RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 ENHOQ6UWT2 76 aa-1.02□□□□□ -2.57
RNU2-28P-201ENST00000410457 DEFB106AQ8N104 65 aa-1.02□□□□□ -2.57
RNU2-28P-201ENST00000410457 UBR4Q5T4S7 5183 aa-1.03□□□□□ -2.57
RNU2-28P-201ENST00000410457 INO80Q9ULG1 1556 aaPredicted RBP-1.03□□□□□ -2.57
RNU2-28P-201ENST00000410457 WDR87Q6ZQQ6 2873 aa-1.03□□□□□ -2.57
RNU2-28P-201ENST00000410457 MT4P47944 62 aa-1.03□□□□□ -2.57
RNU2-28P-201ENST00000410457 DOPEY1Q5JWR5 2465 aa-1.03□□□□□ -2.57
RNU2-28P-201ENST00000410457 MUC17Q685J3 4493 aa-1.03□□□□□ -2.57
RNU2-28P-201ENST00000410457 RYR3Q15413 4870 aa-1.04□□□□□ -2.58
RNU2-28P-201ENST00000410457 DNAH11Q96DT5 4516 aa-1.04□□□□□ -2.58
RNU2-28P-201ENST00000410457 APOBP04114 4563 aaKnown RBP-1.05□□□□□ -2.58
RNU2-28P-201ENST00000410457 RIF1Q5UIP0 2472 aaKnown RBP-1.05□□□□□ -2.58
RNU2-28P-201ENST00000410457 USH2AO75445 5202 aa-1.06□□□□□ -2.58
RNU2-28P-201ENST00000410457 H3BVH4 76 aa-1.06□□□□□ -2.58
RNU2-28P-201ENST00000410457 ETDCA0A1B0GVM5 59 aa-1.07□□□□□ -2.58
RNU2-28P-201ENST00000410457 NRAPQ86VF7 1730 aa-1.07□□□□□ -2.58
RNU2-28P-201ENST00000410457 PARP4Q9UKK3 1724 aaKnown RBP-1.07□□□□□ -2.58
RNU2-28P-201ENST00000410457 NHSQ6T4R5 1651 aa-1.07□□□□□ -2.58
RNU2-28P-201ENST00000410457 ANKRD36CQ5JPF3 1778 aa-1.08□□□□□ -2.58
RNU2-28P-201ENST00000410457 LRRIQ1Q96JM4 1722 aa-1.08□□□□□ -2.58
RNU2-28P-201ENST00000410457 ITSN2Q9NZM3 1697 aa-1.08□□□□□ -2.58
RNU2-28P-201ENST00000410457 WT1-ASQ06250 92 aa-1.09□□□□□ -2.58
RNU2-28P-201ENST00000410457 RANBP2P49792 3224 aaKnown RBP-1.1□□□□□ -2.58
RNU2-28P-201ENST00000410457 HYDINQ4G0P3 5121 aa-1.1□□□□□ -2.59
RNU2-28P-201ENST00000410457 DIP2AQ14689 1571 aa-1.11□□□□□ -2.59
RNU2-28P-201ENST00000410457 DEFB114Q30KQ6 69 aa-1.12□□□□□ -2.59
RNU2-28P-201ENST00000410457 DEFB110Q30KQ9 67 aa-1.12□□□□□ -2.59
RNU2-28P-201ENST00000410457 RYR1P21817 5038 aa-1.13□□□□□ -2.59
RNU2-28P-201ENST00000410457 KIAA1109Q2LD37 5005 aa-1.13□□□□□ -2.59
RNU2-28P-201ENST00000410457 MINOS1Q5TGZ0 78 aa-1.13□□□□□ -2.59
RNU2-28P-201ENST00000410457 RPS27P42677 84 aaKnown RBP-1.14□□□□□ -2.59
RNU2-28P-201ENST00000410457 RPS27LQ71UM5 84 aaKnown RBP-1.14□□□□□ -2.59
RNU2-28P-201ENST00000410457 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.14□□□□□ -2.59
RNU2-28P-201ENST00000410457 MYO5CQ9NQX4 1742 aa-1.15□□□□□ -2.59
RNU2-28P-201ENST00000410457 TOGARAM1Q9Y4F4 1720 aa-1.15□□□□□ -2.59
RNU2-28P-201ENST00000410457 KIF1AQ12756 1690 aa-1.15□□□□□ -2.59
RNU2-28P-201ENST00000410457 CDC42BPGQ6DT37 1551 aa-1.15□□□□□ -2.59
RNU2-28P-201ENST00000410457 ATXN8Q156A1 80 aa-1.15□□□□□ -2.59
RNU2-28P-201ENST00000410457 TLN2Q9Y4G6 2542 aa-1.15□□□□□ -2.59
RNU2-28P-201ENST00000410457 A0A0C4DFX4 3053 aa-1.15□□□□□ -2.59
RNU2-28P-201ENST00000410457 TRIOO75962 3097 aa-1.16□□□□□ -2.59
RNU2-28P-201ENST00000410457 SCRIBQ14160 1630 aa-1.16□□□□□ -2.6
RNU2-28P-201ENST00000410457 DNAH1Q9P2D7 4330 aa-1.16□□□□□ -2.6
RNU2-28P-201ENST00000410457 RELNP78509 3460 aa-1.16□□□□□ -2.6
RNU2-28P-201ENST00000410457 USP9XQ93008 2570 aaPredicted RBP-1.16□□□□□ -2.6
RNU2-28P-201ENST00000410457 SACSQ9NZJ4 4579 aa-1.18□□□□□ -2.6
RNU2-28P-201ENST00000410457 IQGAP3Q86VI3 1631 aa-1.19□□□□□ -2.6
RNU2-28P-201ENST00000410457 C3P01024 1663 aa-1.2□□□□□ -2.6
RNU2-28P-201ENST00000410457 TEX15Q9BXT5 2789 aa-1.2□□□□□ -2.6
RNU2-28P-201ENST00000410457 UGGT2Q9NYU1 1516 aa-1.2□□□□□ -2.6
RNU2-28P-201ENST00000410457 IGLV5-48A0A075B6I7 105 aa-1.21□□□□□ -2.6
RNU2-28P-201ENST00000410457 C6orf48Q9UBA6 75 aa-1.21□□□□□ -2.6
RNU2-28P-201ENST00000410457 HILPDAQ9Y5L2 63 aa-1.21□□□□□ -2.6
RNU2-28P-201ENST00000410457 ABCC6O95255 1503 aa-1.21□□□□□ -2.6
RNU2-28P-201ENST00000410457 EPPK1P58107 5090 aaKnown RBP-1.22□□□□□ -2.6
RNU2-28P-201ENST00000410457 DUOX2Q9NRD8 1548 aa-1.22□□□□□ -2.6
RNU2-28P-201ENST00000410457 H3BUA1 57 aa-1.23□□□□□ -2.61
RNU2-28P-201ENST00000410457 SMCO4Q9NRQ5 59 aa-1.23□□□□□ -2.61
RNU2-28P-201ENST00000410457 DNMBPQ6XZF7 1577 aa-1.23□□□□□ -2.61
RNU2-28P-201ENST00000410457 FRYQ5TBA9 3013 aa-1.23□□□□□ -2.61
RNU2-28P-201ENST00000410457 ABCA9Q8IUA7 1624 aa-1.25□□□□□ -2.61
RNU2-28P-201ENST00000410457 MMP24-AS1A0A0U1RRL7 71 aa-1.25□□□□□ -2.61
RNU2-28P-201ENST00000410457 MT1HP80294 61 aa-1.25□□□□□ -2.61
RNU2-28P-201ENST00000410457 KRTAP19-5Q3LI72 72 aa-1.25□□□□□ -2.61
RNU2-28P-201ENST00000410457 DNAH2Q9P225 4427 aa-1.25□□□□□ -2.61
RNU2-28P-201ENST00000410457 PDCD5O14737 125 aa-1.26□□□□□ -2.61
RNU2-28P-201ENST00000410457 GNG13Q9P2W3 67 aa-1.26□□□□□ -2.61
RNU2-28P-201ENST00000410457 ASXL1Q8IXJ9 1541 aa-1.26□□□□□ -2.61
RNU2-28P-201ENST00000410457 COL12A1Q99715 3063 aa-1.26□□□□□ -2.61
RNU2-28P-201ENST00000410457 MROH1Q8NDA8 1641 aa-1.28□□□□□ -2.61
RNU2-28P-201ENST00000410457 FCER1GP30273 86 aa-1.28□□□□□ -2.61
RNU2-28P-201ENST00000410457 NCBP2-AS2Q69YL0 99 aa-1.28□□□□□ -2.61
RNU2-28P-201ENST00000410457 DNAH8Q96JB1 4490 aa-1.29□□□□□ -2.62
RNU2-28P-201ENST00000410457 SPENQ96T58 3664 aaKnown RBP-1.3□□□□□ -2.62
RNU2-28P-201ENST00000410457 TNP1P09430 55 aa-1.3□□□□□ -2.62
RNU2-28P-201ENST00000410457 CLASP1Q7Z460 1538 aa-1.3□□□□□ -2.62
RNU2-28P-201ENST00000410457 C5orf42Q9H799 3197 aa-1.31□□□□□ -2.62
RNU2-28P-201ENST00000410457 LY75O60449 1722 aa-1.31□□□□□ -2.62
RNU2-28P-201ENST00000410457 NOP10Q9NPE3 64 aaKnown RBP-1.31□□□□□ -2.62
RNU2-28P-201ENST00000410457 BIRC6Q9NR09 4857 aa-1.31□□□□□ -2.62
RNU2-28P-201ENST00000410457 SPTBN5Q9NRC6 3674 aaKnown RBP-1.31□□□□□ -2.62
RNU2-28P-201ENST00000410457 LAMA3Q16787 3333 aa-1.32□□□□□ -2.62
RNU2-28P-201ENST00000410457 DEFB1P60022 68 aa-1.32□□□□□ -2.62
RNU2-28P-201ENST00000410457 RNF213Q63HN8 5207 aa-1.32□□□□□ -2.62
RNU2-28P-201ENST00000410457 SFTA3P0C7M3 94 aa-1.33□□□□□ -2.62
RNU2-28P-201ENST00000410457 K7EMI3 77 aa-1.34□□□□□ -2.62
RNU2-28P-201ENST00000410457 LAMA2P24043 3122 aaKnown RBP-1.34□□□□□ -2.62
RNU2-28P-201ENST00000410457 ITPR1Q14643 2758 aa-1.35□□□□□ -2.62
RNU2-28P-201ENST00000410457 MADDQ8WXG6 1647 aa-1.36□□□□□ -2.63
RNU2-28P-201ENST00000410457 RYR2Q92736 4967 aa-1.37□□□□□ -2.63
RNU2-28P-201ENST00000410457 LINC01549A6NIU2 74 aa-1.37□□□□□ -2.63
RNU2-28P-201ENST00000410457 CLPSL2Q6UWE3 100 aa-1.37□□□□□ -2.63
RNU2-28P-201ENST00000410457 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.37□□□□□ -2.63
RNU2-28P-201ENST00000410457 PLECQ15149 4684 aaKnown RBP-1.39□□□□□ -2.63
RNU2-28P-201ENST00000410457 SPTAN1Q13813 2472 aaKnown RBP-1.39□□□□□ -2.63
RNU2-28P-201ENST00000410457 CELSR3Q9NYQ7 3312 aa-1.39□□□□□ -2.63
RNU2-28P-201ENST00000410457 NIPBLQ6KC79 2804 aaeCLIP-1.39□□□□□ -2.63
RNU2-28P-201ENST00000410457 CDC42BPAQ5VT25 1732 aa-1.4□□□□□ -2.63
RNU2-28P-201ENST00000410457 TIAM1Q13009 1591 aa-1.41□□□□□ -2.63
RNU2-28P-201ENST00000410457 SMR3BP02814 79 aaPredicted RBP-1.41□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms