RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 C1orf195Q5TG92 126 aa11.89□□□□□ -0.51
LIMS2-207ENST00000409808 Q96NJ1 140 aa11.89□□□□□ -0.51
LIMS2-207ENST00000409808 IGLV9-49A0A0B4J1Y8 123 aa11.88□□□□□ -0.51
LIMS2-207ENST00000409808 RYR2Q92736 4967 aa11.88□□□□□ -0.51
LIMS2-207ENST00000409808 Q6ZSA8 131 aa11.85□□□□□ -0.51
LIMS2-207ENST00000409808 LRP1BQ9NZR2 4599 aa11.84□□□□□ -0.51
LIMS2-207ENST00000409808 C8orf17Q9NRJ1 99 aa11.82□□□□□ -0.52
LIMS2-207ENST00000409808 IGLV7-46A0A075B6I9 117 aa11.8□□□□□ -0.52
LIMS2-207ENST00000409808 SEC61GP60059 68 aa11.8□□□□□ -0.52
LIMS2-207ENST00000409808 A0A1B0GVX0 72 aa11.78□□□□□ -0.52
LIMS2-207ENST00000409808 ZNF861PO60384 105 aa11.78□□□□□ -0.52
LIMS2-207ENST00000409808 CDK2AP2O75956 126 aa11.78□□□□□ -0.52
LIMS2-207ENST00000409808 PSPHP1O15172 72 aa11.76□□□□□ -0.53
LIMS2-207ENST00000409808 LIMD2Q9BT23 127 aa11.76□□□□□ -0.53
LIMS2-207ENST00000409808 A0A1B0GVY2 172 aa11.75□□□□□ -0.53
LIMS2-207ENST00000409808 DYNC1H1Q14204 4646 aaKnown RBP11.75□□□□□ -0.53
LIMS2-207ENST00000409808 IGLV7-43P04211 117 aa11.74□□□□□ -0.53
LIMS2-207ENST00000409808 IGHV6-1A0A0B4J1U7 121 aa11.72□□□□□ -0.53
LIMS2-207ENST00000409808 ANAPC11Q9NYG5 84 aa11.72□□□□□ -0.53
LIMS2-207ENST00000409808 Q8N9P0 234 aaPredicted RBP11.71□□□□□ -0.53
LIMS2-207ENST00000409808 MRPL34Q9BQ48 92 aaKnown RBP11.71□□□□□ -0.53
LIMS2-207ENST00000409808 A8MUN3 132 aa11.69□□□□□ -0.54
LIMS2-207ENST00000409808 COA5Q86WW8 74 aa11.68□□□□□ -0.54
LIMS2-207ENST00000409808 VPS13BQ7Z7G8 4022 aa11.67□□□□□ -0.54
LIMS2-207ENST00000409808 NDUFS5O43920 106 aa11.66□□□□□ -0.54
LIMS2-207ENST00000409808 Q5VV11 94 aa11.65□□□□□ -0.54
LIMS2-207ENST00000409808 CD164Q04900 197 aa11.65□□□□□ -0.54
LIMS2-207ENST00000409808 PCOTHQ58A44 107 aa11.65□□□□□ -0.54
LIMS2-207ENST00000409808 RYR3Q15413 4870 aa11.64□□□□□ -0.55
LIMS2-207ENST00000409808 APOBP04114 4563 aaKnown RBP11.6□□□□□ -0.55
LIMS2-207ENST00000409808 LOC101927531A0A1B0GV80 90 aa11.58□□□□□ -0.56
LIMS2-207ENST00000409808 SMR3BP02814 79 aaPredicted RBP11.58□□□□□ -0.56
LIMS2-207ENST00000409808 SSBP3-AS1Q7Z2R9 100 aa11.58□□□□□ -0.56
LIMS2-207ENST00000409808 PRR15LQ9BU68 103 aa11.57□□□□□ -0.56
LIMS2-207ENST00000409808 PMAIP1Q13794 54 aa11.57□□□□□ -0.56
LIMS2-207ENST00000409808 A0A087X002 238 aa11.55□□□□□ -0.56
LIMS2-207ENST00000409808 CHKB-CPT1BH3BT56 60 aa11.55□□□□□ -0.56
LIMS2-207ENST00000409808 NOTCH2NLQ7Z3S9 236 aa11.55□□□□□ -0.56
LIMS2-207ENST00000409808 Q75L30 129 aa11.54□□□□□ -0.56
LIMS2-207ENST00000409808 C8orf87E5RJ46 101 aa11.54□□□□□ -0.56
LIMS2-207ENST00000409808 FAT1Q14517 4588 aa11.52□□□□□ -0.56
LIMS2-207ENST00000409808 LINC01558Q9Y6Z2 57 aa11.51□□□□□ -0.57
LIMS2-207ENST00000409808 SPINK6Q6UWN8 80 aa11.5□□□□□ -0.57
LIMS2-207ENST00000409808 HRES1P13985 223 aa11.48□□□□□ -0.57
LIMS2-207ENST00000409808 KRTAP13-3Q3SY46 172 aa11.48□□□□□ -0.57
LIMS2-207ENST00000409808 A8MU10 97 aa11.45□□□□□ -0.58
LIMS2-207ENST00000409808 Q5W150 140 aa11.44□□□□□ -0.58
LIMS2-207ENST00000409808 KRTAP1-4P0C5Y4 121 aa11.43□□□□□ -0.58
LIMS2-207ENST00000409808 KRTAP13-2Q52LG2 175 aa11.41□□□□□ -0.58
LIMS2-207ENST00000409808 SPAG11AQ6PDA7 123 aa11.41□□□□□ -0.58
LIMS2-207ENST00000409808 A6NED7 52 aa11.4□□□□□ -0.59
LIMS2-207ENST00000409808 LINC00313P59037 77 aa11.38□□□□□ -0.59
LIMS2-207ENST00000409808 KRTAP10-4P60372 401 aaPredicted RBP11.37□□□□□ -0.59
LIMS2-207ENST00000409808 ATP11AUNQ6ZP68 121 aa11.36□□□□□ -0.59
LIMS2-207ENST00000409808 FAM229AH3BQW9 127 aa11.36□□□□□ -0.59
LIMS2-207ENST00000409808 PLA2G1BP04054 148 aaKnown RBP11.36□□□□□ -0.59
LIMS2-207ENST00000409808 ACYP2P14621 99 aa11.36□□□□□ -0.59
LIMS2-207ENST00000409808 LCA10Q71F78 164 aa11.34□□□□□ -0.59
LIMS2-207ENST00000409808 CDC42SE1Q9NRR8 79 aa11.34□□□□□ -0.59
LIMS2-207ENST00000409808 HSPG2P98160 4391 aa11.32□□□□□ -0.6
LIMS2-207ENST00000409808 DMAC1Q96GE9 116 aa11.27□□□□□ -0.6
LIMS2-207ENST00000409808 PRR26Q8N8Z3 221 aa11.26□□□□□ -0.61
LIMS2-207ENST00000409808 IGKV2-30P06310 120 aa11.24□□□□□ -0.61
LIMS2-207ENST00000409808 SPTSSBQ8NFR3 76 aa11.24□□□□□ -0.61
LIMS2-207ENST00000409808 TYMSOSQ8TAI1 123 aa11.24□□□□□ -0.61
LIMS2-207ENST00000409808 EPPK1P58107 5090 aaKnown RBP11.23□□□□□ -0.61
LIMS2-207ENST00000409808 KRTAP17-1Q9BYP8 105 aa11.2□□□□□ -0.62
LIMS2-207ENST00000409808 KRTAP16-1A8MUX0 517 aa11.2□□□□□ -0.62
LIMS2-207ENST00000409808 RYR1P21817 5038 aa11.19□□□□□ -0.62
LIMS2-207ENST00000409808 SPINK7P58062 85 aa11.18□□□□□ -0.62
LIMS2-207ENST00000409808 Q5VSD8 79 aa11.17□□□□□ -0.62
LIMS2-207ENST00000409808 KIAA1109Q2LD37 5005 aa11.17□□□□□ -0.62
LIMS2-207ENST00000409808 KTN1-AS1Q86SY8 53 aa11.17□□□□□ -0.62
LIMS2-207ENST00000409808 PKHD1L1Q86WI1 4243 aa11.16□□□□□ -0.62
LIMS2-207ENST00000409808 A6NN06 94 aa11.14□□□□□ -0.63
LIMS2-207ENST00000409808 C4orf48Q5BLP8 95 aa11.13□□□□□ -0.63
LIMS2-207ENST00000409808 RBM12B-AS1Q9P1G2 102 aa11.13□□□□□ -0.63
LIMS2-207ENST00000409808 RETNLBQ9BQ08 111 aa11.12□□□□□ -0.63
LIMS2-207ENST00000409808 SPINK1P00995 79 aa11.09□□□□□ -0.63
LIMS2-207ENST00000409808 LRP1Q07954 4544 aaKnown RBP11.09□□□□□ -0.63
LIMS2-207ENST00000409808 LINC00304Q8N9R0 145 aa11.08□□□□□ -0.64
LIMS2-207ENST00000409808 A0A1B0GU69 56 aa11.03□□□□□ -0.64
LIMS2-207ENST00000409808 IGKV2D-30A0A075B6S6 120 aa11.01□□□□□ -0.65
LIMS2-207ENST00000409808 RPS29P62273 56 aaKnown RBP11□□□□□ -0.65
LIMS2-207ENST00000409808 FLG2Q5D862 2391 aaPredicted RBP10.99□□□□□ -0.65
LIMS2-207ENST00000409808 TNXBP22105 4242 aa10.97□□□□□ -0.65
LIMS2-207ENST00000409808 C7orf65Q6ZTY9 151 aa10.96□□□□□ -0.65
LIMS2-207ENST00000409808 Q8N1X5 172 aa10.96□□□□□ -0.65
LIMS2-207ENST00000409808 FAT3Q8TDW7 4589 aa10.94□□□□□ -0.66
LIMS2-207ENST00000409808 SPATA8Q6RVD6 105 aa10.92□□□□□ -0.66
LIMS2-207ENST00000409808 MYCBP2O75592 4640 aa10.91□□□□□ -0.66
LIMS2-207ENST00000409808 KRTAP10-8P60410 259 aa10.9□□□□□ -0.67
LIMS2-207ENST00000409808 UQCR11O14957 56 aa10.87□□□□□ -0.67
LIMS2-207ENST00000409808 KRTAP4-5Q9BYR2 181 aa10.84□□□□□ -0.67
LIMS2-207ENST00000409808 MIR22HGQ0VDD5 57 aa10.83□□□□□ -0.68
LIMS2-207ENST00000409808 DMBT1Q9UGM3 2413 aaPredicted RBP10.8□□□□□ -0.68
LIMS2-207ENST00000409808 MT1HL1P0DM35 61 aa10.76□□□□□ -0.69
LIMS2-207ENST00000409808 C9orf92A6NGG3 77 aa10.73□□□□□ -0.69
LIMS2-207ENST00000409808 A8MUU9 505 aa10.73□□□□□ -0.69
LIMS2-207ENST00000409808 C20orf166-AS1Q96NR2 134 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms