RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 VPS25Q9BRG1 176 aa7.83□□□□□ -1.16
CTDSP1-202ENST00000428361 J3KT08 172 aa7.82□□□□□ -1.16
CTDSP1-202ENST00000428361 DEFB116Q30KQ4 102 aa7.82□□□□□ -1.16
CTDSP1-202ENST00000428361 A0A1B0GVX0 72 aa7.8□□□□□ -1.16
CTDSP1-202ENST00000428361 MTURNQ8N3F0 131 aa7.8□□□□□ -1.16
CTDSP1-202ENST00000428361 C9JAW5 83 aa7.78□□□□□ -1.16
CTDSP1-202ENST00000428361 NOTCH2NLQ7Z3S9 236 aa7.78□□□□□ -1.16
CTDSP1-202ENST00000428361 NDUFB1O75438 58 aa7.77□□□□□ -1.17
CTDSP1-202ENST00000428361 KRTAP9-8Q9BYQ0 159 aa7.77□□□□□ -1.17
CTDSP1-202ENST00000428361 COL5A1-AS1Q5SY13 56 aa7.76□□□□□ -1.17
CTDSP1-202ENST00000428361 MPLKIPQ8TAP9 179 aa7.76□□□□□ -1.17
CTDSP1-202ENST00000428361 BAALC-AS2P0C853 105 aa7.75□□□□□ -1.17
CTDSP1-202ENST00000428361 HRES1P13985 223 aa7.75□□□□□ -1.17
CTDSP1-202ENST00000428361 A0A1B0GW54 56 aa7.74□□□□□ -1.17
CTDSP1-202ENST00000428361 JMJD7-PLA2G4BH0Y9G9 81 aa7.73□□□□□ -1.17
CTDSP1-202ENST00000428361 ZCCHC13Q8WW36 166 aaKnown RBP7.72□□□□□ -1.17
CTDSP1-202ENST00000428361 A0A1B0GV90 55 aa7.71□□□□□ -1.18
CTDSP1-202ENST00000428361 PDE6GP18545 87 aa7.71□□□□□ -1.18
CTDSP1-202ENST00000428361 ATXN8Q156A1 80 aa7.71□□□□□ -1.18
CTDSP1-202ENST00000428361 Q6ZQT0 140 aa7.71□□□□□ -1.18
CTDSP1-202ENST00000428361 LYRM7Q5U5X0 104 aa7.67□□□□□ -1.18
CTDSP1-202ENST00000428361 LOC110117498A0A087WWA1 95 aa7.66□□□□□ -1.18
CTDSP1-202ENST00000428361 A8MWP4 228 aa7.66□□□□□ -1.18
CTDSP1-202ENST00000428361 MT2AP02795 61 aa7.66□□□□□ -1.18
CTDSP1-202ENST00000428361 SPINK7P58062 85 aa7.66□□□□□ -1.18
CTDSP1-202ENST00000428361 Q8N9P0 234 aaPredicted RBP7.66□□□□□ -1.18
CTDSP1-202ENST00000428361 BATFQ16520 125 aa7.64□□□□□ -1.19
CTDSP1-202ENST00000428361 C8orf17Q9NRJ1 99 aa7.63□□□□□ -1.19
CTDSP1-202ENST00000428361 KRTAP10-10P60014 251 aa7.62□□□□□ -1.19
CTDSP1-202ENST00000428361 MT1FP04733 61 aa7.59□□□□□ -1.19
CTDSP1-202ENST00000428361 NREPQ16612 68 aa7.58□□□□□ -1.2
CTDSP1-202ENST00000428361 Q6ZVQ6 151 aa7.58□□□□□ -1.2
CTDSP1-202ENST00000428361 IGKV3D-7A0A0C4DH55 119 aa7.57□□□□□ -1.2
CTDSP1-202ENST00000428361 TAX1BP3O14907 124 aa7.57□□□□□ -1.2
CTDSP1-202ENST00000428361 WFDC13Q8IUB5 93 aa7.57□□□□□ -1.2
CTDSP1-202ENST00000428361 C14orf132Q9NPU4 83 aa7.57□□□□□ -1.2
CTDSP1-202ENST00000428361 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.56□□□□□ -1.2
CTDSP1-202ENST00000428361 PRR15Q8IV56 129 aa7.56□□□□□ -1.2
CTDSP1-202ENST00000428361 NAA38Q9BRA0 125 aaKnown RBP7.55□□□□□ -1.2
CTDSP1-202ENST00000428361 USH2AO75445 5202 aa7.55□□□□□ -1.2
CTDSP1-202ENST00000428361 KRTAP9-3Q9BYQ3 159 aa7.54□□□□□ -1.2
CTDSP1-202ENST00000428361 LINC00846Q9NV44 126 aa7.54□□□□□ -1.2
CTDSP1-202ENST00000428361 C9orf118A6NHY6 69 aa7.53□□□□□ -1.2
CTDSP1-202ENST00000428361 TMEM254Q8TBM7 123 aa7.53□□□□□ -1.2
CTDSP1-202ENST00000428361 KRTAP9-7A8MTY7 169 aa7.52□□□□□ -1.21
CTDSP1-202ENST00000428361 MRPL34Q9BQ48 92 aaKnown RBP7.52□□□□□ -1.21
CTDSP1-202ENST00000428361 LCE2BO14633 110 aa7.5□□□□□ -1.21
CTDSP1-202ENST00000428361 GTF2H5Q6ZYL4 71 aa7.5□□□□□ -1.21
CTDSP1-202ENST00000428361 SSPOA2VEC9 5147 aa7.49□□□□□ -1.21
CTDSP1-202ENST00000428361 hDV103S1A0JD37 113 aa7.48□□□□□ -1.21
CTDSP1-202ENST00000428361 MMP24-AS1A0A0U1RRL7 71 aa7.47□□□□□ -1.21
CTDSP1-202ENST00000428361 H3BT86 120 aa7.47□□□□□ -1.21
CTDSP1-202ENST00000428361 NDUFS5O43920 106 aa7.47□□□□□ -1.21
CTDSP1-202ENST00000428361 KRTAP19-1Q8IUB9 90 aa7.46□□□□□ -1.22
CTDSP1-202ENST00000428361 A0A1W2PPM0 123 aa7.44□□□□□ -1.22
CTDSP1-202ENST00000428361 K7EP34 96 aa7.43□□□□□ -1.22
CTDSP1-202ENST00000428361 K7EQZ3 153 aa7.43□□□□□ -1.22
CTDSP1-202ENST00000428361 BPY2O14599 106 aa7.43□□□□□ -1.22
CTDSP1-202ENST00000428361 H1FX-AS1Q4G0G2 97 aa7.43□□□□□ -1.22
CTDSP1-202ENST00000428361 C7orf65Q6ZTY9 151 aa7.4□□□□□ -1.22
CTDSP1-202ENST00000428361 SPCS1Q9Y6A9 102 aa7.4□□□□□ -1.22
CTDSP1-202ENST00000428361 FCGBPQ9Y6R7 5405 aaPredicted RBP7.38□□□□□ -1.23
CTDSP1-202ENST00000428361 IGKV2D-30A0A075B6S6 120 aa7.37□□□□□ -1.23
CTDSP1-202ENST00000428361 F8W1H4 67 aa7.37□□□□□ -1.23
CTDSP1-202ENST00000428361 IGKV2-30P06310 120 aa7.37□□□□□ -1.23
CTDSP1-202ENST00000428361 CASC2Q6XLA1 102 aa7.34□□□□□ -1.23
CTDSP1-202ENST00000428361 K7ERU9 68 aa7.33□□□□□ -1.24
CTDSP1-202ENST00000428361 KRTAP19-6Q3LI70 58 aa7.33□□□□□ -1.24
CTDSP1-202ENST00000428361 CXCL6P80162 114 aa7.31□□□□□ -1.24
CTDSP1-202ENST00000428361 HCG22E2RYF7 251 aa7.3□□□□□ -1.24
CTDSP1-202ENST00000428361 MACF1Q9UPN3 7388 aaKnown RBP7.29□□□□□ -1.24
CTDSP1-202ENST00000428361 Q5W150 140 aa7.28□□□□□ -1.24
CTDSP1-202ENST00000428361 J3QR89 54 aa7.27□□□□□ -1.25
CTDSP1-202ENST00000428361 UBL5Q9BZL1 73 aa7.27□□□□□ -1.25
CTDSP1-202ENST00000428361 Q8N9L7 120 aa7.26□□□□□ -1.25
CTDSP1-202ENST00000428361 PRO0461Q9UI25 63 aa7.25□□□□□ -1.25
CTDSP1-202ENST00000428361 C4orf26Q17RF5 130 aa7.22□□□□□ -1.25
CTDSP1-202ENST00000428361 SYNE2Q8WXH0 6885 aaKnown RBP7.18□□□□□ -1.26
CTDSP1-202ENST00000428361 ETDBQ3ZM63 59 aa7.17□□□□□ -1.26
CTDSP1-202ENST00000428361 FAM236AA0A1B0GUQ0 79 aa7.16□□□□□ -1.26
CTDSP1-202ENST00000428361 FAM236BA0A1B0GV22 79 aa7.16□□□□□ -1.26
CTDSP1-202ENST00000428361 SMCPP49901 116 aaPredicted RBP7.16□□□□□ -1.26
CTDSP1-202ENST00000428361 TP53AIP1Q9HCN2 124 aa7.15□□□□□ -1.26
CTDSP1-202ENST00000428361 S4R3F8 94 aa7.14□□□□□ -1.27
CTDSP1-202ENST00000428361 C5orf47Q569G3 176 aa7.13□□□□□ -1.27
CTDSP1-202ENST00000428361 CSAG1Q6PB30 78 aa7.13□□□□□ -1.27
CTDSP1-202ENST00000428361 C1orf64Q8NEQ6 169 aa7.11□□□□□ -1.27
CTDSP1-202ENST00000428361 SCGB1A1P11684 91 aa7.07□□□□□ -1.28
CTDSP1-202ENST00000428361 KRTAP6-3Q3LI67 103 aa7.06□□□□□ -1.28
CTDSP1-202ENST00000428361 KRTAP3-1Q9BYR8 98 aa7.04□□□□□ -1.28
CTDSP1-202ENST00000428361 FAM240AA0A1B0GVK7 77 aa7.03□□□□□ -1.28
CTDSP1-202ENST00000428361 ACYP1P07311 99 aa7.03□□□□□ -1.28
CTDSP1-202ENST00000428361 Q5VV11 94 aa7.03□□□□□ -1.28
CTDSP1-202ENST00000428361 LCA10Q71F78 164 aa7.03□□□□□ -1.28
CTDSP1-202ENST00000428361 PCP4P48539 62 aa7.02□□□□□ -1.29
CTDSP1-202ENST00000428361 A6NN06 94 aa7□□□□□ -1.29
CTDSP1-202ENST00000428361 SPRR2GQ9BYE4 73 aa6.99□□□□□ -1.29
CTDSP1-202ENST00000428361 KLKP1Q107X0 134 aa6.96□□□□□ -1.3
CTDSP1-202ENST00000428361 TRAV22A0A0B4J277 110 aa6.95□□□□□ -1.3
CTDSP1-202ENST00000428361 LOC101927531A0A1B0GV80 90 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms