RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 EPRSP07814 1512 aaKnown RBP-2.14□□□□□ -2.75
RNU4-55P-201ENST00000410731 ZC3H13Q5T200 1668 aaKnown RBP-2.15□□□□□ -2.75
RNU4-55P-201ENST00000410731 TMEM131LA2VDJ0 1609 aa-2.15□□□□□ -2.75
RNU4-55P-201ENST00000410731 MT-ATP8P03928 68 aa-2.15□□□□□ -2.75
RNU4-55P-201ENST00000410731 GTF2H5Q6ZYL4 71 aa-2.15□□□□□ -2.75
RNU4-55P-201ENST00000410731 TMEM203Q969S6 136 aa-2.15□□□□□ -2.75
RNU4-55P-201ENST00000410731 ATP10BO94823 1461 aa-2.15□□□□□ -2.75
RNU4-55P-201ENST00000410731 DEFB131BA0A096LNP1 70 aa-2.16□□□□□ -2.76
RNU4-55P-201ENST00000410731 H3BUA1 57 aa-2.16□□□□□ -2.76
RNU4-55P-201ENST00000410731 FAUP35544 74 aaKnown RBP-2.16□□□□□ -2.76
RNU4-55P-201ENST00000410731 IFI27P40305 119 aaPredicted RBP-2.16□□□□□ -2.76
RNU4-55P-201ENST00000410731 FANCAO15360 1455 aa-2.16□□□□□ -2.76
RNU4-55P-201ENST00000410731 NCOA2Q15596 1464 aa-2.16□□□□□ -2.76
RNU4-55P-201ENST00000410731 ARFGEF2Q9Y6D5 1785 aa-2.17□□□□□ -2.76
RNU4-55P-201ENST00000410731 PLCH1Q4KWH8 1693 aa-2.17□□□□□ -2.76
RNU4-55P-201ENST00000410731 M0QZ58 72 aa-2.17□□□□□ -2.76
RNU4-55P-201ENST00000410731 NDUFA4O00483 81 aa-2.17□□□□□ -2.76
RNU4-55P-201ENST00000410731 A0A1B0GUL6 1792 aa-2.18□□□□□ -2.76
RNU4-55P-201ENST00000410731 SPART-AS1P0CW21 52 aa-2.18□□□□□ -2.76
RNU4-55P-201ENST00000410731 MRPS10P82664 201 aaKnown RBP-2.18□□□□□ -2.76
RNU4-55P-201ENST00000410731 ACBD7Q8N6N7 88 aa-2.18□□□□□ -2.76
RNU4-55P-201ENST00000410731 LRRIQ1Q96JM4 1722 aa-2.18□□□□□ -2.76
RNU4-55P-201ENST00000410731 NEXMIFQ5QGS0 1516 aa-2.18□□□□□ -2.76
RNU4-55P-201ENST00000410731 M0QY20 66 aa-2.19□□□□□ -2.76
RNU4-55P-201ENST00000410731 DLEU1O43261 78 aa-2.19□□□□□ -2.76
RNU4-55P-201ENST00000410731 SMIM11AP58511 58 aa-2.19□□□□□ -2.76
RNU4-55P-201ENST00000410731 SARNPP82979 210 aaKnown RBP-2.19□□□□□ -2.76
RNU4-55P-201ENST00000410731 PCNTO95613 3336 aa-2.19□□□□□ -2.76
RNU4-55P-201ENST00000410731 CCDC88BA6NC98 1476 aa-2.2□□□□□ -2.76
RNU4-55P-201ENST00000410731 A0A1B0GV90 55 aa-2.2□□□□□ -2.76
RNU4-55P-201ENST00000410731 UMAD1C9J7I0 102 aa-2.2□□□□□ -2.76
RNU4-55P-201ENST00000410731 MRPL33O75394 65 aaKnown RBP-2.2□□□□□ -2.76
RNU4-55P-201ENST00000410731 MT1FP04733 61 aa-2.2□□□□□ -2.76
RNU4-55P-201ENST00000410731 RPS29P62273 56 aaKnown RBP-2.2□□□□□ -2.76
RNU4-55P-201ENST00000410731 PEA15Q15121 130 aa-2.2□□□□□ -2.76
RNU4-55P-201ENST00000410731 MINOS1Q5TGZ0 78 aa-2.2□□□□□ -2.76
RNU4-55P-201ENST00000410731 UBR1Q8IWV7 1749 aa-2.2□□□□□ -2.76
RNU4-55P-201ENST00000410731 A8MTW9 85 aa-2.21□□□□□ -2.76
RNU4-55P-201ENST00000410731 C20orf78Q9BR46 151 aa-2.21□□□□□ -2.76
RNU4-55P-201ENST00000410731 MYO3AQ8NEV4 1616 aa-2.21□□□□□ -2.76
RNU4-55P-201ENST00000410731 URB2Q14146 1524 aaKnown RBP-2.22□□□□□ -2.76
RNU4-55P-201ENST00000410731 MYMXA0A1B0GTQ4 84 aa-2.22□□□□□ -2.76
RNU4-55P-201ENST00000410731 FAM107BQ9H098 131 aa-2.22□□□□□ -2.76
RNU4-55P-201ENST00000410731 ERVK-7P63135 1459 aa-2.22□□□□□ -2.77
RNU4-55P-201ENST00000410731 ZFYVE16Q7Z3T8 1539 aa-2.22□□□□□ -2.77
RNU4-55P-201ENST00000410731 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.22□□□□□ -2.77
RNU4-55P-201ENST00000410731 TJP1Q07157 1748 aa-2.22□□□□□ -2.77
RNU4-55P-201ENST00000410731 SFTA3P0C7M3 94 aa-2.23□□□□□ -2.77
RNU4-55P-201ENST00000410731 LINC00032P0C843 101 aa-2.23□□□□□ -2.77
RNU4-55P-201ENST00000410731 NCBP2-AS2Q69YL0 99 aa-2.23□□□□□ -2.77
RNU4-55P-201ENST00000410731 GNG8Q9UK08 70 aa-2.23□□□□□ -2.77
RNU4-55P-201ENST00000410731 NRAPQ86VF7 1730 aa-2.23□□□□□ -2.77
RNU4-55P-201ENST00000410731 CRIP1P50238 77 aa-2.24□□□□□ -2.77
RNU4-55P-201ENST00000410731 FRYLO94915 3013 aa-2.25□□□□□ -2.77
RNU4-55P-201ENST00000410731 CEBPZOSA8MTT3 80 aa-2.25□□□□□ -2.77
RNU4-55P-201ENST00000410731 FCER1GP30273 86 aa-2.25□□□□□ -2.77
RNU4-55P-201ENST00000410731 DPY30Q9C005 99 aa-2.25□□□□□ -2.77
RNU4-55P-201ENST00000410731 C6orf48Q9UBA6 75 aa-2.25□□□□□ -2.77
RNU4-55P-201ENST00000410731 DNMBPQ6XZF7 1577 aa-2.25□□□□□ -2.77
RNU4-55P-201ENST00000410731 RNF17Q9BXT8 1623 aaKnown RBP-2.26□□□□□ -2.77
RNU4-55P-201ENST00000410731 CENPEQ02224 2701 aa-2.26□□□□□ -2.77
RNU4-55P-201ENST00000410731 DEFB136Q30KP8 78 aa-2.26□□□□□ -2.77
RNU4-55P-201ENST00000410731 PPLO60437 1756 aa-2.26□□□□□ -2.77
RNU4-55P-201ENST00000410731 SZT2Q5T011 3432 aa-2.26□□□□□ -2.77
RNU4-55P-201ENST00000410731 CEP350Q5VT06 3117 aa-2.26□□□□□ -2.77
RNU4-55P-201ENST00000410731 CD163L1Q9NR16 1453 aa-2.26□□□□□ -2.77
RNU4-55P-201ENST00000410731 RICTORQ6R327 1708 aa-2.27□□□□□ -2.77
RNU4-55P-201ENST00000410731 S100A10P60903 97 aa-2.27□□□□□ -2.77
RNU4-55P-201ENST00000410731 NREPQ16612 68 aa-2.27□□□□□ -2.77
RNU4-55P-201ENST00000410731 RABAC1Q9UI14 185 aa-2.27□□□□□ -2.77
RNU4-55P-201ENST00000410731 INO80Q9ULG1 1556 aaPredicted RBP-2.27□□□□□ -2.77
RNU4-55P-201ENST00000410731 C20orf202A1L168 122 aa-2.28□□□□□ -2.77
RNU4-55P-201ENST00000410731 KCNQ1DNQ9H478 68 aa-2.28□□□□□ -2.77
RNU4-55P-201ENST00000410731 HFM1A2PYH4 1435 aa-2.28□□□□□ -2.77
RNU4-55P-201ENST00000410731 MED14O60244 1454 aa-2.28□□□□□ -2.77
RNU4-55P-201ENST00000410731 ARHGAP35Q9NRY4 1499 aa-2.28□□□□□ -2.77
RNU4-55P-201ENST00000410731 PIK3C2BO00750 1634 aa-2.28□□□□□ -2.77
RNU4-55P-201ENST00000410731 MAP3K4Q9Y6R4 1608 aa-2.28□□□□□ -2.77
RNU4-55P-201ENST00000410731 S100A12P80511 92 aa-2.29□□□□□ -2.78
RNU4-55P-201ENST00000410731 UBL5Q9BZL1 73 aa-2.29□□□□□ -2.78
RNU4-55P-201ENST00000410731 HMGN1P05114 100 aa-2.3□□□□□ -2.78
RNU4-55P-201ENST00000410731 LEAP2Q969E1 77 aa-2.3□□□□□ -2.78
RNU4-55P-201ENST00000410731 CFAP43Q8NDM7 1665 aa-2.31□□□□□ -2.78
RNU4-55P-201ENST00000410731 HMGA1P17096 107 aaKnown RBP-2.31□□□□□ -2.78
RNU4-55P-201ENST00000410731 CEP162Q5TB80 1403 aa-2.32□□□□□ -2.78
RNU4-55P-201ENST00000410731 C2orf88Q9BSF0 95 aa-2.32□□□□□ -2.78
RNU4-55P-201ENST00000410731 GYPAP02724 150 aa-2.33□□□□□ -2.78
RNU4-55P-201ENST00000410731 LINC00643Q86TS7 51 aa-2.33□□□□□ -2.78
RNU4-55P-201ENST00000410731 RBP2P50120 134 aa-2.34□□□□□ -2.78
RNU4-55P-201ENST00000410731 SNRPFP62306 86 aaKnown RBP-2.34□□□□□ -2.78
RNU4-55P-201ENST00000410731 RALGAPBQ86X10 1494 aa-2.34□□□□□ -2.78
RNU4-55P-201ENST00000410731 MYO5CQ9NQX4 1742 aa-2.34□□□□□ -2.78
RNU4-55P-201ENST00000410731 AKAP12Q02952 1782 aa-2.35□□□□□ -2.79
RNU4-55P-201ENST00000410731 PVALEFA0A1B0GWK0 134 aa-2.35□□□□□ -2.79
RNU4-55P-201ENST00000410731 NHSQ6T4R5 1651 aa-2.36□□□□□ -2.79
RNU4-55P-201ENST00000410731 ETDCA0A1B0GVM5 59 aa-2.36□□□□□ -2.79
RNU4-55P-201ENST00000410731 EFCAB10A6NFE3 127 aa-2.36□□□□□ -2.79
RNU4-55P-201ENST00000410731 KIF21BO75037 1637 aa-2.36□□□□□ -2.79
RNU4-55P-201ENST00000410731 KIF14Q15058 1648 aa-2.36□□□□□ -2.79
RNU4-55P-201ENST00000410731 DNAH14Q0VDD8 3507 aa-2.37□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms