RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 VPS13AQ96RL7 3174 aa0.75□□□□□ -2.29
CUL3-203ENST00000409096 NDUFB1O75438 58 aa0.74□□□□□ -2.29
CUL3-203ENST00000409096 SPRR2DP22532 72 aa0.74□□□□□ -2.29
CUL3-203ENST00000409096 C10orf99Q6UWK7 81 aa0.74□□□□□ -2.29
CUL3-203ENST00000409096 V9GYV3 84 aa0.74□□□□□ -2.29
CUL3-203ENST00000409096 TNCP24821 2201 aa0.74□□□□□ -2.29
CUL3-203ENST00000409096 FAT1Q14517 4588 aa0.74□□□□□ -2.29
CUL3-203ENST00000409096 F5P12259 2224 aa0.74□□□□□ -2.29
CUL3-203ENST00000409096 A0A1B0GUT8 65 aa0.74□□□□□ -2.29
CUL3-203ENST00000409096 IFI6P09912 130 aa0.74□□□□□ -2.29
CUL3-203ENST00000409096 S100A3P33764 101 aa0.74□□□□□ -2.29
CUL3-203ENST00000409096 TMEM263Q8WUH6 116 aaKnown RBP0.74□□□□□ -2.29
CUL3-203ENST00000409096 FXYD6Q9H0Q3 95 aa0.74□□□□□ -2.29
CUL3-203ENST00000409096 SNURFQ9Y675 71 aa0.74□□□□□ -2.29
CUL3-203ENST00000409096 CHD9Q3L8U1 2897 aa0.74□□□□□ -2.29
CUL3-203ENST00000409096 MUC12Q9UKN1 5478 aa0.74□□□□□ -2.29
CUL3-203ENST00000409096 COX6B1P14854 86 aa0.73□□□□□ -2.29
CUL3-203ENST00000409096 RPL37AP61513 92 aaKnown RBP0.73□□□□□ -2.29
CUL3-203ENST00000409096 COX17Q14061 63 aa0.73□□□□□ -2.29
CUL3-203ENST00000409096 TMEM14CQ9P0S9 112 aa0.73□□□□□ -2.29
CUL3-203ENST00000409096 SPTBN1Q01082 2364 aaKnown RBP0.73□□□□□ -2.29
CUL3-203ENST00000409096 A0A087WVE0 104 aa0.73□□□□□ -2.29
CUL3-203ENST00000409096 LINC01549A6NIU2 74 aa0.73□□□□□ -2.29
CUL3-203ENST00000409096 H0Y9P7 68 aa0.73□□□□□ -2.29
CUL3-203ENST00000409096 SPINT3P49223 89 aa0.73□□□□□ -2.29
CUL3-203ENST00000409096 SPINK7P58062 85 aa0.73□□□□□ -2.29
CUL3-203ENST00000409096 NMES1Q9C002 83 aa0.73□□□□□ -2.29
CUL3-203ENST00000409096 DNAH5Q8TE73 4624 aa0.73□□□□□ -2.29
CUL3-203ENST00000409096 CNTRLQ7Z7A1 2325 aa0.73□□□□□ -2.29
CUL3-203ENST00000409096 PKD1P98161 4303 aa0.73□□□□□ -2.29
CUL3-203ENST00000409096 A0A096LNT2 108 aa0.73□□□□□ -2.29
CUL3-203ENST00000409096 H3BVH4 76 aa0.73□□□□□ -2.29
CUL3-203ENST00000409096 FXYD4P59646 89 aa0.73□□□□□ -2.29
CUL3-203ENST00000409096 SMIM4Q8WVI0 70 aa0.73□□□□□ -2.29
CUL3-203ENST00000409096 FAM103A1Q9BTL3 118 aaKnown RBP0.73□□□□□ -2.29
CUL3-203ENST00000409096 CADP27708 2225 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 ABCA1O95477 2261 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 FREM2Q5SZK8 3169 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 HRNRQ86YZ3 2850 aaPredicted RBP0.72□□□□□ -2.29
CUL3-203ENST00000409096 DMXL2Q8TDJ6 3036 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.72□□□□□ -2.29
CUL3-203ENST00000409096 SPRR2EP22531 72 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 SPRR2BP35325 72 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 SPRR2AP35326 72 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 LINC00208Q96KT6 92 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 WFDC10AQ9H1F0 79 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 CMC2Q9NRP2 79 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 GNG13Q9P2W3 67 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 TRAV21A0A0B4J279 112 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 TRBV6-1A0A0K0K1D8 114 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 LINC00959A0A1B0GUT2 108 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 M0R3E3 92 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 DNAL4O96015 105 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 C10orf113Q5VZT2 155 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 NCBP2-AS2Q69YL0 99 aa0.72□□□□□ -2.29
CUL3-203ENST00000409096 TRGV1A0A0A0MS02 117 aa0.71□□□□□ -2.3
CUL3-203ENST00000409096 NREPQ16612 68 aa0.71□□□□□ -2.3
CUL3-203ENST00000409096 TOMM5Q8N4H5 51 aa0.71□□□□□ -2.3
CUL3-203ENST00000409096 DEFB124Q8NES8 71 aa0.71□□□□□ -2.3
CUL3-203ENST00000409096 LAMA1P25391 3075 aa0.71□□□□□ -2.3
CUL3-203ENST00000409096 KNTC1P50748 2209 aa0.71□□□□□ -2.3
CUL3-203ENST00000409096 SVEP1Q4LDE5 3571 aa0.71□□□□□ -2.3
CUL3-203ENST00000409096 WDFY3Q8IZQ1 3526 aa0.71□□□□□ -2.3
CUL3-203ENST00000409096 CTXND1A0A1B0GTU2 59 aa0.71□□□□□ -2.3
CUL3-203ENST00000409096 LINC01546A6NGU7 62 aa0.71□□□□□ -2.3
CUL3-203ENST00000409096 CAV3P56539 151 aa0.71□□□□□ -2.3
CUL3-203ENST00000409096 DEFB114Q30KQ6 69 aa0.71□□□□□ -2.3
CUL3-203ENST00000409096 FDCSPQ8NFU4 85 aa0.71□□□□□ -2.3
CUL3-203ENST00000409096 ASCC3Q8N3C0 2202 aaKnown RBP0.7□□□□□ -2.3
CUL3-203ENST00000409096 ARL14EPLP0DKL9 152 aa0.7□□□□□ -2.3
CUL3-203ENST00000409096 DEFB107AQ8IZN7 70 aa0.7□□□□□ -2.3
CUL3-203ENST00000409096 URB1O60287 2271 aaKnown RBP0.7□□□□□ -2.3
CUL3-203ENST00000409096 PKDREJQ9NTG1 2253 aa0.7□□□□□ -2.3
CUL3-203ENST00000409096 PLAC4Q8WY50 150 aa0.7□□□□□ -2.3
CUL3-203ENST00000409096 DNAH2Q9P225 4427 aa0.69□□□□□ -2.3
CUL3-203ENST00000409096 TRAV1-2A0A0B4J238 106 aa0.69□□□□□ -2.3
CUL3-203ENST00000409096 IGIPA6NJ69 53 aa0.69□□□□□ -2.3
CUL3-203ENST00000409096 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.69□□□□□ -2.3
CUL3-203ENST00000409096 SMIM27A0A1W2PRY6 76 aa0.69□□□□□ -2.3
CUL3-203ENST00000409096 G3V318 75 aa0.69□□□□□ -2.3
CUL3-203ENST00000409096 K7EMI3 77 aa0.69□□□□□ -2.3
CUL3-203ENST00000409096 Q6ZQY7 126 aa0.69□□□□□ -2.3
CUL3-203ENST00000409096 KCNQ1DNQ9H478 68 aa0.69□□□□□ -2.3
CUL3-203ENST00000409096 GVQW2A0A096LPI5 108 aaPredicted RBP0.68□□□□□ -2.3
CUL3-203ENST00000409096 ENHOQ6UWT2 76 aa0.68□□□□□ -2.3
CUL3-203ENST00000409096 CCL19Q99731 98 aa0.68□□□□□ -2.3
CUL3-203ENST00000409096 ABRACLQ9P1F3 81 aa0.68□□□□□ -2.3
CUL3-203ENST00000409096 LY6G6CO95867 125 aa0.68□□□□□ -2.3
CUL3-203ENST00000409096 ACYP2P14621 99 aa0.68□□□□□ -2.3
CUL3-203ENST00000409096 UBL5Q9BZL1 73 aa0.68□□□□□ -2.3
CUL3-203ENST00000409096 NCR3O14931 201 aa0.67□□□□□ -2.3
CUL3-203ENST00000409096 COX7BP24311 80 aa0.67□□□□□ -2.3
CUL3-203ENST00000409096 Q6ZRX8 168 aa0.67□□□□□ -2.3
CUL3-203ENST00000409096 SMIM11BQ8TCY0 68 aa0.67□□□□□ -2.3
CUL3-203ENST00000409096 GAFA1Q96PS6 74 aa0.67□□□□□ -2.3
CUL3-203ENST00000409096 GOLGA4Q13439 2230 aaKnown RBP0.67□□□□□ -2.3
CUL3-203ENST00000409096 PRH1P02810 166 aa0.67□□□□□ -2.3
CUL3-203ENST00000409096 SERF2P84101 59 aa0.67□□□□□ -2.3
CUL3-203ENST00000409096 SPINK13Q1W4C9 94 aa0.67□□□□□ -2.3
CUL3-203ENST00000409096 DEFB112Q30KQ8 113 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms