RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 KRTAP9-6A0A140TA67 174 aa1.66□□□□□ -2.14
LINC00393-201ENST00000443621 KRTAP29-1A8MX34 341 aaPredicted RBP1.66□□□□□ -2.14
LINC00393-201ENST00000443621 NDUFS5O43920 106 aa1.66□□□□□ -2.14
LINC00393-201ENST00000443621 TMEM258P61165 79 aa1.66□□□□□ -2.14
LINC00393-201ENST00000443621 TMEM254Q8TBM7 123 aa1.66□□□□□ -2.14
LINC00393-201ENST00000443621 Q96NJ1 140 aa1.66□□□□□ -2.14
LINC00393-201ENST00000443621 KRTAP9-2Q9BYQ4 174 aa1.66□□□□□ -2.14
LINC00393-201ENST00000443621 VPS13BQ7Z7G8 4022 aa1.66□□□□□ -2.14
LINC00393-201ENST00000443621 A0A087WVE0 104 aa1.65□□□□□ -2.15
LINC00393-201ENST00000443621 A0A1B0GVX0 72 aa1.65□□□□□ -2.15
LINC00393-201ENST00000443621 K7EQZ3 153 aa1.65□□□□□ -2.15
LINC00393-201ENST00000443621 KRTAP10-4P60372 401 aaPredicted RBP1.65□□□□□ -2.15
LINC00393-201ENST00000443621 HRCT1Q6UXD1 115 aa1.65□□□□□ -2.15
LINC00393-201ENST00000443621 CASC2Q6XLA1 102 aa1.65□□□□□ -2.15
LINC00393-201ENST00000443621 NOTCH2NLQ7Z3S9 236 aa1.65□□□□□ -2.15
LINC00393-201ENST00000443621 PKHD1P08F94 4074 aa1.65□□□□□ -2.15
LINC00393-201ENST00000443621 HYDINQ4G0P3 5121 aa1.64□□□□□ -2.15
LINC00393-201ENST00000443621 A0A087X002 238 aa1.64□□□□□ -2.15
LINC00393-201ENST00000443621 hDV103S1A0JD37 113 aa1.64□□□□□ -2.15
LINC00393-201ENST00000443621 PSPHP1O15172 72 aa1.64□□□□□ -2.15
LINC00393-201ENST00000443621 MP68P56378 58 aa1.64□□□□□ -2.15
LINC00393-201ENST00000443621 KRTAP13-2Q52LG2 175 aa1.64□□□□□ -2.15
LINC00393-201ENST00000443621 XP32Q5T750 250 aa1.64□□□□□ -2.15
LINC00393-201ENST00000443621 Q8N9P0 234 aaPredicted RBP1.64□□□□□ -2.15
LINC00393-201ENST00000443621 TYMSOSQ8TAI1 123 aa1.64□□□□□ -2.15
LINC00393-201ENST00000443621 MRPL34Q9BQ48 92 aaKnown RBP1.64□□□□□ -2.15
LINC00393-201ENST00000443621 MMP24-AS1A0A0U1RRL7 71 aa1.63□□□□□ -2.15
LINC00393-201ENST00000443621 CCDC179H3BU77 68 aa1.63□□□□□ -2.15
LINC00393-201ENST00000443621 LINC00313P59037 77 aa1.63□□□□□ -2.15
LINC00393-201ENST00000443621 FP248Q71RG6 208 aaPredicted RBP1.63□□□□□ -2.15
LINC00393-201ENST00000443621 LINC00304Q8N9R0 145 aa1.63□□□□□ -2.15
LINC00393-201ENST00000443621 SPANXA2-OT1Q8N9U9 137 aa1.63□□□□□ -2.15
LINC00393-201ENST00000443621 ZCCHC13Q8WW36 166 aaKnown RBP1.63□□□□□ -2.15
LINC00393-201ENST00000443621 C8orf17Q9NRJ1 99 aa1.63□□□□□ -2.15
LINC00393-201ENST00000443621 RBM12B-AS1Q9P1G2 102 aa1.63□□□□□ -2.15
LINC00393-201ENST00000443621 DYNC1H1Q14204 4646 aaKnown RBP1.63□□□□□ -2.15
LINC00393-201ENST00000443621 APOBP04114 4563 aaKnown RBP1.62□□□□□ -2.15
LINC00393-201ENST00000443621 KMT2CQ8NEZ4 4911 aaKnown RBP1.62□□□□□ -2.15
LINC00393-201ENST00000443621 TRAV22A0A0B4J277 110 aa1.62□□□□□ -2.15
LINC00393-201ENST00000443621 H7BZZ5 65 aa1.62□□□□□ -2.15
LINC00393-201ENST00000443621 KRTAP10-8P60410 259 aa1.62□□□□□ -2.15
LINC00393-201ENST00000443621 KTN1-AS1Q86SY8 53 aa1.62□□□□□ -2.15
LINC00393-201ENST00000443621 Q8N1X5 172 aa1.62□□□□□ -2.15
LINC00393-201ENST00000443621 C20orf197Q8N268 126 aa1.62□□□□□ -2.15
LINC00393-201ENST00000443621 KRTAP9-8Q9BYQ0 159 aa1.62□□□□□ -2.15
LINC00393-201ENST00000443621 PKHD1L1Q86WI1 4243 aa1.62□□□□□ -2.15
LINC00393-201ENST00000443621 KRTAP4-8A0A0G2JLE6 195 aa1.61□□□□□ -2.15
LINC00393-201ENST00000443621 LOC101927531A0A1B0GV80 90 aa1.61□□□□□ -2.15
LINC00393-201ENST00000443621 KRTAP23-1A1A580 65 aa1.61□□□□□ -2.15
LINC00393-201ENST00000443621 KRTAP5-3Q6L8H2 238 aa1.61□□□□□ -2.15
LINC00393-201ENST00000443621 Q8N9L7 120 aa1.61□□□□□ -2.15
LINC00393-201ENST00000443621 CYP4F30PQ9H0H9 118 aa1.61□□□□□ -2.15
LINC00393-201ENST00000443621 ANAPC11Q9NYG5 84 aa1.61□□□□□ -2.15
LINC00393-201ENST00000443621 RYR2Q92736 4967 aa1.6□□□□□ -2.15
LINC00393-201ENST00000443621 SMIM26A0A096LP01 95 aa1.6□□□□□ -2.15
LINC00393-201ENST00000443621 IGHV6-1A0A0B4J1U7 121 aa1.6□□□□□ -2.15
LINC00393-201ENST00000443621 A0A0G2JQZ4 141 aa1.6□□□□□ -2.15
LINC00393-201ENST00000443621 Q5VSD8 79 aa1.6□□□□□ -2.15
LINC00393-201ENST00000443621 BRK1Q8WUW1 75 aa1.6□□□□□ -2.15
LINC00393-201ENST00000443621 IGLV7-46A0A075B6I9 117 aa1.59□□□□□ -2.15
LINC00393-201ENST00000443621 A8MUU9 505 aa1.59□□□□□ -2.15
LINC00393-201ENST00000443621 KRTAP16-1A8MUX0 517 aa1.59□□□□□ -2.15
LINC00393-201ENST00000443621 H0Y9P7 68 aa1.59□□□□□ -2.15
LINC00393-201ENST00000443621 LCE2BO14633 110 aa1.59□□□□□ -2.15
LINC00393-201ENST00000443621 SMR3BP02814 79 aaPredicted RBP1.59□□□□□ -2.15
LINC00393-201ENST00000443621 DEFB116Q30KQ4 102 aa1.59□□□□□ -2.15
LINC00393-201ENST00000443621 KRTAP13-3Q3SY46 172 aa1.59□□□□□ -2.15
LINC00393-201ENST00000443621 WFDC13Q8IUB5 93 aa1.59□□□□□ -2.15
LINC00393-201ENST00000443621 C1orf64Q8NEQ6 169 aa1.59□□□□□ -2.15
LINC00393-201ENST00000443621 C20orf166-AS1Q96NR2 134 aa1.59□□□□□ -2.15
LINC00393-201ENST00000443621 SERP1Q9Y6X1 66 aa1.59□□□□□ -2.15
LINC00393-201ENST00000443621 A8MUN3 132 aa1.58□□□□□ -2.16
LINC00393-201ENST00000443621 LCA10Q71F78 164 aa1.58□□□□□ -2.16
LINC00393-201ENST00000443621 MPLKIPQ8TAP9 179 aa1.58□□□□□ -2.16
LINC00393-201ENST00000443621 LINC00208Q96KT6 92 aa1.58□□□□□ -2.16
LINC00393-201ENST00000443621 KRTAP9-9Q9BYP9 154 aa1.58□□□□□ -2.16
LINC00393-201ENST00000443621 KRTAP9-4Q9BYQ2 154 aa1.58□□□□□ -2.16
LINC00393-201ENST00000443621 HSPG2P98160 4391 aa1.58□□□□□ -2.16
LINC00393-201ENST00000443621 FAT1Q14517 4588 aa1.57□□□□□ -2.16
LINC00393-201ENST00000443621 LCE3BQ5TA77 95 aa1.57□□□□□ -2.16
LINC00393-201ENST00000443621 KRTAP4-7Q9BYR0 210 aa1.57□□□□□ -2.16
LINC00393-201ENST00000443621 SNURFQ9Y675 71 aa1.57□□□□□ -2.16
LINC00393-201ENST00000443621 IGKV2-30P06310 120 aa1.56□□□□□ -2.16
LINC00393-201ENST00000443621 TPRXLQ17RH7 258 aa1.56□□□□□ -2.16
LINC00393-201ENST00000443621 CYSTM1Q9H1C7 97 aa1.56□□□□□ -2.16
LINC00393-201ENST00000443621 TNXBP22105 4242 aa1.55□□□□□ -2.16
LINC00393-201ENST00000443621 MT1HL1P0DM35 61 aa1.55□□□□□ -2.16
LINC00393-201ENST00000443621 ACYP2P14621 99 aa1.55□□□□□ -2.16
LINC00393-201ENST00000443621 C7orf65Q6ZTY9 151 aa1.55□□□□□ -2.16
LINC00393-201ENST00000443621 RYR3Q15413 4870 aa1.55□□□□□ -2.16
LINC00393-201ENST00000443621 FLG2Q5D862 2391 aaPredicted RBP1.55□□□□□ -2.16
LINC00393-201ENST00000443621 FAT3Q8TDW7 4589 aa1.54□□□□□ -2.16
LINC00393-201ENST00000443621 PRR4Q16378 134 aa1.54□□□□□ -2.16
LINC00393-201ENST00000443621 Q1T7F1 81 aa1.54□□□□□ -2.16
LINC00393-201ENST00000443621 Q5W150 140 aa1.54□□□□□ -2.16
LINC00393-201ENST00000443621 DMAC1Q96GE9 116 aa1.54□□□□□ -2.16
LINC00393-201ENST00000443621 RYR1P21817 5038 aa1.53□□□□□ -2.16
LINC00393-201ENST00000443621 RPL37P61927 97 aaKnown RBP1.53□□□□□ -2.16
LINC00393-201ENST00000443621 LINC01554Q52M75 96 aa1.53□□□□□ -2.16
LINC00393-201ENST00000443621 ATP11AUNQ6ZP68 121 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms