RNA–Protein interactions for RNA: ENST00000435197.2

SMG1P3-201, Transcript of SMG1 pseudogene 3, humanhuman

TSL 3

Gene SMG1P3, Length 416 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-201ENST00000435197 A0A087WSZ3 146 aa9.99□□□□□ -0.81
SMG1P3-201ENST00000435197 ETDBQ3ZM63 59 aa9.98□□□□□ -0.81
SMG1P3-201ENST00000435197 LORP23490 312 aaPredicted RBP9.93□□□□□ -0.82
SMG1P3-201ENST00000435197 C1orf195Q5TG92 126 aa9.92□□□□□ -0.82
SMG1P3-201ENST00000435197 KRTAP10-6P60371 365 aaPredicted RBP9.9□□□□□ -0.82
SMG1P3-201ENST00000435197 PCOTHQ58A44 107 aa9.84□□□□□ -0.83
SMG1P3-201ENST00000435197 NREPQ16612 68 aa9.83□□□□□ -0.84
SMG1P3-201ENST00000435197 Q96NJ1 140 aa9.83□□□□□ -0.84
SMG1P3-201ENST00000435197 LINC00472Q9H8W2 130 aa9.83□□□□□ -0.84
SMG1P3-201ENST00000435197 J3KT08 172 aa9.79□□□□□ -0.84
SMG1P3-201ENST00000435197 IGKV4-1P06312 121 aa9.79□□□□□ -0.84
SMG1P3-201ENST00000435197 KRTAP9-7A8MTY7 169 aa9.78□□□□□ -0.84
SMG1P3-201ENST00000435197 ACYP1P07311 99 aa9.77□□□□□ -0.85
SMG1P3-201ENST00000435197 M0R2T5 61 aa9.76□□□□□ -0.85
SMG1P3-201ENST00000435197 DEFB116Q30KQ4 102 aa9.76□□□□□ -0.85
SMG1P3-201ENST00000435197 SIGMAR1Q99720 223 aa9.76□□□□□ -0.85
SMG1P3-201ENST00000435197 UBL5Q9BZL1 73 aa9.76□□□□□ -0.85
SMG1P3-201ENST00000435197 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.75□□□□□ -0.85
SMG1P3-201ENST00000435197 LINC00846Q9NV44 126 aa9.75□□□□□ -0.85
SMG1P3-201ENST00000435197 Q6ZVQ6 151 aa9.74□□□□□ -0.85
SMG1P3-201ENST00000435197 FAM240AA0A1B0GVK7 77 aa9.73□□□□□ -0.85
SMG1P3-201ENST00000435197 J3QR89 54 aa9.72□□□□□ -0.85
SMG1P3-201ENST00000435197 C9orf92A6NGG3 77 aa9.71□□□□□ -0.86
SMG1P3-201ENST00000435197 NDUFB1O75438 58 aa9.7□□□□□ -0.86
SMG1P3-201ENST00000435197 BPY2O14599 106 aa9.69□□□□□ -0.86
SMG1P3-201ENST00000435197 A8MWP4 228 aa9.67□□□□□ -0.86
SMG1P3-201ENST00000435197 COX6B2Q6YFQ2 88 aa9.66□□□□□ -0.86
SMG1P3-201ENST00000435197 A0A1B0GVX0 72 aa9.65□□□□□ -0.86
SMG1P3-201ENST00000435197 IGHV6-1A0A0B4J1U7 121 aa9.64□□□□□ -0.87
SMG1P3-201ENST00000435197 LINC00313P59037 77 aa9.64□□□□□ -0.87
SMG1P3-201ENST00000435197 FLGP20930 4061 aaPredicted RBP9.62□□□□□ -0.87
SMG1P3-201ENST00000435197 C8orf87E5RJ46 101 aa9.62□□□□□ -0.87
SMG1P3-201ENST00000435197 DSCR10P59022 87 aa9.62□□□□□ -0.87
SMG1P3-201ENST00000435197 IGKV3D-7A0A0C4DH55 119 aa9.61□□□□□ -0.87
SMG1P3-201ENST00000435197 PRR15Q8IV56 129 aa9.61□□□□□ -0.87
SMG1P3-201ENST00000435197 CXCL6P80162 114 aa9.59□□□□□ -0.87
SMG1P3-201ENST00000435197 K7ERU9 68 aa9.58□□□□□ -0.88
SMG1P3-201ENST00000435197 K7EQZ3 153 aa9.56□□□□□ -0.88
SMG1P3-201ENST00000435197 RPL37P61927 97 aaKnown RBP9.55□□□□□ -0.88
SMG1P3-201ENST00000435197 ATP5EP2Q5VTU8 51 aa9.55□□□□□ -0.88
SMG1P3-201ENST00000435197 NOTCH2NLQ7Z3S9 236 aa9.54□□□□□ -0.88
SMG1P3-201ENST00000435197 LINC00643Q86TS7 51 aa9.54□□□□□ -0.88
SMG1P3-201ENST00000435197 C8orf17Q9NRJ1 99 aa9.54□□□□□ -0.88
SMG1P3-201ENST00000435197 Q8N9L7 120 aa9.51□□□□□ -0.89
SMG1P3-201ENST00000435197 SSPOA2VEC9 5147 aa9.5□□□□□ -0.89
SMG1P3-201ENST00000435197 KRTAP16-1A8MUX0 517 aa9.49□□□□□ -0.89
SMG1P3-201ENST00000435197 Q75L30 129 aa9.49□□□□□ -0.89
SMG1P3-201ENST00000435197 C20orf166-AS1Q96NR2 134 aa9.48□□□□□ -0.89
SMG1P3-201ENST00000435197 MMP24-AS1A0A0U1RRL7 71 aa9.47□□□□□ -0.89
SMG1P3-201ENST00000435197 A8MUU9 505 aa9.47□□□□□ -0.89
SMG1P3-201ENST00000435197 USH2AO75445 5202 aa9.46□□□□□ -0.89
SMG1P3-201ENST00000435197 hDV103S1A0JD37 113 aa9.45□□□□□ -0.9
SMG1P3-201ENST00000435197 TMEM254Q8TBM7 123 aa9.45□□□□□ -0.9
SMG1P3-201ENST00000435197 CASC2Q6XLA1 102 aa9.43□□□□□ -0.9
SMG1P3-201ENST00000435197 HCG22E2RYF7 251 aa9.42□□□□□ -0.9
SMG1P3-201ENST00000435197 ATP11AUNQ6ZP68 121 aa9.42□□□□□ -0.9
SMG1P3-201ENST00000435197 MRPL34Q9BQ48 92 aaKnown RBP9.42□□□□□ -0.9
SMG1P3-201ENST00000435197 Q8N9P0 234 aaPredicted RBP9.41□□□□□ -0.9
SMG1P3-201ENST00000435197 HIST1H4AP62805 103 aaKnown RBP9.4□□□□□ -0.9
SMG1P3-201ENST00000435197 WFDC13Q8IUB5 93 aa9.4□□□□□ -0.9
SMG1P3-201ENST00000435197 KRTAP9-8Q9BYQ0 159 aa9.38□□□□□ -0.91
SMG1P3-201ENST00000435197 FCGBPQ9Y6R7 5405 aaPredicted RBP9.36□□□□□ -0.91
SMG1P3-201ENST00000435197 NDUFS5O43920 106 aa9.34□□□□□ -0.91
SMG1P3-201ENST00000435197 ZCCHC13Q8WW36 166 aaKnown RBP9.29□□□□□ -0.92
SMG1P3-201ENST00000435197 IMUPQ9GZP8 106 aa9.29□□□□□ -0.92
SMG1P3-201ENST00000435197 KRTAP19-1Q8IUB9 90 aa9.28□□□□□ -0.92
SMG1P3-201ENST00000435197 A0A087WVE0 104 aa9.27□□□□□ -0.93
SMG1P3-201ENST00000435197 MT-ATP8P03928 68 aa9.26□□□□□ -0.93
SMG1P3-201ENST00000435197 TP53AIP1Q9HCN2 124 aa9.25□□□□□ -0.93
SMG1P3-201ENST00000435197 LCE2BO14633 110 aa9.2□□□□□ -0.94
SMG1P3-201ENST00000435197 MT2AP02795 61 aa9.2□□□□□ -0.94
SMG1P3-201ENST00000435197 MACF1Q9UPN3 7388 aaKnown RBP9.16□□□□□ -0.94
SMG1P3-201ENST00000435197 SCGB1A1P11684 91 aa9.15□□□□□ -0.94
SMG1P3-201ENST00000435197 Q5W150 140 aa9.15□□□□□ -0.94
SMG1P3-201ENST00000435197 SYNE2Q8WXH0 6885 aaKnown RBP9.13□□□□□ -0.95
SMG1P3-201ENST00000435197 MT1FP04733 61 aa9.13□□□□□ -0.95
SMG1P3-201ENST00000435197 UQCRQO14949 82 aa9.12□□□□□ -0.95
SMG1P3-201ENST00000435197 SPINK7P58062 85 aa9.11□□□□□ -0.95
SMG1P3-201ENST00000435197 KRTAP9-3Q9BYQ3 159 aa9.1□□□□□ -0.95
SMG1P3-201ENST00000435197 OCR1Q9BZK8 76 aa9.08□□□□□ -0.96
SMG1P3-201ENST00000435197 TRAV22A0A0B4J277 110 aa9.07□□□□□ -0.96
SMG1P3-201ENST00000435197 FAM236AA0A1B0GUQ0 79 aa9.07□□□□□ -0.96
SMG1P3-201ENST00000435197 FAM236BA0A1B0GV22 79 aa9.07□□□□□ -0.96
SMG1P3-201ENST00000435197 IGKV2D-30A0A075B6S6 120 aa9.04□□□□□ -0.96
SMG1P3-201ENST00000435197 IGKV2-30P06310 120 aa9.04□□□□□ -0.96
SMG1P3-201ENST00000435197 C7orf65Q6ZTY9 151 aa9.04□□□□□ -0.96
SMG1P3-201ENST00000435197 SMIM20Q8N5G0 67 aa9.04□□□□□ -0.96
SMG1P3-201ENST00000435197 ATOX1O00244 68 aa9.03□□□□□ -0.96
SMG1P3-201ENST00000435197 KRTAP10-10P60014 251 aa9.03□□□□□ -0.96
SMG1P3-201ENST00000435197 H0Y9P7 68 aa9.01□□□□□ -0.97
SMG1P3-201ENST00000435197 C5orf47Q569G3 176 aa9.01□□□□□ -0.97
SMG1P3-201ENST00000435197 HRES1P13985 223 aa8.99□□□□□ -0.97
SMG1P3-201ENST00000435197 MP68P56378 58 aa8.99□□□□□ -0.97
SMG1P3-201ENST00000435197 LOC101927531A0A1B0GV80 90 aa8.98□□□□□ -0.97
SMG1P3-201ENST00000435197 KRTAP19-6Q3LI70 58 aa8.98□□□□□ -0.97
SMG1P3-201ENST00000435197 RBM12B-AS1Q9P1G2 102 aa8.98□□□□□ -0.97
SMG1P3-201ENST00000435197 FAM236DA0A1B0GTK5 79 aa8.97□□□□□ -0.97
SMG1P3-201ENST00000435197 FAM236CP0DP71 79 aa8.97□□□□□ -0.97
SMG1P3-201ENST00000435197 TRAV7A0A075B6U4 112 aa8.96□□□□□ -0.98
SMG1P3-201ENST00000435197 MPLKIPQ8TAP9 179 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms