RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 PRR15LQ9BU68 103 aa6.05□□□□□ -1.44
NIF3L1-202ENST00000409020 C6orf99Q4VX62 202 aa6.04□□□□□ -1.44
NIF3L1-202ENST00000409020 IGKV2-28A0A075B6P5 120 aa6.03□□□□□ -1.44
NIF3L1-202ENST00000409020 IGKV2D-28P01615 120 aa6.03□□□□□ -1.44
NIF3L1-202ENST00000409020 CASC2Q6XLA1 102 aa6.03□□□□□ -1.44
NIF3L1-202ENST00000409020 SND1-IT1Q9HBX3 110 aa6.03□□□□□ -1.44
NIF3L1-202ENST00000409020 RNF213Q63HN8 5207 aa6.02□□□□□ -1.45
NIF3L1-202ENST00000409020 MT1HL1P0DM35 61 aa6.02□□□□□ -1.45
NIF3L1-202ENST00000409020 IGHV6-1A0A0B4J1U7 121 aa6.01□□□□□ -1.45
NIF3L1-202ENST00000409020 NOTCH2NLQ7Z3S9 236 aa6□□□□□ -1.45
NIF3L1-202ENST00000409020 SPANXA2-OT1Q8N9U9 137 aa6□□□□□ -1.45
NIF3L1-202ENST00000409020 CDKN2A-AS1Q9UH64 79 aa6□□□□□ -1.45
NIF3L1-202ENST00000409020 LPAP08519 4548 aa5.99□□□□□ -1.45
NIF3L1-202ENST00000409020 A0A1W2PNN7 141 aa5.99□□□□□ -1.45
NIF3L1-202ENST00000409020 SPAG11BQ08648 103 aa5.99□□□□□ -1.45
NIF3L1-202ENST00000409020 C7orf33Q8WU49 177 aa5.99□□□□□ -1.45
NIF3L1-202ENST00000409020 ZNF706Q9Y5V0 76 aaPredicted RBP5.99□□□□□ -1.45
NIF3L1-202ENST00000409020 IGKV4-1P06312 121 aa5.98□□□□□ -1.45
NIF3L1-202ENST00000409020 C10orf25Q5T742 122 aa5.98□□□□□ -1.45
NIF3L1-202ENST00000409020 CAMK2N2Q96S95 79 aa5.98□□□□□ -1.45
NIF3L1-202ENST00000409020 LINC00208Q96KT6 92 aa5.97□□□□□ -1.45
NIF3L1-202ENST00000409020 SMIM1B2RUZ4 78 aa5.96□□□□□ -1.46
NIF3L1-202ENST00000409020 FAM168BA1KXE4 195 aa5.95□□□□□ -1.46
NIF3L1-202ENST00000409020 LINC00242Q5T6M2 205 aa5.95□□□□□ -1.46
NIF3L1-202ENST00000409020 UNQ6190/PRO20217Q6UXQ8 127 aa5.94□□□□□ -1.46
NIF3L1-202ENST00000409020 C6orf48Q9UBA6 75 aa5.94□□□□□ -1.46
NIF3L1-202ENST00000409020 KRTAP11-1Q8IUC1 163 aa5.94□□□□□ -1.46
NIF3L1-202ENST00000409020 A0A1B0GW54 56 aa5.93□□□□□ -1.46
NIF3L1-202ENST00000409020 RETNLBQ9BQ08 111 aa5.93□□□□□ -1.46
NIF3L1-202ENST00000409020 LINC01558Q9Y6Z2 57 aa5.93□□□□□ -1.46
NIF3L1-202ENST00000409020 ETDCA0A1B0GVM5 59 aa5.92□□□□□ -1.46
NIF3L1-202ENST00000409020 KRTAP7-1Q8IUC3 87 aa5.92□□□□□ -1.46
NIF3L1-202ENST00000409020 PSORS1C2Q9UIG4 136 aa5.92□□□□□ -1.46
NIF3L1-202ENST00000409020 PRAC1Q96KF2 57 aa5.91□□□□□ -1.46
NIF3L1-202ENST00000409020 H3BPC8 53 aa5.9□□□□□ -1.47
NIF3L1-202ENST00000409020 SPINK6Q6UWN8 80 aa5.9□□□□□ -1.47
NIF3L1-202ENST00000409020 LINC00575Q6W349 94 aa5.9□□□□□ -1.47
NIF3L1-202ENST00000409020 COX7B2Q8TF08 81 aa5.89□□□□□ -1.47
NIF3L1-202ENST00000409020 TLX1NBP0CAT3 122 aa5.88□□□□□ -1.47
NIF3L1-202ENST00000409020 LINC00158P58513 81 aa5.88□□□□□ -1.47
NIF3L1-202ENST00000409020 KRTAP10-8P60410 259 aa5.88□□□□□ -1.47
NIF3L1-202ENST00000409020 C1orf137Q5JT78 98 aa5.88□□□□□ -1.47
NIF3L1-202ENST00000409020 COX7BP24311 80 aa5.88□□□□□ -1.47
NIF3L1-202ENST00000409020 TOMM7Q9P0U1 55 aa5.87□□□□□ -1.47
NIF3L1-202ENST00000409020 KCNQ1DNQ9H478 68 aa5.86□□□□□ -1.47
NIF3L1-202ENST00000409020 MUC2Q02817 5179 aa5.86□□□□□ -1.47
NIF3L1-202ENST00000409020 REG3GQ6UW15 175 aa5.85□□□□□ -1.47
NIF3L1-202ENST00000409020 SMIM29Q86T20 159 aa5.85□□□□□ -1.47
NIF3L1-202ENST00000409020 IGLV7-43P04211 117 aa5.84□□□□□ -1.47
NIF3L1-202ENST00000409020 Q8IZM0 81 aa5.84□□□□□ -1.47
NIF3L1-202ENST00000409020 XAGE1AQ9HD64 81 aa5.84□□□□□ -1.47
NIF3L1-202ENST00000409020 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.82□□□□□ -1.48
NIF3L1-202ENST00000409020 PRR4Q16378 134 aa5.81□□□□□ -1.48
NIF3L1-202ENST00000409020 A0A1W2PNM2 257 aa5.79□□□□□ -1.48
NIF3L1-202ENST00000409020 KRTAP1-4P0C5Y4 121 aa5.79□□□□□ -1.48
NIF3L1-202ENST00000409020 XP32Q5T750 250 aa5.79□□□□□ -1.48
NIF3L1-202ENST00000409020 COA5Q86WW8 74 aa5.79□□□□□ -1.48
NIF3L1-202ENST00000409020 Q8N9L7 120 aa5.79□□□□□ -1.48
NIF3L1-202ENST00000409020 SPINK7P58062 85 aa5.79□□□□□ -1.48
NIF3L1-202ENST00000409020 ADM2Q7Z4H4 148 aa5.79□□□□□ -1.48
NIF3L1-202ENST00000409020 ROMO1P60602 79 aa5.76□□□□□ -1.49
NIF3L1-202ENST00000409020 ST20-AS1Q8NBB2 130 aa5.76□□□□□ -1.49
NIF3L1-202ENST00000409020 RPL37AP8A6NKH3 93 aa5.75□□□□□ -1.49
NIF3L1-202ENST00000409020 H0Y9P7 68 aa5.75□□□□□ -1.49
NIF3L1-202ENST00000409020 COX17Q14061 63 aa5.75□□□□□ -1.49
NIF3L1-202ENST00000409020 SPAG11AQ6PDA7 123 aa5.75□□□□□ -1.49
NIF3L1-202ENST00000409020 IGLV7-46A0A075B6I9 117 aa5.74□□□□□ -1.49
NIF3L1-202ENST00000409020 ZNF861PO60384 105 aa5.74□□□□□ -1.49
NIF3L1-202ENST00000409020 Q6ZQY7 126 aa5.74□□□□□ -1.49
NIF3L1-202ENST00000409020 CSAG1Q6PB30 78 aa5.73□□□□□ -1.49
NIF3L1-202ENST00000409020 Q8NDZ9 215 aa5.73□□□□□ -1.49
NIF3L1-202ENST00000409020 ANAPC11Q9NYG5 84 aa5.72□□□□□ -1.49
NIF3L1-202ENST00000409020 IGLV1-50A0A075B6I6 118 aa5.71□□□□□ -1.5
NIF3L1-202ENST00000409020 IGLV5-37A0A075B6J1 123 aa5.71□□□□□ -1.5
NIF3L1-202ENST00000409020 KRTAP13-1Q8IUC0 172 aa5.7□□□□□ -1.5
NIF3L1-202ENST00000409020 MUC17Q685J3 4493 aa5.7□□□□□ -1.5
NIF3L1-202ENST00000409020 SPATA8Q6RVD6 105 aa5.69□□□□□ -1.5
NIF3L1-202ENST00000409020 KRTAP23-1A1A580 65 aa5.68□□□□□ -1.5
NIF3L1-202ENST00000409020 IGLV6-57P01721 117 aa5.67□□□□□ -1.5
NIF3L1-202ENST00000409020 PRLHP81277 87 aa5.67□□□□□ -1.5
NIF3L1-202ENST00000409020 KRTAP13-2Q52LG2 175 aa5.66□□□□□ -1.5
NIF3L1-202ENST00000409020 MIR22HGQ0VDD5 57 aa5.65□□□□□ -1.51
NIF3L1-202ENST00000409020 FAT4Q6V0I7 4981 aa5.64□□□□□ -1.51
NIF3L1-202ENST00000409020 DSCR10P59022 87 aa5.64□□□□□ -1.51
NIF3L1-202ENST00000409020 KRTAP16-1A8MUX0 517 aa5.63□□□□□ -1.51
NIF3L1-202ENST00000409020 TYMSOSQ8TAI1 123 aa5.63□□□□□ -1.51
NIF3L1-202ENST00000409020 IGLV5-48A0A075B6I7 105 aa5.62□□□□□ -1.51
NIF3L1-202ENST00000409020 SEC61BP60468 96 aaKnown RBP5.59□□□□□ -1.51
NIF3L1-202ENST00000409020 K7EQZ3 153 aa5.59□□□□□ -1.52
NIF3L1-202ENST00000409020 SPRR4Q96PI1 79 aa5.59□□□□□ -1.52
NIF3L1-202ENST00000409020 KRTAP25-1Q3LHN0 102 aa5.58□□□□□ -1.52
NIF3L1-202ENST00000409020 A0A087WSZ3 146 aa5.57□□□□□ -1.52
NIF3L1-202ENST00000409020 LINC00304Q8N9R0 145 aa5.56□□□□□ -1.52
NIF3L1-202ENST00000409020 KRTAP3-1Q9BYR8 98 aa5.56□□□□□ -1.52
NIF3L1-202ENST00000409020 KRTAP4-16G5E9R7 235 aaPredicted RBP5.56□□□□□ -1.52
NIF3L1-202ENST00000409020 Q8NBF4 154 aa5.56□□□□□ -1.52
NIF3L1-202ENST00000409020 UQCR11O14957 56 aa5.55□□□□□ -1.52
NIF3L1-202ENST00000409020 SPRR1AP35321 89 aa5.55□□□□□ -1.52
NIF3L1-202ENST00000409020 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
NIF3L1-202ENST00000409020 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms