RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.62
NUP50-205ENST00000419387 A0A1W2PPM0 123 aa4.95□□□□□ -1.62
NUP50-205ENST00000419387 H3BQ85 93 aa4.95□□□□□ -1.62
NUP50-205ENST00000419387 DNAL4O96015 105 aa4.95□□□□□ -1.62
NUP50-205ENST00000419387 ATP11AUNQ6ZP68 121 aa4.95□□□□□ -1.62
NUP50-205ENST00000419387 Q75L30 129 aa4.95□□□□□ -1.62
NUP50-205ENST00000419387 TRBV20-1A0A075B6N2 111 aa4.94□□□□□ -1.62
NUP50-205ENST00000419387 ATXN8Q156A1 80 aa4.94□□□□□ -1.62
NUP50-205ENST00000419387 FLGP20930 4061 aaPredicted RBP4.93□□□□□ -1.62
NUP50-205ENST00000419387 TRBV7-4A0A0J9YYF1 115 aa4.93□□□□□ -1.62
NUP50-205ENST00000419387 PCP4L1A6NKN8 68 aa4.93□□□□□ -1.62
NUP50-205ENST00000419387 TEN1Q86WV5 123 aa4.93□□□□□ -1.62
NUP50-205ENST00000419387 SS18L2Q9UHA2 77 aa4.93□□□□□ -1.62
NUP50-205ENST00000419387 COL5A1-AS1Q5SY13 56 aa4.92□□□□□ -1.62
NUP50-205ENST00000419387 ANKRD29Q8N6D5 301 aa4.92□□□□□ -1.62
NUP50-205ENST00000419387 Q96NJ1 140 aa4.92□□□□□ -1.62
NUP50-205ENST00000419387 FSIP2Q5CZC0 6907 aa4.91□□□□□ -1.62
NUP50-205ENST00000419387 A0A1B0GV72 72 aa4.91□□□□□ -1.62
NUP50-205ENST00000419387 C9JAW5 83 aa4.9□□□□□ -1.63
NUP50-205ENST00000419387 A0A087WSZ3 146 aa4.89□□□□□ -1.63
NUP50-205ENST00000419387 RBM3P98179 157 aaKnown RBP4.89□□□□□ -1.63
NUP50-205ENST00000419387 LYRM7Q5U5X0 104 aa4.89□□□□□ -1.63
NUP50-205ENST00000419387 C20orf166-AS1Q96NR2 134 aa4.89□□□□□ -1.63
NUP50-205ENST00000419387 MTURNQ8N3F0 131 aa4.88□□□□□ -1.63
NUP50-205ENST00000419387 PRO0461Q9UI25 63 aa4.88□□□□□ -1.63
NUP50-205ENST00000419387 A8MUU9 505 aa4.87□□□□□ -1.63
NUP50-205ENST00000419387 CCKP06307 115 aa4.87□□□□□ -1.63
NUP50-205ENST00000419387 Q6ZQT0 140 aa4.87□□□□□ -1.63
NUP50-205ENST00000419387 SPCS1Q9Y6A9 102 aa4.87□□□□□ -1.63
NUP50-205ENST00000419387 LINC00472Q9H8W2 130 aa4.86□□□□□ -1.63
NUP50-205ENST00000419387 LOC110117498A0A087WWA1 95 aa4.85□□□□□ -1.63
NUP50-205ENST00000419387 JMJD7-PLA2G4BH0Y9G9 81 aa4.85□□□□□ -1.63
NUP50-205ENST00000419387 H3BT86 120 aa4.85□□□□□ -1.63
NUP50-205ENST00000419387 DSCR8Q96T75 97 aa4.85□□□□□ -1.63
NUP50-205ENST00000419387 K7EP34 96 aa4.84□□□□□ -1.63
NUP50-205ENST00000419387 DSCR10P59022 87 aa4.84□□□□□ -1.63
NUP50-205ENST00000419387 C14orf132Q9NPU4 83 aa4.84□□□□□ -1.63
NUP50-205ENST00000419387 LINC00313P59037 77 aa4.82□□□□□ -1.64
NUP50-205ENST00000419387 SIGMAR1Q99720 223 aa4.82□□□□□ -1.64
NUP50-205ENST00000419387 IGKV4-1P06312 121 aa4.81□□□□□ -1.64
NUP50-205ENST00000419387 DEFB116Q30KQ4 102 aa4.81□□□□□ -1.64
NUP50-205ENST00000419387 PDE6GP18545 87 aa4.8□□□□□ -1.64
NUP50-205ENST00000419387 NOTCH2NLQ7Z3S9 236 aa4.8□□□□□ -1.64
NUP50-205ENST00000419387 VPS25Q9BRG1 176 aa4.8□□□□□ -1.64
NUP50-205ENST00000419387 A0A1B0GW54 56 aa4.79□□□□□ -1.64
NUP50-205ENST00000419387 KRTAP16-1A8MUX0 517 aa4.79□□□□□ -1.64
NUP50-205ENST00000419387 F8W1H4 67 aa4.76□□□□□ -1.65
NUP50-205ENST00000419387 GTF2H5Q6ZYL4 71 aa4.76□□□□□ -1.65
NUP50-205ENST00000419387 IGHV6-1A0A0B4J1U7 121 aa4.75□□□□□ -1.65
NUP50-205ENST00000419387 FAM236DA0A1B0GTK5 79 aa4.74□□□□□ -1.65
NUP50-205ENST00000419387 FAM236CP0DP71 79 aa4.74□□□□□ -1.65
NUP50-205ENST00000419387 C21orf62-AS1Q17RA5 79 aa4.74□□□□□ -1.65
NUP50-205ENST00000419387 HRES1P13985 223 aa4.73□□□□□ -1.65
NUP50-205ENST00000419387 ETDBQ3ZM63 59 aa4.73□□□□□ -1.65
NUP50-205ENST00000419387 MPLKIPQ8TAP9 179 aa4.73□□□□□ -1.65
NUP50-205ENST00000419387 RBM12B-AS1Q9P1G2 102 aa4.73□□□□□ -1.65
NUP50-205ENST00000419387 A0A1B0GV90 55 aa4.72□□□□□ -1.65
NUP50-205ENST00000419387 A0A1B0GVX0 72 aa4.72□□□□□ -1.65
NUP50-205ENST00000419387 C8orf87E5RJ46 101 aa4.72□□□□□ -1.65
NUP50-205ENST00000419387 USH2AO75445 5202 aa4.71□□□□□ -1.65
NUP50-205ENST00000419387 IGKV3D-7A0A0C4DH55 119 aa4.71□□□□□ -1.66
NUP50-205ENST00000419387 J3KT08 172 aa4.71□□□□□ -1.66
NUP50-205ENST00000419387 NREPQ16612 68 aa4.71□□□□□ -1.66
NUP50-205ENST00000419387 LINC00846Q9NV44 126 aa4.7□□□□□ -1.66
NUP50-205ENST00000419387 A8MWP4 228 aa4.69□□□□□ -1.66
NUP50-205ENST00000419387 Q6ZVQ6 151 aa4.69□□□□□ -1.66
NUP50-205ENST00000419387 MT2AP02795 61 aa4.68□□□□□ -1.66
NUP50-205ENST00000419387 PRR15Q8IV56 129 aa4.68□□□□□ -1.66
NUP50-205ENST00000419387 SSPOA2VEC9 5147 aa4.68□□□□□ -1.66
NUP50-205ENST00000419387 ZCCHC13Q8WW36 166 aaKnown RBP4.67□□□□□ -1.66
NUP50-205ENST00000419387 NDUFB1O75438 58 aa4.66□□□□□ -1.66
NUP50-205ENST00000419387 Q8N9P0 234 aaPredicted RBP4.66□□□□□ -1.66
NUP50-205ENST00000419387 C8orf17Q9NRJ1 99 aa4.66□□□□□ -1.66
NUP50-205ENST00000419387 K7EQZ3 153 aa4.65□□□□□ -1.67
NUP50-205ENST00000419387 MMP24-AS1A0A0U1RRL7 71 aa4.64□□□□□ -1.67
NUP50-205ENST00000419387 MT1FP04733 61 aa4.64□□□□□ -1.67
NUP50-205ENST00000419387 SPINK7P58062 85 aa4.64□□□□□ -1.67
NUP50-205ENST00000419387 BPY2O14599 106 aa4.63□□□□□ -1.67
NUP50-205ENST00000419387 KRTAP10-10P60014 251 aa4.63□□□□□ -1.67
NUP50-205ENST00000419387 Q8N9L7 120 aa4.63□□□□□ -1.67
NUP50-205ENST00000419387 UBL5Q9BZL1 73 aa4.6□□□□□ -1.67
NUP50-205ENST00000419387 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.68
NUP50-205ENST00000419387 FAM240AA0A1B0GVK7 77 aa4.58□□□□□ -1.68
NUP50-205ENST00000419387 TMEM254Q8TBM7 123 aa4.58□□□□□ -1.68
NUP50-205ENST00000419387 MRPL34Q9BQ48 92 aaKnown RBP4.58□□□□□ -1.68
NUP50-205ENST00000419387 hDV103S1A0JD37 113 aa4.57□□□□□ -1.68
NUP50-205ENST00000419387 WFDC13Q8IUB5 93 aa4.57□□□□□ -1.68
NUP50-205ENST00000419387 ACYP1P07311 99 aa4.56□□□□□ -1.68
NUP50-205ENST00000419387 CXCL6P80162 114 aa4.56□□□□□ -1.68
NUP50-205ENST00000419387 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
NUP50-205ENST00000419387 Q5W150 140 aa4.55□□□□□ -1.68
NUP50-205ENST00000419387 CASC2Q6XLA1 102 aa4.53□□□□□ -1.68
NUP50-205ENST00000419387 HCG22E2RYF7 251 aa4.51□□□□□ -1.69
NUP50-205ENST00000419387 NDUFS5O43920 106 aa4.5□□□□□ -1.69
NUP50-205ENST00000419387 H1FX-AS1Q4G0G2 97 aa4.49□□□□□ -1.69
NUP50-205ENST00000419387 LINC00643Q86TS7 51 aa4.48□□□□□ -1.69
NUP50-205ENST00000419387 KRTAP19-6Q3LI70 58 aa4.47□□□□□ -1.69
NUP50-205ENST00000419387 ATP5EP2Q5VTU8 51 aa4.46□□□□□ -1.7
NUP50-205ENST00000419387 IGKV2D-30A0A075B6S6 120 aa4.45□□□□□ -1.7
NUP50-205ENST00000419387 IGKV2-30P06310 120 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms