RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 BIRC6Q9NR09 4857 aa2.46□□□□□ -2.02
HMGB3P19-201ENST00000403971 IGLV5-48A0A075B6I7 105 aa2.45□□□□□ -2.02
HMGB3P19-201ENST00000403971 K7EP34 96 aa2.45□□□□□ -2.02
HMGB3P19-201ENST00000403971 SPRR1BP22528 89 aa2.45□□□□□ -2.02
HMGB3P19-201ENST00000403971 RPL37AP61513 92 aaKnown RBP2.45□□□□□ -2.02
HMGB3P19-201ENST00000403971 HAMPP81172 84 aa2.45□□□□□ -2.02
HMGB3P19-201ENST00000403971 LINC01600Q96MT4 127 aa2.45□□□□□ -2.02
HMGB3P19-201ENST00000403971 HIGD2AQ9BW72 106 aa2.45□□□□□ -2.02
HMGB3P19-201ENST00000403971 ZNF706Q9Y5V0 76 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P19-201ENST00000403971 A0A1B0GV90 55 aa2.44□□□□□ -2.02
HMGB3P19-201ENST00000403971 H3BMG7 143 aa2.44□□□□□ -2.02
HMGB3P19-201ENST00000403971 H3BT86 120 aa2.44□□□□□ -2.02
HMGB3P19-201ENST00000403971 TMEM256-PLSCR3K7ERE1 68 aa2.44□□□□□ -2.02
HMGB3P19-201ENST00000403971 ERC2-IT1O76042 136 aa2.44□□□□□ -2.02
HMGB3P19-201ENST00000403971 SMR3BP02814 79 aaPredicted RBP2.44□□□□□ -2.02
HMGB3P19-201ENST00000403971 KRTAP10-4P60372 401 aaPredicted RBP2.44□□□□□ -2.02
HMGB3P19-201ENST00000403971 SPINK6Q6UWN8 80 aa2.44□□□□□ -2.02
HMGB3P19-201ENST00000403971 Q6ZQY7 126 aa2.44□□□□□ -2.02
HMGB3P19-201ENST00000403971 C1orf64Q8NEQ6 169 aa2.44□□□□□ -2.02
HMGB3P19-201ENST00000403971 ORMDL1Q9P0S3 153 aa2.44□□□□□ -2.02
HMGB3P19-201ENST00000403971 SRRM2Q9UQ35 2752 aaKnown RBP2.44□□□□□ -2.02
HMGB3P19-201ENST00000403971 TEX49A0A1B0GTD5 131 aa2.43□□□□□ -2.02
HMGB3P19-201ENST00000403971 C9JAW5 83 aa2.43□□□□□ -2.02
HMGB3P19-201ENST00000403971 F8W1H4 67 aa2.43□□□□□ -2.02
HMGB3P19-201ENST00000403971 BAALC-AS2P0C853 105 aa2.43□□□□□ -2.02
HMGB3P19-201ENST00000403971 SPRR4Q96PI1 79 aa2.43□□□□□ -2.02
HMGB3P19-201ENST00000403971 PKHD1L1Q86WI1 4243 aa2.42□□□□□ -2.02
HMGB3P19-201ENST00000403971 IGKV4-1P06312 121 aa2.42□□□□□ -2.02
HMGB3P19-201ENST00000403971 FAM229BQ4G0N7 80 aa2.42□□□□□ -2.02
HMGB3P19-201ENST00000403971 Q5VSD8 79 aa2.42□□□□□ -2.02
HMGB3P19-201ENST00000403971 ANKRD29Q8N6D5 301 aa2.42□□□□□ -2.02
HMGB3P19-201ENST00000403971 FAT3Q8TDW7 4589 aa2.42□□□□□ -2.02
HMGB3P19-201ENST00000403971 JMJD7-PLA2G4BH0Y9G9 81 aa2.41□□□□□ -2.02
HMGB3P19-201ENST00000403971 LAMTOR3Q9UHA4 124 aa2.41□□□□□ -2.02
HMGB3P19-201ENST00000403971 HERC2O95714 4834 aa2.41□□□□□ -2.02
HMGB3P19-201ENST00000403971 LRP1Q07954 4544 aaKnown RBP2.4□□□□□ -2.02
HMGB3P19-201ENST00000403971 PDE6GP18545 87 aa2.4□□□□□ -2.03
HMGB3P19-201ENST00000403971 TEN1Q86WV5 123 aa2.4□□□□□ -2.03
HMGB3P19-201ENST00000403971 DEFB105AQ8NG35 78 aa2.4□□□□□ -2.03
HMGB3P19-201ENST00000403971 OBSCN-AS1Q96MR7 158 aa2.4□□□□□ -2.03
HMGB3P19-201ENST00000403971 FLG2Q5D862 2391 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P19-201ENST00000403971 TRBV7-4A0A0J9YYF1 115 aa2.39□□□□□ -2.03
HMGB3P19-201ENST00000403971 A0A1B0GW54 56 aa2.39□□□□□ -2.03
HMGB3P19-201ENST00000403971 F8WEM9 126 aa2.39□□□□□ -2.03
HMGB3P19-201ENST00000403971 NDUFS5O43920 106 aa2.39□□□□□ -2.03
HMGB3P19-201ENST00000403971 CRYGAP11844 174 aa2.39□□□□□ -2.03
HMGB3P19-201ENST00000403971 RBM3P98179 157 aaKnown RBP2.39□□□□□ -2.03
HMGB3P19-201ENST00000403971 Q6JHZ5 121 aa2.39□□□□□ -2.03
HMGB3P19-201ENST00000403971 SSBP3-AS1Q7Z2R9 100 aa2.39□□□□□ -2.03
HMGB3P19-201ENST00000403971 LOC110117498A0A087WWA1 95 aa2.38□□□□□ -2.03
HMGB3P19-201ENST00000403971 ETDBQ3ZM63 59 aa2.38□□□□□ -2.03
HMGB3P19-201ENST00000403971 ADM2Q7Z4H4 148 aa2.38□□□□□ -2.03
HMGB3P19-201ENST00000403971 C3orf22Q8N5N4 141 aa2.38□□□□□ -2.03
HMGB3P19-201ENST00000403971 DSCR8Q96T75 97 aa2.38□□□□□ -2.03
HMGB3P19-201ENST00000403971 DMBT1Q9UGM3 2413 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P19-201ENST00000403971 FAM240AA0A1B0GVK7 77 aa2.37□□□□□ -2.03
HMGB3P19-201ENST00000403971 CD164Q04900 197 aa2.37□□□□□ -2.03
HMGB3P19-201ENST00000403971 Q6Q795 121 aa2.37□□□□□ -2.03
HMGB3P19-201ENST00000403971 TNXBP22105 4242 aa2.37□□□□□ -2.03
HMGB3P19-201ENST00000403971 MYCBP2O75592 4640 aa2.37□□□□□ -2.03
HMGB3P19-201ENST00000403971 CCKP06307 115 aa2.36□□□□□ -2.03
HMGB3P19-201ENST00000403971 P0C880 135 aa2.36□□□□□ -2.03
HMGB3P19-201ENST00000403971 C9orf153Q5TBE3 101 aa2.36□□□□□ -2.03
HMGB3P19-201ENST00000403971 SPAG11AQ6PDA7 123 aa2.36□□□□□ -2.03
HMGB3P19-201ENST00000403971 Q6ZQT0 140 aa2.36□□□□□ -2.03
HMGB3P19-201ENST00000403971 C14orf132Q9NPU4 83 aa2.36□□□□□ -2.03
HMGB3P19-201ENST00000403971 J3QR89 54 aa2.35□□□□□ -2.03
HMGB3P19-201ENST00000403971 ACYP1P07311 99 aa2.35□□□□□ -2.03
HMGB3P19-201ENST00000403971 RPS29P62273 56 aaKnown RBP2.35□□□□□ -2.03
HMGB3P19-201ENST00000403971 Q5XG85 94 aa2.35□□□□□ -2.03
HMGB3P19-201ENST00000403971 TRBV7-7A0A0K0K1E9 115 aa2.34□□□□□ -2.03
HMGB3P19-201ENST00000403971 A0A1W2PNM2 257 aa2.34□□□□□ -2.03
HMGB3P19-201ENST00000403971 K7ERU9 68 aa2.34□□□□□ -2.03
HMGB3P19-201ENST00000403971 SPINK1P00995 79 aa2.34□□□□□ -2.03
HMGB3P19-201ENST00000403971 ASB16-AS1Q495Z4 193 aa2.34□□□□□ -2.03
HMGB3P19-201ENST00000403971 PRO0628Q9UI54 55 aa2.34□□□□□ -2.03
HMGB3P19-201ENST00000403971 A0A1B0GV72 72 aa2.33□□□□□ -2.04
HMGB3P19-201ENST00000403971 MT1HL1P0DM35 61 aa2.33□□□□□ -2.04
HMGB3P19-201ENST00000403971 HRES1P13985 223 aa2.33□□□□□ -2.04
HMGB3P19-201ENST00000403971 LIMD2Q9BT23 127 aa2.33□□□□□ -2.04
HMGB3P19-201ENST00000403971 SS18L2Q9UHA2 77 aa2.33□□□□□ -2.04
HMGB3P19-201ENST00000403971 R4GN34 69 aa2.33□□□□□ -2.04
HMGB3P19-201ENST00000403971 V9GYY9 64 aa2.33□□□□□ -2.04
HMGB3P19-201ENST00000403971 ABCA13Q86UQ4 5058 aa2.32□□□□□ -2.04
HMGB3P19-201ENST00000403971 A0A087WSZ3 146 aa2.32□□□□□ -2.04
HMGB3P19-201ENST00000403971 VPS25Q9BRG1 176 aa2.32□□□□□ -2.04
HMGB3P19-201ENST00000403971 A0A0G2JQZ4 141 aa2.31□□□□□ -2.04
HMGB3P19-201ENST00000403971 UBL5Q9BZL1 73 aa2.31□□□□□ -2.04
HMGB3P19-201ENST00000403971 LINC00472Q9H8W2 130 aa2.31□□□□□ -2.04
HMGB3P19-201ENST00000403971 NREPQ16612 68 aa2.3□□□□□ -2.04
HMGB3P19-201ENST00000403971 HRCT1Q6UXD1 115 aa2.3□□□□□ -2.04
HMGB3P19-201ENST00000403971 LINC00846Q9NV44 126 aa2.3□□□□□ -2.04
HMGB3P19-201ENST00000403971 J3KT08 172 aa2.29□□□□□ -2.04
HMGB3P19-201ENST00000403971 C1orf195Q5TG92 126 aa2.29□□□□□ -2.04
HMGB3P19-201ENST00000403971 LINC00643Q86TS7 51 aa2.29□□□□□ -2.04
HMGB3P19-201ENST00000403971 Q96NJ1 140 aa2.29□□□□□ -2.04
HMGB3P19-201ENST00000403971 ATP5EP2Q5VTU8 51 aa2.28□□□□□ -2.04
HMGB3P19-201ENST00000403971 FP248Q71RG6 208 aaPredicted RBP2.28□□□□□ -2.04
HMGB3P19-201ENST00000403971 SIGMAR1Q99720 223 aa2.28□□□□□ -2.04
HMGB3P19-201ENST00000403971 IMUPQ9GZP8 106 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms