RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 VPS25Q9BRG1 176 aa7.9□□□□□ -1.14
SPTLC1P1-201ENST00000447199 SSPOA2VEC9 5147 aa7.89□□□□□ -1.15
SPTLC1P1-201ENST00000447199 C8orf87E5RJ46 101 aa7.89□□□□□ -1.15
SPTLC1P1-201ENST00000447199 MT2AP02795 61 aa7.89□□□□□ -1.15
SPTLC1P1-201ENST00000447199 DSCR8Q96T75 97 aa7.89□□□□□ -1.15
SPTLC1P1-201ENST00000447199 FAM236DA0A1B0GTK5 79 aa7.88□□□□□ -1.15
SPTLC1P1-201ENST00000447199 FAM236CP0DP71 79 aa7.88□□□□□ -1.15
SPTLC1P1-201ENST00000447199 BAALC-AS2P0C853 105 aa7.87□□□□□ -1.15
SPTLC1P1-201ENST00000447199 RBM12B-AS1Q9P1G2 102 aa7.87□□□□□ -1.15
SPTLC1P1-201ENST00000447199 TMA7Q9Y2S6 64 aaKnown RBP7.87□□□□□ -1.15
SPTLC1P1-201ENST00000447199 Q6ZQT0 140 aa7.85□□□□□ -1.15
SPTLC1P1-201ENST00000447199 C9JAW5 83 aa7.84□□□□□ -1.15
SPTLC1P1-201ENST00000447199 J3KT08 172 aa7.84□□□□□ -1.15
SPTLC1P1-201ENST00000447199 C21orf62-AS1Q17RA5 79 aa7.84□□□□□ -1.15
SPTLC1P1-201ENST00000447199 MT1FP04733 61 aa7.83□□□□□ -1.16
SPTLC1P1-201ENST00000447199 ZCCHC13Q8WW36 166 aaKnown RBP7.83□□□□□ -1.16
SPTLC1P1-201ENST00000447199 KRTAP4-8Q9BYQ9 185 aa7.82□□□□□ -1.16
SPTLC1P1-201ENST00000447199 Q8N9P0 234 aaPredicted RBP7.8□□□□□ -1.16
SPTLC1P1-201ENST00000447199 KRTAP9-3Q9BYQ3 159 aa7.79□□□□□ -1.16
SPTLC1P1-201ENST00000447199 LOC110117498A0A087WWA1 95 aa7.78□□□□□ -1.16
SPTLC1P1-201ENST00000447199 SPINK7P58062 85 aa7.78□□□□□ -1.16
SPTLC1P1-201ENST00000447199 A0A1B0GW54 56 aa7.77□□□□□ -1.17
SPTLC1P1-201ENST00000447199 ATXN8Q156A1 80 aa7.77□□□□□ -1.17
SPTLC1P1-201ENST00000447199 NAA38Q9BRA0 125 aaKnown RBP7.77□□□□□ -1.17
SPTLC1P1-201ENST00000447199 JMJD7-PLA2G4BH0Y9G9 81 aa7.76□□□□□ -1.17
SPTLC1P1-201ENST00000447199 NDUFB1O75438 58 aa7.76□□□□□ -1.17
SPTLC1P1-201ENST00000447199 A8MWP4 228 aa7.75□□□□□ -1.17
SPTLC1P1-201ENST00000447199 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.75□□□□□ -1.17
SPTLC1P1-201ENST00000447199 M0R143 59 aa7.75□□□□□ -1.17
SPTLC1P1-201ENST00000447199 C8orf17Q9NRJ1 99 aa7.75□□□□□ -1.17
SPTLC1P1-201ENST00000447199 IGKV3D-7A0A0C4DH55 119 aa7.74□□□□□ -1.17
SPTLC1P1-201ENST00000447199 FCGBPQ9Y6R7 5405 aaPredicted RBP7.74□□□□□ -1.17
SPTLC1P1-201ENST00000447199 KRTAP10-10P60014 251 aa7.73□□□□□ -1.17
SPTLC1P1-201ENST00000447199 MTURNQ8N3F0 131 aa7.73□□□□□ -1.17
SPTLC1P1-201ENST00000447199 PDE6GP18545 87 aa7.72□□□□□ -1.17
SPTLC1P1-201ENST00000447199 C14orf132Q9NPU4 83 aa7.7□□□□□ -1.18
SPTLC1P1-201ENST00000447199 KRTAP9-7A8MTY7 169 aa7.68□□□□□ -1.18
SPTLC1P1-201ENST00000447199 Q6ZVQ6 151 aa7.68□□□□□ -1.18
SPTLC1P1-201ENST00000447199 PRR15Q8IV56 129 aa7.68□□□□□ -1.18
SPTLC1P1-201ENST00000447199 KRTAP19-1Q8IUB9 90 aa7.67□□□□□ -1.18
SPTLC1P1-201ENST00000447199 WFDC13Q8IUB5 93 aa7.66□□□□□ -1.18
SPTLC1P1-201ENST00000447199 MMP24-AS1A0A0U1RRL7 71 aa7.64□□□□□ -1.19
SPTLC1P1-201ENST00000447199 SMIM6P0DI80 62 aa7.64□□□□□ -1.19
SPTLC1P1-201ENST00000447199 NREPQ16612 68 aa7.63□□□□□ -1.19
SPTLC1P1-201ENST00000447199 LYRM7Q5U5X0 104 aa7.63□□□□□ -1.19
SPTLC1P1-201ENST00000447199 TMEM254Q8TBM7 123 aa7.61□□□□□ -1.19
SPTLC1P1-201ENST00000447199 MRPL34Q9BQ48 92 aaKnown RBP7.6□□□□□ -1.19
SPTLC1P1-201ENST00000447199 K7EQZ3 153 aa7.57□□□□□ -1.2
SPTLC1P1-201ENST00000447199 hDV103S1A0JD37 113 aa7.56□□□□□ -1.2
SPTLC1P1-201ENST00000447199 H3BT86 120 aa7.55□□□□□ -1.2
SPTLC1P1-201ENST00000447199 BATFQ16520 125 aa7.55□□□□□ -1.2
SPTLC1P1-201ENST00000447199 C9orf118A6NHY6 69 aa7.53□□□□□ -1.2
SPTLC1P1-201ENST00000447199 TSTD3H0UI37 97 aa7.53□□□□□ -1.2
SPTLC1P1-201ENST00000447199 TAX1BP3O14907 124 aa7.52□□□□□ -1.21
SPTLC1P1-201ENST00000447199 KRTAP19-6Q3LI70 58 aa7.52□□□□□ -1.21
SPTLC1P1-201ENST00000447199 H1FX-AS1Q4G0G2 97 aa7.52□□□□□ -1.21
SPTLC1P1-201ENST00000447199 A0A1W2PPM0 123 aa7.51□□□□□ -1.21
SPTLC1P1-201ENST00000447199 Q5W150 140 aa7.5□□□□□ -1.21
SPTLC1P1-201ENST00000447199 BPY2O14599 106 aa7.48□□□□□ -1.21
SPTLC1P1-201ENST00000447199 NDUFS5O43920 106 aa7.48□□□□□ -1.21
SPTLC1P1-201ENST00000447199 LCE3BQ5TA77 95 aa7.46□□□□□ -1.22
SPTLC1P1-201ENST00000447199 KRTAP4-12Q9BQ66 201 aa7.46□□□□□ -1.22
SPTLC1P1-201ENST00000447199 IGKV2D-30A0A075B6S6 120 aa7.45□□□□□ -1.22
SPTLC1P1-201ENST00000447199 IGKV2-30P06310 120 aa7.45□□□□□ -1.22
SPTLC1P1-201ENST00000447199 MACF1Q9UPN3 7388 aaKnown RBP7.45□□□□□ -1.22
SPTLC1P1-201ENST00000447199 C7orf65Q6ZTY9 151 aa7.44□□□□□ -1.22
SPTLC1P1-201ENST00000447199 Q8N9L7 120 aa7.44□□□□□ -1.22
SPTLC1P1-201ENST00000447199 LINC00846Q9NV44 126 aa7.42□□□□□ -1.22
SPTLC1P1-201ENST00000447199 LOC105371267A0A1B0GV96 52 aa7.41□□□□□ -1.22
SPTLC1P1-201ENST00000447199 CASC2Q6XLA1 102 aa7.41□□□□□ -1.22
SPTLC1P1-201ENST00000447199 HCG22E2RYF7 251 aa7.38□□□□□ -1.23
SPTLC1P1-201ENST00000447199 SPCS1Q9Y6A9 102 aa7.37□□□□□ -1.23
SPTLC1P1-201ENST00000447199 SYNE2Q8WXH0 6885 aaKnown RBP7.35□□□□□ -1.23
SPTLC1P1-201ENST00000447199 CXCL6P80162 114 aa7.35□□□□□ -1.23
SPTLC1P1-201ENST00000447199 C4orf26Q17RF5 130 aa7.35□□□□□ -1.23
SPTLC1P1-201ENST00000447199 PRO0461Q9UI25 63 aa7.33□□□□□ -1.24
SPTLC1P1-201ENST00000447199 KRTAP3-1Q9BYR8 98 aa7.3□□□□□ -1.24
SPTLC1P1-201ENST00000447199 KRTAP9-9Q9BYP9 154 aa7.28□□□□□ -1.24
SPTLC1P1-201ENST00000447199 KRTAP9-4Q9BYQ2 154 aa7.28□□□□□ -1.24
SPTLC1P1-201ENST00000447199 UBL5Q9BZL1 73 aa7.28□□□□□ -1.24
SPTLC1P1-201ENST00000447199 COL5A1-AS1Q5SY13 56 aa7.25□□□□□ -1.25
SPTLC1P1-201ENST00000447199 K7EP34 96 aa7.24□□□□□ -1.25
SPTLC1P1-201ENST00000447199 C5orf47Q569G3 176 aa7.24□□□□□ -1.25
SPTLC1P1-201ENST00000447199 KRTAP6-3Q3LI67 103 aa7.2□□□□□ -1.26
SPTLC1P1-201ENST00000447199 S4R3F8 94 aa7.2□□□□□ -1.26
SPTLC1P1-201ENST00000447199 C1orf64Q8NEQ6 169 aa7.19□□□□□ -1.26
SPTLC1P1-201ENST00000447199 KRTAP4-8A0A0G2JLE6 195 aa7.18□□□□□ -1.26
SPTLC1P1-201ENST00000447199 LCA10Q71F78 164 aa7.18□□□□□ -1.26
SPTLC1P1-201ENST00000447199 TP53AIP1Q9HCN2 124 aa7.17□□□□□ -1.26
SPTLC1P1-201ENST00000447199 MT1BP07438 61 aa7.16□□□□□ -1.26
SPTLC1P1-201ENST00000447199 CSAG1Q6PB30 78 aa7.16□□□□□ -1.26
SPTLC1P1-201ENST00000447199 SPRR2GQ9BYE4 73 aa7.16□□□□□ -1.26
SPTLC1P1-201ENST00000447199 FAM236AA0A1B0GUQ0 79 aa7.15□□□□□ -1.26
SPTLC1P1-201ENST00000447199 FAM236BA0A1B0GV22 79 aa7.15□□□□□ -1.26
SPTLC1P1-201ENST00000447199 KRTAP19-8Q3LI54 63 aa7.13□□□□□ -1.27
SPTLC1P1-201ENST00000447199 F8W1H4 67 aa7.09□□□□□ -1.27
SPTLC1P1-201ENST00000447199 ETDBQ3ZM63 59 aa7.09□□□□□ -1.27
SPTLC1P1-201ENST00000447199 Q5VV11 94 aa7.09□□□□□ -1.27
SPTLC1P1-201ENST00000447199 GTF2H5Q6ZYL4 71 aa7.09□□□□□ -1.27
SPTLC1P1-201ENST00000447199 A6NN06 94 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms