RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 ASB16-AS1Q495Z4 193 aa9.64□□□□□ -0.87
SCAMP4-204ENST00000414057 LINC00472Q9H8W2 130 aa9.64□□□□□ -0.87
SCAMP4-204ENST00000414057 J3KT08 172 aa9.63□□□□□ -0.87
SCAMP4-204ENST00000414057 MUC2Q02817 5179 aa9.6□□□□□ -0.87
SCAMP4-204ENST00000414057 FP248Q71RG6 208 aaPredicted RBP9.59□□□□□ -0.87
SCAMP4-204ENST00000414057 Q96NJ1 140 aa9.58□□□□□ -0.88
SCAMP4-204ENST00000414057 SCGB1A1P11684 91 aa9.57□□□□□ -0.88
SCAMP4-204ENST00000414057 HIST1H4AP62805 103 aaKnown RBP9.57□□□□□ -0.88
SCAMP4-204ENST00000414057 DSCR10P59022 87 aa9.56□□□□□ -0.88
SCAMP4-204ENST00000414057 A8MWP4 228 aa9.53□□□□□ -0.88
SCAMP4-204ENST00000414057 IGKV4-1P06312 121 aa9.53□□□□□ -0.88
SCAMP4-204ENST00000414057 DEFB116Q30KQ4 102 aa9.53□□□□□ -0.88
SCAMP4-204ENST00000414057 NDUFB1O75438 58 aa9.53□□□□□ -0.88
SCAMP4-204ENST00000414057 K7EQZ3 153 aa9.5□□□□□ -0.89
SCAMP4-204ENST00000414057 PRR15Q8IV56 129 aa9.49□□□□□ -0.89
SCAMP4-204ENST00000414057 A0A087WVE0 104 aa9.48□□□□□ -0.89
SCAMP4-204ENST00000414057 C1orf195Q5TG92 126 aa9.48□□□□□ -0.89
SCAMP4-204ENST00000414057 Q8N9L7 120 aa9.48□□□□□ -0.89
SCAMP4-204ENST00000414057 MUC17Q685J3 4493 aa9.48□□□□□ -0.89
SCAMP4-204ENST00000414057 FAM236AA0A1B0GUQ0 79 aa9.46□□□□□ -0.9
SCAMP4-204ENST00000414057 FAM236BA0A1B0GV22 79 aa9.46□□□□□ -0.9
SCAMP4-204ENST00000414057 A0A1B0GVX0 72 aa9.44□□□□□ -0.9
SCAMP4-204ENST00000414057 KRTAP13-3Q3SY46 172 aa9.44□□□□□ -0.9
SCAMP4-204ENST00000414057 HCG22E2RYF7 251 aa9.41□□□□□ -0.9
SCAMP4-204ENST00000414057 ATOX1O00244 68 aa9.4□□□□□ -0.91
SCAMP4-204ENST00000414057 SEC61BP60468 96 aaKnown RBP9.39□□□□□ -0.91
SCAMP4-204ENST00000414057 IGHV6-1A0A0B4J1U7 121 aa9.38□□□□□ -0.91
SCAMP4-204ENST00000414057 C8orf87E5RJ46 101 aa9.38□□□□□ -0.91
SCAMP4-204ENST00000414057 C8orf17Q9NRJ1 99 aa9.37□□□□□ -0.91
SCAMP4-204ENST00000414057 LCE2AQ5TA79 106 aaPredicted RBP9.36□□□□□ -0.91
SCAMP4-204ENST00000414057 FAT4Q6V0I7 4981 aa9.36□□□□□ -0.91
SCAMP4-204ENST00000414057 MMP24-AS1A0A0U1RRL7 71 aa9.35□□□□□ -0.91
SCAMP4-204ENST00000414057 SMIM20Q8N5G0 67 aa9.35□□□□□ -0.91
SCAMP4-204ENST00000414057 CASC2Q6XLA1 102 aa9.34□□□□□ -0.91
SCAMP4-204ENST00000414057 hDV103S1A0JD37 113 aa9.33□□□□□ -0.92
SCAMP4-204ENST00000414057 WFDC13Q8IUB5 93 aa9.32□□□□□ -0.92
SCAMP4-204ENST00000414057 ANAPC13Q9BS18 74 aa9.31□□□□□ -0.92
SCAMP4-204ENST00000414057 LINC00313P59037 77 aa9.3□□□□□ -0.92
SCAMP4-204ENST00000414057 TMEM254Q8TBM7 123 aa9.3□□□□□ -0.92
SCAMP4-204ENST00000414057 XP32Q5T750 250 aa9.28□□□□□ -0.92
SCAMP4-204ENST00000414057 MRPL34Q9BQ48 92 aaKnown RBP9.26□□□□□ -0.93
SCAMP4-204ENST00000414057 TRAV7A0A075B6U4 112 aa9.25□□□□□ -0.93
SCAMP4-204ENST00000414057 NOTCH2NLQ7Z3S9 236 aa9.25□□□□□ -0.93
SCAMP4-204ENST00000414057 SERP2Q8N6R1 65 aa9.25□□□□□ -0.93
SCAMP4-204ENST00000414057 OCR1Q9BZK8 76 aa9.24□□□□□ -0.93
SCAMP4-204ENST00000414057 PCP4P48539 62 aa9.22□□□□□ -0.93
SCAMP4-204ENST00000414057 KRTAP9-2Q9BYQ4 174 aa9.22□□□□□ -0.93
SCAMP4-204ENST00000414057 TP53AIP1Q9HCN2 124 aa9.21□□□□□ -0.93
SCAMP4-204ENST00000414057 COX7CP15954 63 aa9.2□□□□□ -0.94
SCAMP4-204ENST00000414057 KRTAP16-1A8MUX0 517 aa9.18□□□□□ -0.94
SCAMP4-204ENST00000414057 UQCRQO14949 82 aa9.18□□□□□ -0.94
SCAMP4-204ENST00000414057 Q8N9P0 234 aaPredicted RBP9.18□□□□□ -0.94
SCAMP4-204ENST00000414057 KRTAP4-1Q9BYQ7 146 aa9.18□□□□□ -0.94
SCAMP4-204ENST00000414057 C9orf92A6NGG3 77 aa9.15□□□□□ -0.94
SCAMP4-204ENST00000414057 NDUFS5O43920 106 aa9.15□□□□□ -0.94
SCAMP4-204ENST00000414057 C5orf47Q569G3 176 aa9.14□□□□□ -0.95
SCAMP4-204ENST00000414057 PCOTHQ58A44 107 aa9.1□□□□□ -0.95
SCAMP4-204ENST00000414057 TRAV22A0A0B4J277 110 aa9.08□□□□□ -0.96
SCAMP4-204ENST00000414057 C20orf166-AS1Q96NR2 134 aa9.08□□□□□ -0.96
SCAMP4-204ENST00000414057 MP68P56378 58 aa9.08□□□□□ -0.96
SCAMP4-204ENST00000414057 A8MUU9 505 aa9.07□□□□□ -0.96
SCAMP4-204ENST00000414057 H3BPC8 53 aa9.07□□□□□ -0.96
SCAMP4-204ENST00000414057 CCDC179H3BU77 68 aa9.05□□□□□ -0.96
SCAMP4-204ENST00000414057 H0Y9P7 68 aa9.04□□□□□ -0.96
SCAMP4-204ENST00000414057 KLKP1Q107X0 134 aa9.03□□□□□ -0.96
SCAMP4-204ENST00000414057 Q75L30 129 aa9.03□□□□□ -0.96
SCAMP4-204ENST00000414057 C20orf197Q8N268 126 aa9.03□□□□□ -0.96
SCAMP4-204ENST00000414057 RPL37P61927 97 aaKnown RBP9.01□□□□□ -0.97
SCAMP4-204ENST00000414057 ZCCHC13Q8WW36 166 aaKnown RBP8.98□□□□□ -0.97
SCAMP4-204ENST00000414057 LCE2CQ5TA81 110 aa8.97□□□□□ -0.97
SCAMP4-204ENST00000414057 Q5W150 140 aa8.97□□□□□ -0.97
SCAMP4-204ENST00000414057 NDUFC1O43677 76 aa8.96□□□□□ -0.97
SCAMP4-204ENST00000414057 LINC00208Q96KT6 92 aa8.96□□□□□ -0.97
SCAMP4-204ENST00000414057 C1orf64Q8NEQ6 169 aa8.96□□□□□ -0.98
SCAMP4-204ENST00000414057 KRTAP9-6A0A140TA67 174 aa8.95□□□□□ -0.98
SCAMP4-204ENST00000414057 LOC101927531A0A1B0GV80 90 aa8.95□□□□□ -0.98
SCAMP4-204ENST00000414057 SNURFQ9Y675 71 aa8.95□□□□□ -0.98
SCAMP4-204ENST00000414057 KRTAP19-2Q3LHN2 52 aa8.94□□□□□ -0.98
SCAMP4-204ENST00000414057 LCE2DQ5TA82 110 aaPredicted RBP8.92□□□□□ -0.98
SCAMP4-204ENST00000414057 MT1HP80294 61 aa8.91□□□□□ -0.98
SCAMP4-204ENST00000414057 ATP11AUNQ6ZP68 121 aa8.9□□□□□ -0.98
SCAMP4-204ENST00000414057 COX6B2Q6YFQ2 88 aa8.88□□□□□ -0.99
SCAMP4-204ENST00000414057 IGKV2-30P06310 120 aa8.86□□□□□ -0.99
SCAMP4-204ENST00000414057 CYSTM1Q9H1C7 97 aa8.86□□□□□ -0.99
SCAMP4-204ENST00000414057 H7BZZ5 65 aa8.85□□□□□ -0.99
SCAMP4-204ENST00000414057 CYP4F30PQ9H0H9 118 aa8.84□□□□□ -0.99
SCAMP4-204ENST00000414057 M0R2T5 61 aa8.83□□□□□ -1
SCAMP4-204ENST00000414057 C7orf65Q6ZTY9 151 aa8.83□□□□□ -1
SCAMP4-204ENST00000414057 TMEM258P61165 79 aa8.82□□□□□ -1
SCAMP4-204ENST00000414057 IGKV2D-30A0A075B6S6 120 aa8.8□□□□□ -1
SCAMP4-204ENST00000414057 ATP5EP56381 51 aaPredicted RBP8.77□□□□□ -1.01
SCAMP4-204ENST00000414057 SPANXA2-OT1Q8N9U9 137 aa8.77□□□□□ -1.01
SCAMP4-204ENST00000414057 KRTAP10-6P60371 365 aaPredicted RBP8.76□□□□□ -1.01
SCAMP4-204ENST00000414057 LORP23490 312 aaPredicted RBP8.75□□□□□ -1.01
SCAMP4-204ENST00000414057 SPINK7P58062 85 aa8.73□□□□□ -1.01
SCAMP4-204ENST00000414057 FAM236DA0A1B0GTK5 79 aa8.71□□□□□ -1.01
SCAMP4-204ENST00000414057 FAM236CP0DP71 79 aa8.71□□□□□ -1.01
SCAMP4-204ENST00000414057 CRCT1Q9UGL9 99 aa8.71□□□□□ -1.01
SCAMP4-204ENST00000414057 FSIP2Q5CZC0 6907 aa8.68□□□□□ -1.02
SCAMP4-204ENST00000414057 HRES1P13985 223 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms