RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 REG3AQ06141 175 aa3.49□□□□□ -1.85
CLK1-202ENST00000409403 LINC01558Q9Y6Z2 57 aa3.49□□□□□ -1.85
CLK1-202ENST00000409403 DYNC1H1Q14204 4646 aaKnown RBP3.48□□□□□ -1.85
CLK1-202ENST00000409403 B4DSR2 109 aa3.48□□□□□ -1.85
CLK1-202ENST00000409403 ANGP03950 147 aaKnown RBP3.48□□□□□ -1.85
CLK1-202ENST00000409403 PRR4Q16378 134 aa3.48□□□□□ -1.85
CLK1-202ENST00000409403 PRO0255Q9UI72 69 aa3.48□□□□□ -1.85
CLK1-202ENST00000409403 H0Y9P7 68 aa3.47□□□□□ -1.85
CLK1-202ENST00000409403 KRTAP10-7P60409 375 aaPredicted RBP3.47□□□□□ -1.85
CLK1-202ENST00000409403 EGFEM1PQ0D2K5 195 aa3.47□□□□□ -1.85
CLK1-202ENST00000409403 MOBPQ13875 183 aa3.47□□□□□ -1.85
CLK1-202ENST00000409403 C1orf137Q5JT78 98 aa3.47□□□□□ -1.85
CLK1-202ENST00000409403 CLPSL2Q6UWE3 100 aa3.47□□□□□ -1.85
CLK1-202ENST00000409403 UNQ6190/PRO20217Q6UXQ8 127 aa3.47□□□□□ -1.85
CLK1-202ENST00000409403 COA5Q86WW8 74 aa3.47□□□□□ -1.85
CLK1-202ENST00000409403 ST20-AS1Q8NBB2 130 aa3.47□□□□□ -1.85
CLK1-202ENST00000409403 HMCN2Q8NDA2 5059 aa3.47□□□□□ -1.85
CLK1-202ENST00000409403 K7EQZ3 153 aa3.46□□□□□ -1.85
CLK1-202ENST00000409403 DSCR10P59022 87 aa3.46□□□□□ -1.85
CLK1-202ENST00000409403 A8MU10 97 aa3.46□□□□□ -1.86
CLK1-202ENST00000409403 LINC01554Q52M75 96 aa3.46□□□□□ -1.86
CLK1-202ENST00000409403 C10orf99Q6UWK7 81 aa3.46□□□□□ -1.86
CLK1-202ENST00000409403 ZNF702PQ9H963 129 aa3.46□□□□□ -1.86
CLK1-202ENST00000409403 IGKV2D-24A0A075B6R9 120 aa3.45□□□□□ -1.86
CLK1-202ENST00000409403 A0A1W2PNM2 257 aa3.45□□□□□ -1.86
CLK1-202ENST00000409403 DEFB112Q30KQ8 113 aa3.45□□□□□ -1.86
CLK1-202ENST00000409403 PLAC8Q9NZF1 115 aa3.45□□□□□ -1.86
CLK1-202ENST00000409403 LY6G6CO95867 125 aa3.44□□□□□ -1.86
CLK1-202ENST00000409403 CNBPP62633 177 aaKnown RBP3.44□□□□□ -1.86
CLK1-202ENST00000409403 C9orf163Q8N9P6 203 aa3.44□□□□□ -1.86
CLK1-202ENST00000409403 C6orf48Q9UBA6 75 aa3.44□□□□□ -1.86
CLK1-202ENST00000409403 IGLV10-54A0A075B6I4 117 aa3.43□□□□□ -1.86
CLK1-202ENST00000409403 DEFB136Q30KP8 78 aa3.43□□□□□ -1.86
CLK1-202ENST00000409403 XAGE1AQ9HD64 81 aa3.43□□□□□ -1.86
CLK1-202ENST00000409403 KRTAP10-6P60371 365 aaPredicted RBP3.43□□□□□ -1.86
CLK1-202ENST00000409403 DEFB105AQ8NG35 78 aa3.43□□□□□ -1.86
CLK1-202ENST00000409403 CAMK2N2Q96S95 79 aa3.43□□□□□ -1.86
CLK1-202ENST00000409403 DNAH11Q96DT5 4516 aa3.42□□□□□ -1.86
CLK1-202ENST00000409403 GIG44P09565 113 aaPredicted RBP3.42□□□□□ -1.86
CLK1-202ENST00000409403 DEFB130BP0DP73 79 aa3.42□□□□□ -1.86
CLK1-202ENST00000409403 DEFB130AP0DP74 79 aa3.42□□□□□ -1.86
CLK1-202ENST00000409403 LINC00313P59037 77 aa3.42□□□□□ -1.86
CLK1-202ENST00000409403 LELP1Q5T871 98 aa3.42□□□□□ -1.86
CLK1-202ENST00000409403 Q6ZRX8 168 aa3.42□□□□□ -1.86
CLK1-202ENST00000409403 PRR34Q9NV39 138 aa3.42□□□□□ -1.86
CLK1-202ENST00000409403 SRRM2Q9UQ35 2752 aaKnown RBP3.42□□□□□ -1.86
CLK1-202ENST00000409403 WFDC13Q8IUB5 93 aa3.41□□□□□ -1.86
CLK1-202ENST00000409403 TP53AIP1Q9HCN2 124 aa3.41□□□□□ -1.86
CLK1-202ENST00000409403 FAT2Q9NYQ8 4349 aa3.41□□□□□ -1.86
CLK1-202ENST00000409403 FAT4Q6V0I7 4981 aa3.4□□□□□ -1.86
CLK1-202ENST00000409403 FLG2Q5D862 2391 aaPredicted RBP3.4□□□□□ -1.86
CLK1-202ENST00000409403 A0A1B0GVY2 172 aa3.4□□□□□ -1.86
CLK1-202ENST00000409403 WFDC10BQ8IUB3 73 aa3.4□□□□□ -1.86
CLK1-202ENST00000409403 MYCBP2O75592 4640 aa3.4□□□□□ -1.86
CLK1-202ENST00000409403 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
CLK1-202ENST00000409403 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
CLK1-202ENST00000409403 SPAG11AQ6PDA7 123 aa3.39□□□□□ -1.87
CLK1-202ENST00000409403 Q8NAQ8 132 aa3.39□□□□□ -1.87
CLK1-202ENST00000409403 SORL1Q92673 2214 aa3.38□□□□□ -1.87
CLK1-202ENST00000409403 DEFB131BA0A096LNP1 70 aa3.38□□□□□ -1.87
CLK1-202ENST00000409403 A8MWP4 228 aa3.38□□□□□ -1.87
CLK1-202ENST00000409403 C7orf33Q8WU49 177 aa3.38□□□□□ -1.87
CLK1-202ENST00000409403 RETNLBQ9BQ08 111 aa3.38□□□□□ -1.87
CLK1-202ENST00000409403 IGLV8-61A0A075B6I0 122 aa3.37□□□□□ -1.87
CLK1-202ENST00000409403 A0A096LPF7 62 aa3.37□□□□□ -1.87
CLK1-202ENST00000409403 SPRR1AP35321 89 aa3.37□□□□□ -1.87
CLK1-202ENST00000409403 SPINK7P58062 85 aa3.37□□□□□ -1.87
CLK1-202ENST00000409403 TYMSOSQ8TAI1 123 aa3.37□□□□□ -1.87
CLK1-202ENST00000409403 IGLV1-51P01701 117 aa3.36□□□□□ -1.87
CLK1-202ENST00000409403 TLX1NBP0CAT3 122 aa3.36□□□□□ -1.87
CLK1-202ENST00000409403 PKD1P98161 4303 aa3.35□□□□□ -1.87
CLK1-202ENST00000409403 DNAH2Q9P225 4427 aa3.35□□□□□ -1.87
CLK1-202ENST00000409403 KRTAP4-16G5E9R7 235 aaPredicted RBP3.35□□□□□ -1.87
CLK1-202ENST00000409403 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
CLK1-202ENST00000409403 VPS13DQ5THJ4 4388 aa3.35□□□□□ -1.87
CLK1-202ENST00000409403 IGLV1-50A0A075B6I6 118 aa3.34□□□□□ -1.87
CLK1-202ENST00000409403 A0A087WSZ3 146 aa3.34□□□□□ -1.87
CLK1-202ENST00000409403 IGFL1Q6UW32 110 aa3.34□□□□□ -1.87
CLK1-202ENST00000409403 APOBP04114 4563 aaKnown RBP3.34□□□□□ -1.87
CLK1-202ENST00000409403 DNAH6Q9C0G6 4158 aa3.34□□□□□ -1.88
CLK1-202ENST00000409403 RTL8CO15255 209 aa3.33□□□□□ -1.88
CLK1-202ENST00000409403 DEFB116Q30KQ4 102 aa3.33□□□□□ -1.88
CLK1-202ENST00000409403 Q6ZR54 194 aa3.33□□□□□ -1.88
CLK1-202ENST00000409403 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
CLK1-202ENST00000409403 H0Y9J4 135 aa3.33□□□□□ -1.88
CLK1-202ENST00000409403 CRCT1Q9UGL9 99 aa3.33□□□□□ -1.88
CLK1-202ENST00000409403 HRES1P13985 223 aa3.32□□□□□ -1.88
CLK1-202ENST00000409403 PCOTHQ58A44 107 aa3.32□□□□□ -1.88
CLK1-202ENST00000409403 SPATA8Q6RVD6 105 aa3.32□□□□□ -1.88
CLK1-202ENST00000409403 C15orf56Q8N910 161 aa3.32□□□□□ -1.88
CLK1-202ENST00000409403 MMP24-AS1A0A0U1RRL7 71 aa3.31□□□□□ -1.88
CLK1-202ENST00000409403 H3BNG1 76 aa3.31□□□□□ -1.88
CLK1-202ENST00000409403 SPART-AS1P0CW21 52 aa3.31□□□□□ -1.88
CLK1-202ENST00000409403 ACYP2P14621 99 aa3.31□□□□□ -1.88
CLK1-202ENST00000409403 DNAH17Q9UFH2 4485 aa3.31□□□□□ -1.88
CLK1-202ENST00000409403 IGKV2-24A0A0C4DH68 120 aa3.3□□□□□ -1.88
CLK1-202ENST00000409403 LINC00472Q9H8W2 130 aa3.3□□□□□ -1.88
CLK1-202ENST00000409403 UQCR11O14957 56 aa3.3□□□□□ -1.88
CLK1-202ENST00000409403 RPL37AP61513 92 aaKnown RBP3.3□□□□□ -1.88
CLK1-202ENST00000409403 KRTAP26-1Q6PEX3 210 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms