RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 CSAG1Q6PB30 78 aa13.35□□□□□ -0.27
CUEDC1-202ENST00000407144 TGP01266 2768 aa13.34□□□□□ -0.27
CUEDC1-202ENST00000407144 K7EIL1 84 aa13.31□□□□□ -0.28
CUEDC1-202ENST00000407144 KRTAP10-11P60412 298 aa13.31□□□□□ -0.28
CUEDC1-202ENST00000407144 Q5W150 140 aa13.31□□□□□ -0.28
CUEDC1-202ENST00000407144 KRTAP13-1Q8IUC0 172 aa13.3□□□□□ -0.28
CUEDC1-202ENST00000407144 COL7A1Q02388 2944 aa13.3□□□□□ -0.28
CUEDC1-202ENST00000407144 NOTCH2NLQ7Z3S9 236 aa13.27□□□□□ -0.28
CUEDC1-202ENST00000407144 CHTF8P0CG12 524 aa13.25□□□□□ -0.29
CUEDC1-202ENST00000407144 IGLV9-49A0A0B4J1Y8 123 aa13.24□□□□□ -0.29
CUEDC1-202ENST00000407144 LINC00483Q53H64 154 aa13.22□□□□□ -0.29
CUEDC1-202ENST00000407144 ZNF861PO60384 105 aa13.18□□□□□ -0.3
CUEDC1-202ENST00000407144 TENM3Q9P273 2699 aa13.17□□□□□ -0.3
CUEDC1-202ENST00000407144 DNAH9Q9NYC9 4486 aa13.16□□□□□ -0.3
CUEDC1-202ENST00000407144 SRRM2Q9UQ35 2752 aaKnown RBP13.15□□□□□ -0.3
CUEDC1-202ENST00000407144 C14orf177Q52M58 125 aa13.12□□□□□ -0.31
CUEDC1-202ENST00000407144 STAB2Q8WWQ8 2551 aa13.11□□□□□ -0.31
CUEDC1-202ENST00000407144 ZNF706Q9Y5V0 76 aaPredicted RBP13.08□□□□□ -0.31
CUEDC1-202ENST00000407144 WWC2-AS2Q96NR7 200 aa13.07□□□□□ -0.32
CUEDC1-202ENST00000407144 HUWE1Q7Z6Z7 4374 aaKnown RBP13.07□□□□□ -0.32
CUEDC1-202ENST00000407144 C1orf134Q5TEV5 83 aa13.07□□□□□ -0.32
CUEDC1-202ENST00000407144 FAM229AH3BQW9 127 aa13.03□□□□□ -0.32
CUEDC1-202ENST00000407144 IGLV7-43P04211 117 aa13.03□□□□□ -0.32
CUEDC1-202ENST00000407144 IGKV2-30P06310 120 aa13.03□□□□□ -0.32
CUEDC1-202ENST00000407144 KRTAP1-5Q9BYS1 174 aa12.99□□□□□ -0.33
CUEDC1-202ENST00000407144 ROMO1P60602 79 aa12.96□□□□□ -0.33
CUEDC1-202ENST00000407144 KRTAP25-1Q3LHN0 102 aa12.96□□□□□ -0.33
CUEDC1-202ENST00000407144 SPINK6Q6UWN8 80 aa12.93□□□□□ -0.34
CUEDC1-202ENST00000407144 CSMD3Q7Z407 3707 aa12.93□□□□□ -0.34
CUEDC1-202ENST00000407144 DNAH10Q8IVF4 4471 aa12.89□□□□□ -0.35
CUEDC1-202ENST00000407144 PANO1I0J062 215 aa12.88□□□□□ -0.35
CUEDC1-202ENST00000407144 A8MUU9 505 aa12.87□□□□□ -0.35
CUEDC1-202ENST00000407144 DNAH7Q8WXX0 4024 aa12.86□□□□□ -0.35
CUEDC1-202ENST00000407144 LYSTQ99698 3801 aa12.81□□□□□ -0.36
CUEDC1-202ENST00000407144 SPACA4Q8TDM5 124 aa12.81□□□□□ -0.36
CUEDC1-202ENST00000407144 IGKV2D-30A0A075B6S6 120 aa12.79□□□□□ -0.36
CUEDC1-202ENST00000407144 ANAPC11Q9NYG5 84 aa12.79□□□□□ -0.36
CUEDC1-202ENST00000407144 LY6G6CO95867 125 aa12.78□□□□□ -0.36
CUEDC1-202ENST00000407144 IGLV5-52A0A0A0MRZ9 124 aa12.77□□□□□ -0.37
CUEDC1-202ENST00000407144 LINC00304Q8N9R0 145 aa12.75□□□□□ -0.37
CUEDC1-202ENST00000407144 STARD9Q9P2P6 4700 aa12.75□□□□□ -0.37
CUEDC1-202ENST00000407144 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.73□□□□□ -0.37
CUEDC1-202ENST00000407144 PSORS1C2Q9UIG4 136 aa12.71□□□□□ -0.37
CUEDC1-202ENST00000407144 H0YAA0 97 aa12.68□□□□□ -0.38
CUEDC1-202ENST00000407144 UBE2DNLQ8IWF7 75 aa12.67□□□□□ -0.38
CUEDC1-202ENST00000407144 Q6ZSA8 131 aa12.66□□□□□ -0.38
CUEDC1-202ENST00000407144 CIRBP-AS1Q8TBR5 109 aa12.66□□□□□ -0.38
CUEDC1-202ENST00000407144 KRTAP16-1A8MUX0 517 aa12.65□□□□□ -0.38
CUEDC1-202ENST00000407144 SSBP3-AS1Q7Z2R9 100 aa12.65□□□□□ -0.38
CUEDC1-202ENST00000407144 PLECQ15149 4684 aaKnown RBP12.62□□□□□ -0.39
CUEDC1-202ENST00000407144 KMT2CQ8NEZ4 4911 aaKnown RBP12.6□□□□□ -0.39
CUEDC1-202ENST00000407144 DNAH8Q96JB1 4490 aa12.57□□□□□ -0.4
CUEDC1-202ENST00000407144 DYNC2H1Q8NCM8 4307 aaKnown RBP12.57□□□□□ -0.4
CUEDC1-202ENST00000407144 P0C880 135 aa12.56□□□□□ -0.4
CUEDC1-202ENST00000407144 Q6ZRN7 208 aaPredicted RBP12.56□□□□□ -0.4
CUEDC1-202ENST00000407144 APLNQ9ULZ1 77 aa12.55□□□□□ -0.4
CUEDC1-202ENST00000407144 SPINK1P00995 79 aa12.54□□□□□ -0.4
CUEDC1-202ENST00000407144 NBDYA0A0U1RRE5 68 aa12.49□□□□□ -0.41
CUEDC1-202ENST00000407144 A0A1B0GU33 70 aa12.49□□□□□ -0.41
CUEDC1-202ENST00000407144 SACSQ9NZJ4 4579 aa12.44□□□□□ -0.42
CUEDC1-202ENST00000407144 H1FX-AS1Q4G0G2 97 aa12.42□□□□□ -0.42
CUEDC1-202ENST00000407144 HYDINQ4G0P3 5121 aa12.41□□□□□ -0.42
CUEDC1-202ENST00000407144 FRAS1Q86XX4 4008 aa12.41□□□□□ -0.42
CUEDC1-202ENST00000407144 KMT2AQ03164 3969 aa12.41□□□□□ -0.42
CUEDC1-202ENST00000407144 K7ERS5 55 aa12.39□□□□□ -0.43
CUEDC1-202ENST00000407144 Q8N1X5 172 aa12.39□□□□□ -0.43
CUEDC1-202ENST00000407144 RYR3Q15413 4870 aa12.38□□□□□ -0.43
CUEDC1-202ENST00000407144 TYMSOSQ8TAI1 123 aa12.38□□□□□ -0.43
CUEDC1-202ENST00000407144 A0A087WTM6 91 aa12.35□□□□□ -0.43
CUEDC1-202ENST00000407144 VPS13DQ5THJ4 4388 aa12.34□□□□□ -0.43
CUEDC1-202ENST00000407144 NUPR2A6NF83 97 aa12.33□□□□□ -0.44
CUEDC1-202ENST00000407144 RYR2Q92736 4967 aa12.31□□□□□ -0.44
CUEDC1-202ENST00000407144 CRIPTQ9P021 101 aa12.27□□□□□ -0.45
CUEDC1-202ENST00000407144 KRTAP13-2Q52LG2 175 aa12.22□□□□□ -0.45
CUEDC1-202ENST00000407144 DNAH17Q9UFH2 4485 aa12.2□□□□□ -0.46
CUEDC1-202ENST00000407144 HECTD4Q9Y4D8 3996 aa12.2□□□□□ -0.46
CUEDC1-202ENST00000407144 DNAH2Q9P225 4427 aa12.17□□□□□ -0.46
CUEDC1-202ENST00000407144 SPINT4Q6UDR6 99 aa12.15□□□□□ -0.46
CUEDC1-202ENST00000407144 DNAH6Q9C0G6 4158 aa12.14□□□□□ -0.47
CUEDC1-202ENST00000407144 FLG2Q5D862 2391 aaPredicted RBP12.1□□□□□ -0.47
CUEDC1-202ENST00000407144 COX6B2Q6YFQ2 88 aa12.09□□□□□ -0.47
CUEDC1-202ENST00000407144 C20orf166-AS1Q96NR2 134 aa12.07□□□□□ -0.48
CUEDC1-202ENST00000407144 KRTAP3-1Q9BYR8 98 aa12.06□□□□□ -0.48
CUEDC1-202ENST00000407144 KRTAP15-1Q3LI76 137 aa12.05□□□□□ -0.48
CUEDC1-202ENST00000407144 TPRXLQ17RH7 258 aa12.02□□□□□ -0.48
CUEDC1-202ENST00000407144 NDUFAF8A1L188 74 aa12.01□□□□□ -0.49
CUEDC1-202ENST00000407144 FAT2Q9NYQ8 4349 aa12□□□□□ -0.49
CUEDC1-202ENST00000407144 RPL37P61927 97 aaKnown RBP11.99□□□□□ -0.49
CUEDC1-202ENST00000407144 EPPK1P58107 5090 aaKnown RBP11.95□□□□□ -0.5
CUEDC1-202ENST00000407144 PKHD1P08F94 4074 aa11.92□□□□□ -0.5
CUEDC1-202ENST00000407144 KRTAP1-4P0C5Y4 121 aa11.91□□□□□ -0.5
CUEDC1-202ENST00000407144 PKD1P98161 4303 aa11.89□□□□□ -0.51
CUEDC1-202ENST00000407144 DNAH11Q96DT5 4516 aa11.85□□□□□ -0.51
CUEDC1-202ENST00000407144 RPS29P62273 56 aaKnown RBP11.79□□□□□ -0.52
CUEDC1-202ENST00000407144 C10orf95Q9H7T3 257 aa11.74□□□□□ -0.53
CUEDC1-202ENST00000407144 DNAH5Q8TE73 4624 aa11.73□□□□□ -0.53
CUEDC1-202ENST00000407144 A0A0A0MQY5 61 aa11.72□□□□□ -0.53
CUEDC1-202ENST00000407144 KRTAP10-6P60371 365 aaPredicted RBP11.72□□□□□ -0.53
CUEDC1-202ENST00000407144 KRTAP13-4Q3LI77 160 aa11.68□□□□□ -0.54
CUEDC1-202ENST00000407144 A0A1B0GVY2 172 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms