RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ST20-AS1Q8NBB2 130 aa5.81□□□□□ -1.48
SNHG3-201ENST00000413987 C20orf166-AS1Q96NR2 134 aa5.81□□□□□ -1.48
SNHG3-201ENST00000413987 Q9BRP9 147 aa5.81□□□□□ -1.48
SNHG3-201ENST00000413987 MOBPQ13875 183 aa5.8□□□□□ -1.48
SNHG3-201ENST00000413987 CHKB-CPT1BH3BT56 60 aa5.8□□□□□ -1.48
SNHG3-201ENST00000413987 MIR22HGQ0VDD5 57 aa5.8□□□□□ -1.48
SNHG3-201ENST00000413987 KRTAP26-1Q6PEX3 210 aa5.8□□□□□ -1.48
SNHG3-201ENST00000413987 LINC00208Q96KT6 92 aa5.79□□□□□ -1.48
SNHG3-201ENST00000413987 FRAS1Q86XX4 4008 aa5.79□□□□□ -1.48
SNHG3-201ENST00000413987 KMT2CQ8NEZ4 4911 aaKnown RBP5.79□□□□□ -1.48
SNHG3-201ENST00000413987 Q6ZRX8 168 aa5.79□□□□□ -1.48
SNHG3-201ENST00000413987 Q8N9P0 234 aaPredicted RBP5.79□□□□□ -1.48
SNHG3-201ENST00000413987 LY6G6CO95867 125 aa5.78□□□□□ -1.48
SNHG3-201ENST00000413987 A8MU10 97 aa5.77□□□□□ -1.49
SNHG3-201ENST00000413987 KRTAP3-1Q9BYR8 98 aa5.77□□□□□ -1.49
SNHG3-201ENST00000413987 A0A087WSZ3 146 aa5.76□□□□□ -1.49
SNHG3-201ENST00000413987 SACSQ9NZJ4 4579 aa5.76□□□□□ -1.49
SNHG3-201ENST00000413987 HECTD4Q9Y4D8 3996 aa5.76□□□□□ -1.49
SNHG3-201ENST00000413987 PANO1I0J062 215 aa5.76□□□□□ -1.49
SNHG3-201ENST00000413987 NBDYA0A0U1RRE5 68 aa5.75□□□□□ -1.49
SNHG3-201ENST00000413987 PRR15LQ9BU68 103 aa5.75□□□□□ -1.49
SNHG3-201ENST00000413987 ALMS1Q8TCU4 4167 aa5.75□□□□□ -1.49
SNHG3-201ENST00000413987 LOC101927531A0A1B0GV80 90 aa5.75□□□□□ -1.49
SNHG3-201ENST00000413987 SPRR1AP35321 89 aa5.75□□□□□ -1.49
SNHG3-201ENST00000413987 P0C880 135 aa5.74□□□□□ -1.49
SNHG3-201ENST00000413987 H0Y9P7 68 aa5.73□□□□□ -1.49
SNHG3-201ENST00000413987 Q6ZR54 194 aa5.72□□□□□ -1.49
SNHG3-201ENST00000413987 WFDC13Q8IUB5 93 aa5.72□□□□□ -1.49
SNHG3-201ENST00000413987 DNAH6Q9C0G6 4158 aa5.72□□□□□ -1.49
SNHG3-201ENST00000413987 KRTAP29-1A8MX34 341 aaPredicted RBP5.71□□□□□ -1.49
SNHG3-201ENST00000413987 C9orf163Q8N9P6 203 aa5.7□□□□□ -1.5
SNHG3-201ENST00000413987 FAT2Q9NYQ8 4349 aa5.7□□□□□ -1.5
SNHG3-201ENST00000413987 Q6ZRN7 208 aaPredicted RBP5.7□□□□□ -1.5
SNHG3-201ENST00000413987 DNAH17Q9UFH2 4485 aa5.69□□□□□ -1.5
SNHG3-201ENST00000413987 COA5Q86WW8 74 aa5.68□□□□□ -1.5
SNHG3-201ENST00000413987 IGFL1Q6UW32 110 aa5.68□□□□□ -1.5
SNHG3-201ENST00000413987 DEFB116Q30KQ4 102 aa5.67□□□□□ -1.5
SNHG3-201ENST00000413987 DNAH11Q96DT5 4516 aa5.67□□□□□ -1.5
SNHG3-201ENST00000413987 RYR2Q92736 4967 aa5.67□□□□□ -1.5
SNHG3-201ENST00000413987 PKHD1P08F94 4074 aa5.67□□□□□ -1.5
SNHG3-201ENST00000413987 LINC01558Q9Y6Z2 57 aa5.66□□□□□ -1.5
SNHG3-201ENST00000413987 RYR3Q15413 4870 aa5.66□□□□□ -1.5
SNHG3-201ENST00000413987 PKD1P98161 4303 aa5.66□□□□□ -1.5
SNHG3-201ENST00000413987 IGLV7-43P04211 117 aa5.66□□□□□ -1.5
SNHG3-201ENST00000413987 LINC00483Q53H64 154 aa5.65□□□□□ -1.5
SNHG3-201ENST00000413987 DNAH5Q8TE73 4624 aa5.64□□□□□ -1.51
SNHG3-201ENST00000413987 CNBPP62633 177 aaKnown RBP5.63□□□□□ -1.51
SNHG3-201ENST00000413987 RPL37AP61513 92 aaKnown RBP5.63□□□□□ -1.51
SNHG3-201ENST00000413987 PLAC8Q9NZF1 115 aa5.63□□□□□ -1.51
SNHG3-201ENST00000413987 FAM168BA1KXE4 195 aa5.62□□□□□ -1.51
SNHG3-201ENST00000413987 NDUFAF8A1L188 74 aa5.62□□□□□ -1.51
SNHG3-201ENST00000413987 RTL8CO15255 209 aa5.62□□□□□ -1.51
SNHG3-201ENST00000413987 A0A087WTM6 91 aa5.62□□□□□ -1.51
SNHG3-201ENST00000413987 CSAG1Q6PB30 78 aa5.61□□□□□ -1.51
SNHG3-201ENST00000413987 TP53AIP1Q9HCN2 124 aa5.61□□□□□ -1.51
SNHG3-201ENST00000413987 IGKV2-24A0A0C4DH68 120 aa5.6□□□□□ -1.51
SNHG3-201ENST00000413987 Q5W150 140 aa5.6□□□□□ -1.51
SNHG3-201ENST00000413987 TYMSOSQ8TAI1 123 aa5.6□□□□□ -1.51
SNHG3-201ENST00000413987 A0A1B0GU33 70 aa5.6□□□□□ -1.51
SNHG3-201ENST00000413987 KRTAP7-1Q8IUC3 87 aa5.59□□□□□ -1.51
SNHG3-201ENST00000413987 LINC00472Q9H8W2 130 aa5.59□□□□□ -1.51
SNHG3-201ENST00000413987 A0A096LNI7 61 aa5.59□□□□□ -1.52
SNHG3-201ENST00000413987 A0A0G2JQZ4 141 aa5.58□□□□□ -1.52
SNHG3-201ENST00000413987 A0A1W2PNN7 141 aa5.58□□□□□ -1.52
SNHG3-201ENST00000413987 DNAH8Q96JB1 4490 aa5.58□□□□□ -1.52
SNHG3-201ENST00000413987 KRTAP10-2P60368 255 aa5.58□□□□□ -1.52
SNHG3-201ENST00000413987 SPAG11AQ6PDA7 123 aa5.58□□□□□ -1.52
SNHG3-201ENST00000413987 SRRM2Q9UQ35 2752 aaKnown RBP5.57□□□□□ -1.52
SNHG3-201ENST00000413987 MMP24-AS1A0A0U1RRL7 71 aa5.56□□□□□ -1.52
SNHG3-201ENST00000413987 SPRR1BP22528 89 aa5.56□□□□□ -1.52
SNHG3-201ENST00000413987 C14orf177Q52M58 125 aa5.56□□□□□ -1.52
SNHG3-201ENST00000413987 PCOTHQ58A44 107 aa5.55□□□□□ -1.52
SNHG3-201ENST00000413987 SPINK7P58062 85 aa5.53□□□□□ -1.52
SNHG3-201ENST00000413987 PRLHP81277 87 aa5.53□□□□□ -1.52
SNHG3-201ENST00000413987 LRP1BQ9NZR2 4599 aa5.52□□□□□ -1.53
SNHG3-201ENST00000413987 HRES1P13985 223 aa5.51□□□□□ -1.53
SNHG3-201ENST00000413987 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
SNHG3-201ENST00000413987 DYNC1H1Q14204 4646 aaKnown RBP5.5□□□□□ -1.53
SNHG3-201ENST00000413987 KRTAP11-1Q8IUC1 163 aa5.5□□□□□ -1.53
SNHG3-201ENST00000413987 DMAC1Q96GE9 116 aa5.49□□□□□ -1.53
SNHG3-201ENST00000413987 KRTAP10-1P60331 282 aa5.48□□□□□ -1.53
SNHG3-201ENST00000413987 SPACA4Q8TDM5 124 aa5.48□□□□□ -1.53
SNHG3-201ENST00000413987 EPPK1P58107 5090 aaKnown RBP5.46□□□□□ -1.54
SNHG3-201ENST00000413987 VPS13BQ7Z7G8 4022 aa5.44□□□□□ -1.54
SNHG3-201ENST00000413987 ACYP2P14621 99 aa5.44□□□□□ -1.54
SNHG3-201ENST00000413987 MRPL34Q9BQ48 92 aaKnown RBP5.44□□□□□ -1.54
SNHG3-201ENST00000413987 A0A1B0GVY2 172 aa5.43□□□□□ -1.54
SNHG3-201ENST00000413987 Q96NJ1 140 aa5.43□□□□□ -1.54
SNHG3-201ENST00000413987 APOBP04114 4563 aaKnown RBP5.43□□□□□ -1.54
SNHG3-201ENST00000413987 FAT1Q14517 4588 aa5.41□□□□□ -1.54
SNHG3-201ENST00000413987 ZNF861PO60384 105 aa5.41□□□□□ -1.54
SNHG3-201ENST00000413987 SPATA8Q6RVD6 105 aa5.39□□□□□ -1.55
SNHG3-201ENST00000413987 Q6ZSA8 131 aa5.39□□□□□ -1.55
SNHG3-201ENST00000413987 A0A1B0GU69 56 aa5.38□□□□□ -1.55
SNHG3-201ENST00000413987 PSORS1C2Q9UIG4 136 aa5.38□□□□□ -1.55
SNHG3-201ENST00000413987 SMR3BP02814 79 aaPredicted RBP5.36□□□□□ -1.55
SNHG3-201ENST00000413987 KIAA1109Q2LD37 5005 aa5.35□□□□□ -1.55
SNHG3-201ENST00000413987 KRTAP13-1Q8IUC0 172 aa5.35□□□□□ -1.55
SNHG3-201ENST00000413987 UQCR11O14957 56 aa5.34□□□□□ -1.55
SNHG3-201ENST00000413987 HSPG2P98160 4391 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms