870 aa5.99□□□□□ -1.45
LINC00342-202ENST00000448494 FLG2Q5D862 2391 aaPredicted RBP5.98□□□□□ -1.45
LINC00342-202ENST00000448494 PKD1L1Q8TDX9 2849 aa5.98□□□□□ -1.45
LINC00342-202ENST00000448494 TYMSOSQ8TAI1 123 aa5.98□□□□□ -1.45
LINC00342-202ENST00000448494 DNAH1Q9P2D7 4330 aa5.97□□□□□ -1.45
LINC00342-202ENST00000448494 KMT2CQ8NEZ4 4911 aaKnown RBP5.97□□□□□ -1.45
LINC00342-202ENST00000448494 SRRM2Q9UQ35 2752 aaKnown RBP5.93□□□□□ -1.46
LINC00342-202ENST00000448494 KRTAP10-3P60369 221 aa5.93□□□□□ -1.46
LINC00342-202ENST00000448494 VWFP04275 2813 aa5.92□□□□□ -1.46
LINC00342-202ENST00000448494 CSMD3Q7Z407 3707 aa5.91□□□□□ -1.46
LINC00342-202ENST00000448494 Q8N1X5 172 aa5.89□□□□□ -1.47
LINC00342-202ENST00000448494 RPL37P61927 97 aaKnown RBP5.88□□□□□ -1.47
LINC00342-202ENST00000448494 BIRC6Q9NR09 4857 aa5.87□□□□□ -1.47
LINC00342-202ENST00000448494 NOTCH1P46531 2555 aa5.86□□□□□ -1.47
LINC00342-202ENST00000448494 COX6B2Q6YFQ2 88 aa5.86□□□□□ -1.47
LINC00342-202ENST00000448494 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
LINC00342-202ENST00000448494 CIRBP-AS1Q8TBR5 109 aa5.82□□□□□ -1.48
LINC00342-202ENST00000448494 RYR2Q92736 4967 aa5.79□□□□□ -1.48
LINC00342-202ENST00000448494 EPPK1P58107 5090 aaKnown RBP5.77□□□□□ -1.49
LINC00342-202ENST00000448494 DNAH3Q8TD57 4116 aa5.77□□□□□ -1.49
LINC00342-202ENST00000448494 SPACA4Q8TDM5 124 aa5.75□□□□□ -1.49
LINC00342-202ENST00000448494 DNAH9Q9NYC9 4486 aa5.75□□□□□ -1.49
LINC00342-202ENST00000448494 DYNC2H1Q8NCM8 4307 aaKnown RBP5.75□□□□□ -1.49
LINC00342-202ENST00000448494 KRTAP1-5Q9BYS1 174 aa5.74□□□□□ -1.49
LINC00342-202ENST00000448494 KRTAP17-1Q9BYP8 105 aa5.72□□□□□ -1.49
LINC00342-202ENST00000448494 SACSQ9NZJ4 4579 aa5.71□□□□□ -1.5
LINC00342-202ENST00000448494 FRAS1Q86XX4 4008 aa5.7□□□□□ -1.5
LINC00342-202ENST00000448494 KRTAP10-11P60412 298 aa5.69□□□□□ -1.5
LINC00342-202ENST00000448494 KRTAP3-1Q9BYR8 98 aa5.68□□□□□ -1.5
LINC00342-202ENST00000448494 COL7A1Q02388 2944 aa5.67□□□□□ -1.5
LINC00342-202ENST00000448494 TENM3Q9P273 2699 aa5.66□□□□□ -1.5
LINC00342-202ENST00000448494 DNAH10Q8IVF4 4471 aa5.65□□□□□ -1.51
LINC00342-202ENST00000448494 XP32Q5T750 250 aa5.64□□□□□ -1.51
LINC00342-202ENST00000448494 DNAH8Q96JB1 4490 aa5.63□□□□□ -1.51
LINC00342-202ENST00000448494 A0A0D9SG42 100 aa5.63□□□□□ -1.51
LINC00342-202ENST00000448494 S4R3F8 94 aa5.63□□□□□ -1.51
LINC00342-202ENST00000448494 KRTAP13-4Q3LI77 160 aa5.62□□□□□ -1.51
LINC00342-202ENST00000448494 APLNQ9ULZ1 77 aa5.62□□□□□ -1.51
LINC00342-202ENST00000448494 CAMK2N1Q7Z7J9 78 aa5.61□□□□□ -1.51
LINC00342-202ENST00000448494 KRTAP10-6P60371 365 aaPredicted RBP5.6□□□□□ -1.51
LINC00342-202ENST00000448494 KRTAP3-2Q9BYR7 98 aa5.6□□□□□ -1.51
LINC00342-202ENST00000448494 LYSTQ99698 3801 aa5.6□□□□□ -1.51
LINC00342-202ENST00000448494 HERC2O95714 4834 aa5.59□□□□□ -1.52
LINC00342-202ENST00000448494 DNAH7Q8WXX0 4024 aa5.58□□□□□ -1.52
LINC00342-202ENST00000448494 PLAC4Q8WY50 150 aa5.57□□□□□ -1.52
LINC00342-202ENST00000448494 HUWE1Q7Z6Z7 4374 aaKnown RBP5.56□□□□□ -1.52
LINC00342-202ENST00000448494 HYDINQ4G0P3 5121 aa5.56□□□□□ -1.52
LINC00342-202ENST00000448494 UBE2DNLQ8IWF7 75 aa5.56□□□□□ -1.52
LINC00342-202ENST00000448494 STARD9Q9P2P6 4700 aa5.54□□□□□ -1.52
LINC00342-202ENST00000448494 KRTAP13-2Q52LG2 175 aa5.52□□□□□ -1.53
LINC00342-202ENST00000448494 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
LINC00342-202ENST00000448494 Q6ZRN7 208 aaPredicted RBP5.52□□□□□ -1.53
LINC00342-202ENST00000448494 PLECQ15149 4684 aaKnown RBP5.52□□□□□ -1.53
LINC00342-202ENST00000448494 DNAH17Q9UFH2 4485 aa5.51□□□□□ -1.53
LINC00342-202ENST00000448494 PCLOQ9Y6V0 5065 aa5.48□□□□□ -1.53
LINC00342-202ENST00000448494 STAB2Q8WWQ8 2551 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms