RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 SPANXA2-OT1Q8N9U9 137 aa3.65□□□□□ -1.83
PROM1-201ENST00000447510 IGLV5-37A0A075B6J1 123 aa3.64□□□□□ -1.83
PROM1-201ENST00000447510 PRR26Q8N8Z3 221 aa3.64□□□□□ -1.83
PROM1-201ENST00000447510 LINC01554Q52M75 96 aa3.64□□□□□ -1.83
PROM1-201ENST00000447510 SPRR4Q96PI1 79 aa3.64□□□□□ -1.83
PROM1-201ENST00000447510 DNAH1Q9P2D7 4330 aa3.63□□□□□ -1.83
PROM1-201ENST00000447510 SACSQ9NZJ4 4579 aa3.63□□□□□ -1.83
PROM1-201ENST00000447510 LYSTQ99698 3801 aa3.63□□□□□ -1.83
PROM1-201ENST00000447510 A0A1B0GW54 56 aa3.63□□□□□ -1.83
PROM1-201ENST00000447510 ZNF706Q9Y5V0 76 aaPredicted RBP3.63□□□□□ -1.83
PROM1-201ENST00000447510 KMT2AQ03164 3969 aa3.63□□□□□ -1.83
PROM1-201ENST00000447510 Q5VSD8 79 aa3.62□□□□□ -1.83
PROM1-201ENST00000447510 CDK2AP2O75956 126 aa3.62□□□□□ -1.83
PROM1-201ENST00000447510 IGLV7-43P04211 117 aa3.62□□□□□ -1.83
PROM1-201ENST00000447510 Q6ZSA8 131 aa3.62□□□□□ -1.83
PROM1-201ENST00000447510 RETNLBQ9BQ08 111 aa3.62□□□□□ -1.83
PROM1-201ENST00000447510 H3BPC8 53 aa3.61□□□□□ -1.83
PROM1-201ENST00000447510 ZNF861PO60384 105 aa3.61□□□□□ -1.83
PROM1-201ENST00000447510 SRRM2Q9UQ35 2752 aaKnown RBP3.61□□□□□ -1.83
PROM1-201ENST00000447510 FLG2Q5D862 2391 aaPredicted RBP3.61□□□□□ -1.83
PROM1-201ENST00000447510 LINC01558Q9Y6Z2 57 aa3.61□□□□□ -1.83
PROM1-201ENST00000447510 KMT2CQ8NEZ4 4911 aaKnown RBP3.61□□□□□ -1.83
PROM1-201ENST00000447510 IGLV7-46A0A075B6I9 117 aa3.61□□□□□ -1.83
PROM1-201ENST00000447510 IGHV6-1A0A0B4J1U7 121 aa3.61□□□□□ -1.83
PROM1-201ENST00000447510 KRTAP7-1Q8IUC3 87 aa3.61□□□□□ -1.83
PROM1-201ENST00000447510 RYR2Q92736 4967 aa3.6□□□□□ -1.83
PROM1-201ENST00000447510 DNAH10Q8IVF4 4471 aa3.6□□□□□ -1.83
PROM1-201ENST00000447510 IGLV8-61A0A075B6I0 122 aa3.6□□□□□ -1.83
PROM1-201ENST00000447510 IGLV9-49A0A0B4J1Y8 123 aa3.6□□□□□ -1.83
PROM1-201ENST00000447510 HYDINQ4G0P3 5121 aa3.59□□□□□ -1.83
PROM1-201ENST00000447510 A8MWP4 228 aa3.59□□□□□ -1.83
PROM1-201ENST00000447510 HRES1P13985 223 aa3.59□□□□□ -1.83
PROM1-201ENST00000447510 KRTAP11-1Q8IUC1 163 aa3.58□□□□□ -1.84
PROM1-201ENST00000447510 KRTAP29-1A8MX34 341 aaPredicted RBP3.58□□□□□ -1.84
PROM1-201ENST00000447510 SPINK6Q6UWN8 80 aa3.58□□□□□ -1.84
PROM1-201ENST00000447510 LCE2DQ5TA82 110 aaPredicted RBP3.57□□□□□ -1.84
PROM1-201ENST00000447510 CSAG1Q6PB30 78 aa3.57□□□□□ -1.84
PROM1-201ENST00000447510 Q8N1X5 172 aa3.57□□□□□ -1.84
PROM1-201ENST00000447510 A0A1B0GU69 56 aa3.57□□□□□ -1.84
PROM1-201ENST00000447510 DNAH17Q9UFH2 4485 aa3.57□□□□□ -1.84
PROM1-201ENST00000447510 ANAPC11Q9NYG5 84 aa3.57□□□□□ -1.84
PROM1-201ENST00000447510 DNAH6Q9C0G6 4158 aa3.56□□□□□ -1.84
PROM1-201ENST00000447510 DNAH2Q9P225 4427 aa3.56□□□□□ -1.84
PROM1-201ENST00000447510 SPRR1AP35321 89 aa3.56□□□□□ -1.84
PROM1-201ENST00000447510 MMP24-AS1A0A0U1RRL7 71 aa3.55□□□□□ -1.84
PROM1-201ENST00000447510 TYMSOSQ8TAI1 123 aa3.55□□□□□ -1.84
PROM1-201ENST00000447510 KRTAP4-16G5E9R7 235 aaPredicted RBP3.54□□□□□ -1.84
PROM1-201ENST00000447510 DNAH11Q96DT5 4516 aa3.54□□□□□ -1.84
PROM1-201ENST00000447510 KRTAP3-3Q9BYR6 98 aa3.53□□□□□ -1.84
PROM1-201ENST00000447510 KRTAP3-2Q9BYR7 98 aa3.53□□□□□ -1.84
PROM1-201ENST00000447510 MIR22HGQ0VDD5 57 aa3.53□□□□□ -1.84
PROM1-201ENST00000447510 DMBT1Q9UGM3 2413 aaPredicted RBP3.53□□□□□ -1.84
PROM1-201ENST00000447510 RYR3Q15413 4870 aa3.53□□□□□ -1.84
PROM1-201ENST00000447510 DNAH5Q8TE73 4624 aa3.53□□□□□ -1.84
PROM1-201ENST00000447510 TP53AIP1Q9HCN2 124 aa3.53□□□□□ -1.85
PROM1-201ENST00000447510 C8orf17Q9NRJ1 99 aa3.52□□□□□ -1.85
PROM1-201ENST00000447510 DYNC1H1Q14204 4646 aaKnown RBP3.52□□□□□ -1.85
PROM1-201ENST00000447510 LINC00472Q9H8W2 130 aa3.52□□□□□ -1.85
PROM1-201ENST00000447510 SPINK1P00995 79 aa3.52□□□□□ -1.85
PROM1-201ENST00000447510 ACYP2P14621 99 aa3.52□□□□□ -1.85
PROM1-201ENST00000447510 UQCR11O14957 56 aa3.5□□□□□ -1.85
PROM1-201ENST00000447510 LRP1BQ9NZR2 4599 aa3.5□□□□□ -1.85
PROM1-201ENST00000447510 KRTAP13-1Q8IUC0 172 aa3.49□□□□□ -1.85
PROM1-201ENST00000447510 MRPL34Q9BQ48 92 aaKnown RBP3.49□□□□□ -1.85
PROM1-201ENST00000447510 LINC00304Q8N9R0 145 aa3.49□□□□□ -1.85
PROM1-201ENST00000447510 SSBP3-AS1Q7Z2R9 100 aa3.49□□□□□ -1.85
PROM1-201ENST00000447510 FAT2Q9NYQ8 4349 aa3.48□□□□□ -1.85
PROM1-201ENST00000447510 A0A087X002 238 aa3.47□□□□□ -1.85
PROM1-201ENST00000447510 NOTCH2NLQ7Z3S9 236 aa3.47□□□□□ -1.85
PROM1-201ENST00000447510 CRIPTQ9P021 101 aa3.47□□□□□ -1.85
PROM1-201ENST00000447510 A0A1B0GVX0 72 aa3.47□□□□□ -1.85
PROM1-201ENST00000447510 HECTD4Q9Y4D8 3996 aa3.47□□□□□ -1.85
PROM1-201ENST00000447510 KIAA1109Q2LD37 5005 aa3.46□□□□□ -1.86
PROM1-201ENST00000447510 SPRR1BP22528 89 aa3.45□□□□□ -1.86
PROM1-201ENST00000447510 FRAS1Q86XX4 4008 aa3.45□□□□□ -1.86
PROM1-201ENST00000447510 PKD1P98161 4303 aa3.45□□□□□ -1.86
PROM1-201ENST00000447510 IGKV2D-30A0A075B6S6 120 aa3.45□□□□□ -1.86
PROM1-201ENST00000447510 IGKV2-30P06310 120 aa3.45□□□□□ -1.86
PROM1-201ENST00000447510 LINC00483Q53H64 154 aa3.45□□□□□ -1.86
PROM1-201ENST00000447510 Q5W150 140 aa3.45□□□□□ -1.86
PROM1-201ENST00000447510 PKHD1P08F94 4074 aa3.45□□□□□ -1.86
PROM1-201ENST00000447510 EPPK1P58107 5090 aaKnown RBP3.44□□□□□ -1.86
PROM1-201ENST00000447510 KRTAP4-5Q9BYR2 181 aa3.44□□□□□ -1.86
PROM1-201ENST00000447510 KRTAP1-4P0C5Y4 121 aa3.43□□□□□ -1.86
PROM1-201ENST00000447510 SPATA8Q6RVD6 105 aa3.43□□□□□ -1.86
PROM1-201ENST00000447510 FAT1Q14517 4588 aa3.43□□□□□ -1.86
PROM1-201ENST00000447510 KRTAP13-2Q52LG2 175 aa3.43□□□□□ -1.86
PROM1-201ENST00000447510 BIRC6Q9NR09 4857 aa3.42□□□□□ -1.86
PROM1-201ENST00000447510 KRTAP10-4P60372 401 aaPredicted RBP3.41□□□□□ -1.86
PROM1-201ENST00000447510 RYR1P21817 5038 aa3.41□□□□□ -1.86
PROM1-201ENST00000447510 DNAH8Q96JB1 4490 aa3.41□□□□□ -1.86
PROM1-201ENST00000447510 APOBP04114 4563 aaKnown RBP3.4□□□□□ -1.86
PROM1-201ENST00000447510 Q96NJ1 140 aa3.39□□□□□ -1.87
PROM1-201ENST00000447510 ROMO1P60602 79 aa3.38□□□□□ -1.87
PROM1-201ENST00000447510 ASB16-AS1Q495Z4 193 aa3.38□□□□□ -1.87
PROM1-201ENST00000447510 SPINT4Q6UDR6 99 aa3.37□□□□□ -1.87
PROM1-201ENST00000447510 DMAC1Q96GE9 116 aa3.37□□□□□ -1.87
PROM1-201ENST00000447510 KRTAP10-8P60410 259 aa3.37□□□□□ -1.87
PROM1-201ENST00000447510 KRTAP17-1Q9BYP8 105 aa3.36□□□□□ -1.87
PROM1-201ENST00000447510 HSPG2P98160 4391 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms