RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 A0A087WSZ3 146 aa8.37□□□□□ -1.07
MRPL55-220ENST00000411464 BAALC-AS2P0C853 105 aa8.37□□□□□ -1.07
MRPL55-220ENST00000411464 NDUFV3P56181 108 aaKnown RBP8.37□□□□□ -1.07
MRPL55-220ENST00000411464 C9JAW5 83 aa8.36□□□□□ -1.07
MRPL55-220ENST00000411464 H3BMG7 143 aa8.36□□□□□ -1.07
MRPL55-220ENST00000411464 TMEM256-PLSCR3K7ERE1 68 aa8.36□□□□□ -1.07
MRPL55-220ENST00000411464 MT1FP04733 61 aa8.36□□□□□ -1.07
MRPL55-220ENST00000411464 KRTAP10-10P60014 251 aa8.36□□□□□ -1.07
MRPL55-220ENST00000411464 K7EP34 96 aa8.35□□□□□ -1.07
MRPL55-220ENST00000411464 RBM12B-AS1Q9P1G2 102 aa8.35□□□□□ -1.07
MRPL55-220ENST00000411464 KRTAP16-1A8MUX0 517 aa8.33□□□□□ -1.08
MRPL55-220ENST00000411464 UBE2V1Q13404 147 aa8.33□□□□□ -1.08
MRPL55-220ENST00000411464 MTURNQ8N3F0 131 aa8.33□□□□□ -1.08
MRPL55-220ENST00000411464 KRTAP9-3Q9BYQ3 159 aa8.33□□□□□ -1.08
MRPL55-220ENST00000411464 A0A1B0GV72 72 aa8.32□□□□□ -1.08
MRPL55-220ENST00000411464 LINC00313P59037 77 aa8.32□□□□□ -1.08
MRPL55-220ENST00000411464 SIGMAR1Q99720 223 aa8.32□□□□□ -1.08
MRPL55-220ENST00000411464 ANKRD29Q8N6D5 301 aa8.31□□□□□ -1.08
MRPL55-220ENST00000411464 H3BT86 120 aa8.29□□□□□ -1.08
MRPL55-220ENST00000411464 GTF2H5Q6ZYL4 71 aa8.29□□□□□ -1.08
MRPL55-220ENST00000411464 MPLKIPQ8TAP9 179 aa8.28□□□□□ -1.08
MRPL55-220ENST00000411464 HRES1P13985 223 aa8.27□□□□□ -1.09
MRPL55-220ENST00000411464 LINC00846Q9NV44 126 aa8.27□□□□□ -1.09
MRPL55-220ENST00000411464 IGKV4-1P06312 121 aa8.26□□□□□ -1.09
MRPL55-220ENST00000411464 A0A1B0GV90 55 aa8.25□□□□□ -1.09
MRPL55-220ENST00000411464 PRO0461Q9UI25 63 aa8.25□□□□□ -1.09
MRPL55-220ENST00000411464 A0A1W2PNM2 257 aa8.24□□□□□ -1.09
MRPL55-220ENST00000411464 RBM3P98179 157 aaKnown RBP8.24□□□□□ -1.09
MRPL55-220ENST00000411464 JMJD7-PLA2G4BH0Y9G9 81 aa8.22□□□□□ -1.09
MRPL55-220ENST00000411464 NOTCH2NLQ7Z3S9 236 aa8.22□□□□□ -1.09
MRPL55-220ENST00000411464 TRBV7-4A0A0J9YYF1 115 aa8.21□□□□□ -1.1
MRPL55-220ENST00000411464 DSCR8Q96T75 97 aa8.2□□□□□ -1.1
MRPL55-220ENST00000411464 F8W1H4 67 aa8.18□□□□□ -1.1
MRPL55-220ENST00000411464 DEFB116Q30KQ4 102 aa8.18□□□□□ -1.1
MRPL55-220ENST00000411464 C14orf132Q9NPU4 83 aa8.18□□□□□ -1.1
MRPL55-220ENST00000411464 MACF1Q9UPN3 7388 aaKnown RBP8.18□□□□□ -1.1
MRPL55-220ENST00000411464 IGHV6-1A0A0B4J1U7 121 aa8.17□□□□□ -1.1
MRPL55-220ENST00000411464 CCKP06307 115 aa8.17□□□□□ -1.1
MRPL55-220ENST00000411464 LOC110117498A0A087WWA1 95 aa8.16□□□□□ -1.1
MRPL55-220ENST00000411464 VPS25Q9BRG1 176 aa8.16□□□□□ -1.1
MRPL55-220ENST00000411464 Q6ZQT0 140 aa8.15□□□□□ -1.1
MRPL55-220ENST00000411464 KRTAP19-6Q3LI70 58 aa8.14□□□□□ -1.11
MRPL55-220ENST00000411464 LINC00472Q9H8W2 130 aa8.14□□□□□ -1.11
MRPL55-220ENST00000411464 SYNE2Q8WXH0 6885 aaKnown RBP8.13□□□□□ -1.11
MRPL55-220ENST00000411464 PDE6GP18545 87 aa8.12□□□□□ -1.11
MRPL55-220ENST00000411464 ETDBQ3ZM63 59 aa8.11□□□□□ -1.11
MRPL55-220ENST00000411464 C8orf87E5RJ46 101 aa8.08□□□□□ -1.12
MRPL55-220ENST00000411464 SPINK7P58062 85 aa8.08□□□□□ -1.12
MRPL55-220ENST00000411464 C21orf62-AS1Q17RA5 79 aa8.07□□□□□ -1.12
MRPL55-220ENST00000411464 ZCCHC13Q8WW36 166 aaKnown RBP8.07□□□□□ -1.12
MRPL55-220ENST00000411464 A0A1B0GVX0 72 aa8.06□□□□□ -1.12
MRPL55-220ENST00000411464 A8MWP4 228 aa8.06□□□□□ -1.12
MRPL55-220ENST00000411464 A0A1B0GW54 56 aa8.03□□□□□ -1.12
MRPL55-220ENST00000411464 KRTAP6-3Q3LI67 103 aa8□□□□□ -1.13
MRPL55-220ENST00000411464 Q8N9P0 234 aaPredicted RBP7.99□□□□□ -1.13
MRPL55-220ENST00000411464 WFDC13Q8IUB5 93 aa7.98□□□□□ -1.13
MRPL55-220ENST00000411464 LOC100996750A0A140TA64 210 aa7.97□□□□□ -1.13
MRPL55-220ENST00000411464 J3KT08 172 aa7.97□□□□□ -1.13
MRPL55-220ENST00000411464 KRTAP4-6Q9BYQ5 205 aa7.97□□□□□ -1.13
MRPL55-220ENST00000411464 NREPQ16612 68 aa7.96□□□□□ -1.14
MRPL55-220ENST00000411464 NDUFB1O75438 58 aa7.93□□□□□ -1.14
MRPL55-220ENST00000411464 Q6ZVQ6 151 aa7.92□□□□□ -1.14
MRPL55-220ENST00000411464 UBL5Q9BZL1 73 aa7.89□□□□□ -1.15
MRPL55-220ENST00000411464 FAM240AA0A1B0GVK7 77 aa7.86□□□□□ -1.15
MRPL55-220ENST00000411464 ACYP1P07311 99 aa7.86□□□□□ -1.15
MRPL55-220ENST00000411464 C8orf17Q9NRJ1 99 aa7.86□□□□□ -1.15
MRPL55-220ENST00000411464 BPY2O14599 106 aa7.85□□□□□ -1.15
MRPL55-220ENST00000411464 H1FX-AS1Q4G0G2 97 aa7.84□□□□□ -1.15
MRPL55-220ENST00000411464 IGKV3D-7A0A0C4DH55 119 aa7.82□□□□□ -1.16
MRPL55-220ENST00000411464 J3QR89 54 aa7.81□□□□□ -1.16
MRPL55-220ENST00000411464 K7EQZ3 153 aa7.79□□□□□ -1.16
MRPL55-220ENST00000411464 PRR15Q8IV56 129 aa7.79□□□□□ -1.16
MRPL55-220ENST00000411464 Q8N9L7 120 aa7.78□□□□□ -1.16
MRPL55-220ENST00000411464 CXCL6P80162 114 aa7.75□□□□□ -1.17
MRPL55-220ENST00000411464 MMP24-AS1A0A0U1RRL7 71 aa7.73□□□□□ -1.17
MRPL55-220ENST00000411464 K7ERU9 68 aa7.72□□□□□ -1.17
MRPL55-220ENST00000411464 LINC00643Q86TS7 51 aa7.71□□□□□ -1.18
MRPL55-220ENST00000411464 MRPL34Q9BQ48 92 aaKnown RBP7.71□□□□□ -1.18
MRPL55-220ENST00000411464 ATP5EP2Q5VTU8 51 aa7.7□□□□□ -1.18
MRPL55-220ENST00000411464 TMEM254Q8TBM7 123 aa7.7□□□□□ -1.18
MRPL55-220ENST00000411464 A6NN06 94 aa7.68□□□□□ -1.18
MRPL55-220ENST00000411464 NDUFS5O43920 106 aa7.68□□□□□ -1.18
MRPL55-220ENST00000411464 hDV103S1A0JD37 113 aa7.67□□□□□ -1.18
MRPL55-220ENST00000411464 NEBP20929 6669 aa7.67□□□□□ -1.18
MRPL55-220ENST00000411464 IGKV2D-30A0A075B6S6 120 aa7.66□□□□□ -1.18
MRPL55-220ENST00000411464 IGKV2-30P06310 120 aa7.66□□□□□ -1.18
MRPL55-220ENST00000411464 CASC2Q6XLA1 102 aa7.65□□□□□ -1.18
MRPL55-220ENST00000411464 HCG22E2RYF7 251 aa7.64□□□□□ -1.19
MRPL55-220ENST00000411464 C7orf65Q6ZTY9 151 aa7.63□□□□□ -1.19
MRPL55-220ENST00000411464 HIST1H4AP62805 103 aaKnown RBP7.62□□□□□ -1.19
MRPL55-220ENST00000411464 FAM236AA0A1B0GUQ0 79 aa7.61□□□□□ -1.19
MRPL55-220ENST00000411464 FAM236BA0A1B0GV22 79 aa7.61□□□□□ -1.19
MRPL55-220ENST00000411464 KRTAP20-1Q3LI63 56 aa7.59□□□□□ -1.19
MRPL55-220ENST00000411464 Q5VV11 94 aa7.59□□□□□ -1.19
MRPL55-220ENST00000411464 MUC12Q9UKN1 5478 aa7.58□□□□□ -1.2
MRPL55-220ENST00000411464 A0A087WVE0 104 aa7.57□□□□□ -1.2
MRPL55-220ENST00000411464 C4orf26Q17RF5 130 aa7.57□□□□□ -1.2
MRPL55-220ENST00000411464 C5orf47Q569G3 176 aa7.57□□□□□ -1.2
MRPL55-220ENST00000411464 Q5W150 140 aa7.57□□□□□ -1.2
MRPL55-220ENST00000411464 MT1BP07438 61 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms