RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 MYMXA0A1B0GTQ4 84 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 TRBV6-4A0A1B0GX49 114 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 TMEM256-PLSCR3K7ERE1 68 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 CCL25O15444 150 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 TIMM17BO60830 172 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 FABP2P12104 132 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 HINT1P49773 126 aaPredicted RBP1□□□□□ -2.25
HMGB1P18-201ENST00000438801 UBE2D1P51668 147 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 UBE2D3P61077 147 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 UBE2D2P62837 147 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 SPINK13Q1W4C9 94 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 KRTAP20-2Q3LI61 65 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 ATOH7Q8N100 152 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 DYNLRB2Q8TF09 96 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 TMEM263Q8WUH6 116 aaKnown RBP1□□□□□ -2.25
HMGB1P18-201ENST00000438801 RPL39LQ96EH5 51 aaKnown RBP1□□□□□ -2.25
HMGB1P18-201ENST00000438801 DPH3Q96FX2 82 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 TTTY13Q9BZ97 58 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 IGKV3-7A0A075B6H7 116 aa0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 IGHV3-64A0A075B6Q5 118 aa0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 TRBV10-2A0A0K0K1G8 114 aa0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 F8W1H4 67 aa0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 H7C2G1 150 aa0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 IGHV3-30P01768 117 aa0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 MGPP08493 103 aa0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 SMIM13P0DJ93 91 aa0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 IGHV3-30-5P0DP03 117 aa0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 IFITM1P13164 125 aa0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 ZNF22P17026 224 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 RPL39P62891 51 aaKnown RBP0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 FAM229BQ4G0N7 80 aa0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 SFTA2Q6UW10 78 aa0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 C7orf65Q6ZTY9 151 aa0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 GTF2H5Q6ZYL4 71 aa0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 CDC42SE2Q9NRR3 84 aa0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 UBE2D4Q9Y2X8 147 aa0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 TIMM8BQ9Y5J9 83 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P18-201ENST00000438801 TRBV20-1A0A075B6N2 111 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 TRGV1A0A0A0MS02 117 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 TRBV6-8A0A0A6YYG3 113 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 LOC107984156A0A0G2JMH3 177 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 TRBV30A0A0K0K1B3 111 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 A0A1W2PPM0 123 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 ZNF815PA8K554 130 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 H3BNG1 76 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 K7EP34 96 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 NDUFA1O15239 70 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 IGHV3-33P01772 117 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 MIFP14174 115 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 RPL28P46779 137 aaKnown RBP0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 ZNF56Q15929 161 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 TMEM170BQ5T4T1 132 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 FAM74A4Q5TZK3 123 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 Q6ZQT0 140 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 Q6ZTI0 123 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 ARL17AQ8IVW1 177 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 BRK1Q8WUW1 75 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 COPS9Q8WXC6 57 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 NOP10Q9NPE3 64 aaKnown RBP0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 PRO1854Q9UHT4 67 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 PRO0255Q9UI72 69 aa0.98□□□□□ -2.25
HMGB1P18-201ENST00000438801 TRGV2A0A075B6R0 118 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 A0A087WSZ3 146 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 IBA57-AS1B1ANH7 110 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 H3BT86 120 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 H3BUT2 72 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 BAALC-AS2P0C853 105 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 SPART-AS1P0CW21 52 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 COX6A2Q02221 97 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 KRTAP25-1Q3LHN0 102 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 MEIG1Q5JSS6 88 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 ATP11AUNQ6ZP68 121 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 MUSTN1Q8IVN3 82 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 ATP6V0E2Q8NHE4 81 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 ZNF625Q96I27 306 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 HIGD2AQ9BW72 106 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 CDKN2A-AS1Q9UH64 79 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 NDUFA12Q9UI09 145 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 SPCS1Q9Y6A9 102 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 R4GN34 69 aa0.97□□□□□ -2.25
HMGB1P18-201ENST00000438801 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 GVQW2A0A096LPI5 108 aaPredicted RBP0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 TRGV4A0A0C4DH28 118 aa0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 FAM236AA0A1B0GUQ0 79 aa0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 LINC00959A0A1B0GUT2 108 aa0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 FAM236BA0A1B0GV22 79 aa0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 IGKV2-29A2NJV5 120 aaPredicted RBP0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 H0YGX0 51 aa0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 TRACP01848 142 aa0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 HTN1P15515 57 aa0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 ROMO1P60602 79 aa0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 TMEM258P61165 79 aa0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 COX17Q14061 63 aa0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 WFDC2Q14508 124 aa0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 SOSTDC1Q6X4U4 206 aa0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 Q6ZUT4 128 aa0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 Q8IZM0 81 aa0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 LINC00308Q8TCZ7 52 aa0.96□□□□□ -2.26
HMGB1P18-201ENST00000438801 Q9BRP9 147 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms