RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 K7EQZ3 153 aa3.73□□□□□ -1.81
GTF3C3-202ENST00000409364 PLA2G1BP04054 148 aaKnown RBP3.73□□□□□ -1.81
GTF3C3-202ENST00000409364 DEFB116Q30KQ4 102 aa3.73□□□□□ -1.81
GTF3C3-202ENST00000409364 DNAH5Q8TE73 4624 aa3.73□□□□□ -1.81
GTF3C3-202ENST00000409364 A8MWP4 228 aa3.73□□□□□ -1.81
GTF3C3-202ENST00000409364 NDUFB1O75438 58 aa3.73□□□□□ -1.81
GTF3C3-202ENST00000409364 FAM229BQ4G0N7 80 aa3.73□□□□□ -1.81
GTF3C3-202ENST00000409364 DNAH8Q96JB1 4490 aa3.72□□□□□ -1.81
GTF3C3-202ENST00000409364 FRAS1Q86XX4 4008 aa3.72□□□□□ -1.81
GTF3C3-202ENST00000409364 FAM236DA0A1B0GTK5 79 aa3.72□□□□□ -1.81
GTF3C3-202ENST00000409364 HCG22E2RYF7 251 aa3.72□□□□□ -1.81
GTF3C3-202ENST00000409364 FAM236CP0DP71 79 aa3.72□□□□□ -1.81
GTF3C3-202ENST00000409364 PRR15Q8IV56 129 aa3.72□□□□□ -1.81
GTF3C3-202ENST00000409364 A0A1B0GVY2 172 aa3.71□□□□□ -1.82
GTF3C3-202ENST00000409364 HRCT1Q6UXD1 115 aa3.71□□□□□ -1.82
GTF3C3-202ENST00000409364 OCR1Q9BZK8 76 aa3.71□□□□□ -1.82
GTF3C3-202ENST00000409364 FAT2Q9NYQ8 4349 aa3.71□□□□□ -1.82
GTF3C3-202ENST00000409364 RYR3Q15413 4870 aa3.71□□□□□ -1.82
GTF3C3-202ENST00000409364 PMAIP1Q13794 54 aa3.7□□□□□ -1.82
GTF3C3-202ENST00000409364 C20orf197Q8N268 126 aa3.7□□□□□ -1.82
GTF3C3-202ENST00000409364 PKD1P98161 4303 aa3.7□□□□□ -1.82
GTF3C3-202ENST00000409364 SPINK6Q6UWN8 80 aa3.7□□□□□ -1.82
GTF3C3-202ENST00000409364 LRP1BQ9NZR2 4599 aa3.69□□□□□ -1.82
GTF3C3-202ENST00000409364 CDK2AP2O75956 126 aa3.69□□□□□ -1.82
GTF3C3-202ENST00000409364 KLKP1Q107X0 134 aa3.69□□□□□ -1.82
GTF3C3-202ENST00000409364 Q96NJ1 140 aa3.69□□□□□ -1.82
GTF3C3-202ENST00000409364 ASB16-AS1Q495Z4 193 aa3.68□□□□□ -1.82
GTF3C3-202ENST00000409364 CASC2Q6XLA1 102 aa3.68□□□□□ -1.82
GTF3C3-202ENST00000409364 KRTAP29-1A8MX34 341 aaPredicted RBP3.67□□□□□ -1.82
GTF3C3-202ENST00000409364 NDUFC1O43677 76 aa3.67□□□□□ -1.82
GTF3C3-202ENST00000409364 KRTAP1-4P0C5Y4 121 aa3.67□□□□□ -1.82
GTF3C3-202ENST00000409364 Q5XG85 94 aa3.67□□□□□ -1.82
GTF3C3-202ENST00000409364 Q75L30 129 aa3.67□□□□□ -1.82
GTF3C3-202ENST00000409364 WFDC13Q8IUB5 93 aa3.67□□□□□ -1.82
GTF3C3-202ENST00000409364 TMEM254Q8TBM7 123 aa3.67□□□□□ -1.82
GTF3C3-202ENST00000409364 A0A087X002 238 aa3.67□□□□□ -1.82
GTF3C3-202ENST00000409364 TMEM258P61165 79 aa3.67□□□□□ -1.82
GTF3C3-202ENST00000409364 KRTAP13-2Q52LG2 175 aa3.67□□□□□ -1.82
GTF3C3-202ENST00000409364 A0A0U1RQV1 116 aa3.66□□□□□ -1.82
GTF3C3-202ENST00000409364 A0A1B0GVX0 72 aa3.65□□□□□ -1.82
GTF3C3-202ENST00000409364 hDV103S1A0JD37 113 aa3.65□□□□□ -1.82
GTF3C3-202ENST00000409364 SMR3BP02814 79 aaPredicted RBP3.65□□□□□ -1.82
GTF3C3-202ENST00000409364 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.82
GTF3C3-202ENST00000409364 CYSTM1Q9H1C7 97 aa3.65□□□□□ -1.82
GTF3C3-202ENST00000409364 SNURFQ9Y675 71 aa3.65□□□□□ -1.82
GTF3C3-202ENST00000409364 IGHV6-1A0A0B4J1U7 121 aa3.64□□□□□ -1.83
GTF3C3-202ENST00000409364 MMP24-AS1A0A0U1RRL7 71 aa3.64□□□□□ -1.83
GTF3C3-202ENST00000409364 TYMSOSQ8TAI1 123 aa3.64□□□□□ -1.83
GTF3C3-202ENST00000409364 LIMD2Q9BT23 127 aa3.64□□□□□ -1.83
GTF3C3-202ENST00000409364 C8orf17Q9NRJ1 99 aa3.64□□□□□ -1.83
GTF3C3-202ENST00000409364 H7BZZ5 65 aa3.64□□□□□ -1.83
GTF3C3-202ENST00000409364 SPINK1P00995 79 aa3.64□□□□□ -1.83
GTF3C3-202ENST00000409364 DYNC1H1Q14204 4646 aaKnown RBP3.63□□□□□ -1.83
GTF3C3-202ENST00000409364 MP68P56378 58 aa3.63□□□□□ -1.83
GTF3C3-202ENST00000409364 SPAG11AQ6PDA7 123 aa3.63□□□□□ -1.83
GTF3C3-202ENST00000409364 TP53AIP1Q9HCN2 124 aa3.63□□□□□ -1.83
GTF3C3-202ENST00000409364 H3BPC8 53 aa3.62□□□□□ -1.83
GTF3C3-202ENST00000409364 VPS13BQ7Z7G8 4022 aa3.62□□□□□ -1.83
GTF3C3-202ENST00000409364 C8orf87E5RJ46 101 aa3.61□□□□□ -1.83
GTF3C3-202ENST00000409364 KRTAP10-4P60372 401 aaPredicted RBP3.61□□□□□ -1.83
GTF3C3-202ENST00000409364 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
GTF3C3-202ENST00000409364 RPS29P62273 56 aaKnown RBP3.61□□□□□ -1.83
GTF3C3-202ENST00000409364 MRPL34Q9BQ48 92 aaKnown RBP3.61□□□□□ -1.83
GTF3C3-202ENST00000409364 PKHD1P08F94 4074 aa3.61□□□□□ -1.83
GTF3C3-202ENST00000409364 ATP5EP56381 51 aaPredicted RBP3.6□□□□□ -1.83
GTF3C3-202ENST00000409364 LINC00313P59037 77 aa3.6□□□□□ -1.83
GTF3C3-202ENST00000409364 ZCCHC13Q8WW36 166 aaKnown RBP3.6□□□□□ -1.83
GTF3C3-202ENST00000409364 H0Y9P7 68 aa3.59□□□□□ -1.83
GTF3C3-202ENST00000409364 LINC00304Q8N9R0 145 aa3.59□□□□□ -1.83
GTF3C3-202ENST00000409364 TRAV22A0A0B4J277 110 aa3.58□□□□□ -1.84
GTF3C3-202ENST00000409364 NDUFS5O43920 106 aa3.58□□□□□ -1.84
GTF3C3-202ENST00000409364 NOTCH2NLQ7Z3S9 236 aa3.58□□□□□ -1.84
GTF3C3-202ENST00000409364 LINC00208Q96KT6 92 aa3.58□□□□□ -1.84
GTF3C3-202ENST00000409364 SEC61BP60468 96 aaKnown RBP3.57□□□□□ -1.84
GTF3C3-202ENST00000409364 C1orf64Q8NEQ6 169 aa3.57□□□□□ -1.84
GTF3C3-202ENST00000409364 EPPK1P58107 5090 aaKnown RBP3.57□□□□□ -1.84
GTF3C3-202ENST00000409364 RBM12B-AS1Q9P1G2 102 aa3.56□□□□□ -1.84
GTF3C3-202ENST00000409364 SERP1Q9Y6X1 66 aa3.56□□□□□ -1.84
GTF3C3-202ENST00000409364 APOBP04114 4563 aaKnown RBP3.56□□□□□ -1.84
GTF3C3-202ENST00000409364 Q8N9P0 234 aaPredicted RBP3.55□□□□□ -1.84
GTF3C3-202ENST00000409364 FAT1Q14517 4588 aa3.55□□□□□ -1.84
GTF3C3-202ENST00000409364 Q5VSD8 79 aa3.53□□□□□ -1.84
GTF3C3-202ENST00000409364 SPANXA2-OT1Q8N9U9 137 aa3.53□□□□□ -1.84
GTF3C3-202ENST00000409364 LOC101927531A0A1B0GV80 90 aa3.53□□□□□ -1.85
GTF3C3-202ENST00000409364 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
GTF3C3-202ENST00000409364 CYP4F30PQ9H0H9 118 aa3.52□□□□□ -1.85
GTF3C3-202ENST00000409364 KIAA1109Q2LD37 5005 aa3.51□□□□□ -1.85
GTF3C3-202ENST00000409364 KRTAP16-1A8MUX0 517 aa3.51□□□□□ -1.85
GTF3C3-202ENST00000409364 Q5W150 140 aa3.51□□□□□ -1.85
GTF3C3-202ENST00000409364 RYR1P21817 5038 aa3.51□□□□□ -1.85
GTF3C3-202ENST00000409364 IGLV7-46A0A075B6I9 117 aa3.5□□□□□ -1.85
GTF3C3-202ENST00000409364 KRTAP10-8P60410 259 aa3.5□□□□□ -1.85
GTF3C3-202ENST00000409364 KRTAP13-3Q3SY46 172 aa3.5□□□□□ -1.85
GTF3C3-202ENST00000409364 BIRC6Q9NR09 4857 aa3.49□□□□□ -1.85
GTF3C3-202ENST00000409364 SMIM26A0A096LP01 95 aa3.49□□□□□ -1.85
GTF3C3-202ENST00000409364 Q8N1X5 172 aa3.49□□□□□ -1.85
GTF3C3-202ENST00000409364 BRK1Q8WUW1 75 aa3.49□□□□□ -1.85
GTF3C3-202ENST00000409364 PCOTHQ58A44 107 aa3.48□□□□□ -1.85
GTF3C3-202ENST00000409364 PRR4Q16378 134 aa3.47□□□□□ -1.85
GTF3C3-202ENST00000409364 HSPG2P98160 4391 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms