RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 GTF2H5Q6ZYL4 71 aa5.13□□□□□ -1.59
PDGFC-202ENST00000422544 PRO0461Q9UI25 63 aa5.12□□□□□ -1.59
PDGFC-202ENST00000422544 C9orf92A6NGG3 77 aa5.11□□□□□ -1.59
PDGFC-202ENST00000422544 PDE6GP18545 87 aa5.11□□□□□ -1.59
PDGFC-202ENST00000422544 Q96NJ1 140 aa5.1□□□□□ -1.59
PDGFC-202ENST00000422544 DEFB116Q30KQ4 102 aa5.09□□□□□ -1.59
PDGFC-202ENST00000422544 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
PDGFC-202ENST00000422544 LINC00472Q9H8W2 130 aa5.08□□□□□ -1.6
PDGFC-202ENST00000422544 F8W1H4 67 aa5.07□□□□□ -1.6
PDGFC-202ENST00000422544 IGKV4-1P06312 121 aa5.07□□□□□ -1.6
PDGFC-202ENST00000422544 A0A1B0GW54 56 aa5.06□□□□□ -1.6
PDGFC-202ENST00000422544 SIGMAR1Q99720 223 aa5.06□□□□□ -1.6
PDGFC-202ENST00000422544 FSIP2Q5CZC0 6907 aa5.06□□□□□ -1.6
PDGFC-202ENST00000422544 A0A1B0GV90 55 aa5.04□□□□□ -1.6
PDGFC-202ENST00000422544 NREPQ16612 68 aa5.03□□□□□ -1.6
PDGFC-202ENST00000422544 ETDBQ3ZM63 59 aa5.03□□□□□ -1.6
PDGFC-202ENST00000422544 J3KT08 172 aa5.01□□□□□ -1.61
PDGFC-202ENST00000422544 DSCR10P59022 87 aa5.01□□□□□ -1.61
PDGFC-202ENST00000422544 SEC61BP60468 96 aaKnown RBP5.01□□□□□ -1.61
PDGFC-202ENST00000422544 IGHV6-1A0A0B4J1U7 121 aa5□□□□□ -1.61
PDGFC-202ENST00000422544 NOTCH2NLQ7Z3S9 236 aa5□□□□□ -1.61
PDGFC-202ENST00000422544 LINC00313P59037 77 aa4.99□□□□□ -1.61
PDGFC-202ENST00000422544 A0A1B0GVX0 72 aa4.98□□□□□ -1.61
PDGFC-202ENST00000422544 RPL37P61927 97 aaKnown RBP4.98□□□□□ -1.61
PDGFC-202ENST00000422544 PCOTHQ58A44 107 aa4.98□□□□□ -1.61
PDGFC-202ENST00000422544 LINC00846Q9NV44 126 aa4.98□□□□□ -1.61
PDGFC-202ENST00000422544 A8MWP4 228 aa4.97□□□□□ -1.61
PDGFC-202ENST00000422544 NDUFB1O75438 58 aa4.97□□□□□ -1.61
PDGFC-202ENST00000422544 Q6ZVQ6 151 aa4.97□□□□□ -1.61
PDGFC-202ENST00000422544 IGKV3D-7A0A0C4DH55 119 aa4.96□□□□□ -1.62
PDGFC-202ENST00000422544 Q75L30 129 aa4.96□□□□□ -1.62
PDGFC-202ENST00000422544 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.62
PDGFC-202ENST00000422544 KRTAP16-1A8MUX0 517 aa4.95□□□□□ -1.62
PDGFC-202ENST00000422544 C8orf87E5RJ46 101 aa4.95□□□□□ -1.62
PDGFC-202ENST00000422544 BPY2O14599 106 aa4.95□□□□□ -1.62
PDGFC-202ENST00000422544 C20orf166-AS1Q96NR2 134 aa4.95□□□□□ -1.62
PDGFC-202ENST00000422544 KRTAP9-9Q9BYP9 154 aa4.95□□□□□ -1.62
PDGFC-202ENST00000422544 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
PDGFC-202ENST00000422544 KRTAP4-1Q9BYQ7 146 aa4.95□□□□□ -1.62
PDGFC-202ENST00000422544 A8MUU9 505 aa4.94□□□□□ -1.62
PDGFC-202ENST00000422544 PRR15Q8IV56 129 aa4.94□□□□□ -1.62
PDGFC-202ENST00000422544 UBL5Q9BZL1 73 aa4.94□□□□□ -1.62
PDGFC-202ENST00000422544 ATP11AUNQ6ZP68 121 aa4.93□□□□□ -1.62
PDGFC-202ENST00000422544 C8orf17Q9NRJ1 99 aa4.93□□□□□ -1.62
PDGFC-202ENST00000422544 K7EQZ3 153 aa4.92□□□□□ -1.62
PDGFC-202ENST00000422544 Q8N9L7 120 aa4.9□□□□□ -1.63
PDGFC-202ENST00000422544 MMP24-AS1A0A0U1RRL7 71 aa4.88□□□□□ -1.63
PDGFC-202ENST00000422544 ACYP1P07311 99 aa4.88□□□□□ -1.63
PDGFC-202ENST00000422544 FAM240AA0A1B0GVK7 77 aa4.87□□□□□ -1.63
PDGFC-202ENST00000422544 Q8N9P0 234 aaPredicted RBP4.87□□□□□ -1.63
PDGFC-202ENST00000422544 hDV103S1A0JD37 113 aa4.86□□□□□ -1.63
PDGFC-202ENST00000422544 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
PDGFC-202ENST00000422544 CXCL6P80162 114 aa4.85□□□□□ -1.63
PDGFC-202ENST00000422544 TMEM254Q8TBM7 123 aa4.85□□□□□ -1.63
PDGFC-202ENST00000422544 MRPL34Q9BQ48 92 aaKnown RBP4.85□□□□□ -1.63
PDGFC-202ENST00000422544 A0A0U1RQV1 116 aa4.84□□□□□ -1.63
PDGFC-202ENST00000422544 WFDC13Q8IUB5 93 aa4.84□□□□□ -1.63
PDGFC-202ENST00000422544 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
PDGFC-202ENST00000422544 CASC2Q6XLA1 102 aa4.83□□□□□ -1.64
PDGFC-202ENST00000422544 ZCCHC13Q8WW36 166 aaKnown RBP4.83□□□□□ -1.64
PDGFC-202ENST00000422544 NDUFS5O43920 106 aa4.82□□□□□ -1.64
PDGFC-202ENST00000422544 HCG22E2RYF7 251 aa4.81□□□□□ -1.64
PDGFC-202ENST00000422544 J3QR89 54 aa4.81□□□□□ -1.64
PDGFC-202ENST00000422544 SVIPQ8NHG7 77 aa4.81□□□□□ -1.64
PDGFC-202ENST00000422544 KRTAP19-2Q3LHN2 52 aa4.79□□□□□ -1.64
PDGFC-202ENST00000422544 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
PDGFC-202ENST00000422544 ATP5EP2Q5VTU8 51 aa4.79□□□□□ -1.64
PDGFC-202ENST00000422544 LINC00643Q86TS7 51 aa4.79□□□□□ -1.64
PDGFC-202ENST00000422544 FLGP20930 4061 aaPredicted RBP4.77□□□□□ -1.65
PDGFC-202ENST00000422544 KRTAP9-7A8MTY7 169 aa4.76□□□□□ -1.65
PDGFC-202ENST00000422544 SPINK7P58062 85 aa4.76□□□□□ -1.65
PDGFC-202ENST00000422544 HIST1H4AP62805 103 aaKnown RBP4.76□□□□□ -1.65
PDGFC-202ENST00000422544 Q5W150 140 aa4.76□□□□□ -1.65
PDGFC-202ENST00000422544 SSPOA2VEC9 5147 aa4.76□□□□□ -1.65
PDGFC-202ENST00000422544 COX6B2Q6YFQ2 88 aa4.74□□□□□ -1.65
PDGFC-202ENST00000422544 A0A087WVE0 104 aa4.72□□□□□ -1.65
PDGFC-202ENST00000422544 K7ERU9 68 aa4.72□□□□□ -1.65
PDGFC-202ENST00000422544 HRES1P13985 223 aa4.72□□□□□ -1.65
PDGFC-202ENST00000422544 TP53AIP1Q9HCN2 124 aa4.7□□□□□ -1.66
PDGFC-202ENST00000422544 IGKV2D-30A0A075B6S6 120 aa4.69□□□□□ -1.66
PDGFC-202ENST00000422544 IGKV2-30P06310 120 aa4.69□□□□□ -1.66
PDGFC-202ENST00000422544 MT1HP80294 61 aa4.69□□□□□ -1.66
PDGFC-202ENST00000422544 MPLKIPQ8TAP9 179 aa4.69□□□□□ -1.66
PDGFC-202ENST00000422544 RBM12B-AS1Q9P1G2 102 aa4.69□□□□□ -1.66
PDGFC-202ENST00000422544 USH2AO75445 5202 aa4.68□□□□□ -1.66
PDGFC-202ENST00000422544 FAM236DA0A1B0GTK5 79 aa4.67□□□□□ -1.66
PDGFC-202ENST00000422544 FAM236CP0DP71 79 aa4.67□□□□□ -1.66
PDGFC-202ENST00000422544 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
PDGFC-202ENST00000422544 C7orf65Q6ZTY9 151 aa4.66□□□□□ -1.66
PDGFC-202ENST00000422544 MT-ATP8P03928 68 aa4.64□□□□□ -1.67
PDGFC-202ENST00000422544 M0R2T5 61 aa4.63□□□□□ -1.67
PDGFC-202ENST00000422544 UQCRQO14949 82 aa4.63□□□□□ -1.67
PDGFC-202ENST00000422544 KRTAP3-1Q9BYR8 98 aa4.63□□□□□ -1.67
PDGFC-202ENST00000422544 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
PDGFC-202ENST00000422544 TRAV22A0A0B4J277 110 aa4.61□□□□□ -1.67
PDGFC-202ENST00000422544 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
PDGFC-202ENST00000422544 IMUPQ9GZP8 106 aa4.61□□□□□ -1.67
PDGFC-202ENST00000422544 SCGB1A1P11684 91 aa4.6□□□□□ -1.67
PDGFC-202ENST00000422544 OCR1Q9BZK8 76 aa4.6□□□□□ -1.67
PDGFC-202ENST00000422544 H0Y9P7 68 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms