RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 A8MWP4 228 aa18.2■□□□□ 0.5
CSNK1E-204ENST00000403904 DSCR10P59022 87 aa18.19■□□□□ 0.5
CSNK1E-204ENST00000403904 NDUFB1O75438 58 aa18.18■□□□□ 0.5
CSNK1E-204ENST00000403904 XP32Q5T750 250 aa18.17■□□□□ 0.5
CSNK1E-204ENST00000403904 IGKV3D-7A0A0C4DH55 119 aa18.16■□□□□ 0.5
CSNK1E-204ENST00000403904 NOTCH2NLQ7Z3S9 236 aa18.15■□□□□ 0.5
CSNK1E-204ENST00000403904 J3QR89 54 aa18.14■□□□□ 0.49
CSNK1E-204ENST00000403904 LINC00313P59037 77 aa18.13■□□□□ 0.49
CSNK1E-204ENST00000403904 K7EQZ3 153 aa18.09■□□□□ 0.49
CSNK1E-204ENST00000403904 PRR15Q8IV56 129 aa18.09■□□□□ 0.49
CSNK1E-204ENST00000403904 UBR4Q5T4S7 5183 aa18.08■□□□□ 0.49
CSNK1E-204ENST00000403904 C8orf87E5RJ46 101 aa18.05■□□□□ 0.48
CSNK1E-204ENST00000403904 Q8N9L7 120 aa18.05■□□□□ 0.48
CSNK1E-204ENST00000403904 C8orf17Q9NRJ1 99 aa18■□□□□ 0.47
CSNK1E-204ENST00000403904 CXCL6P80162 114 aa17.99■□□□□ 0.47
CSNK1E-204ENST00000403904 KRTAP16-1A8MUX0 517 aa17.98■□□□□ 0.47
CSNK1E-204ENST00000403904 K7ERU9 68 aa17.94■□□□□ 0.46
CSNK1E-204ENST00000403904 MMP24-AS1A0A0U1RRL7 71 aa17.91■□□□□ 0.46
CSNK1E-204ENST00000403904 RPL37P61927 97 aaKnown RBP17.91■□□□□ 0.46
CSNK1E-204ENST00000403904 MUC17Q685J3 4493 aa17.91■□□□□ 0.46
CSNK1E-204ENST00000403904 LINC00643Q86TS7 51 aa17.9■□□□□ 0.46
CSNK1E-204ENST00000403904 C20orf166-AS1Q96NR2 134 aa17.89■□□□□ 0.45
CSNK1E-204ENST00000403904 Q75L30 129 aa17.88■□□□□ 0.45
CSNK1E-204ENST00000403904 ATP5EP2Q5VTU8 51 aa17.87■□□□□ 0.45
CSNK1E-204ENST00000403904 A8MUU9 505 aa17.86■□□□□ 0.45
CSNK1E-204ENST00000403904 SEC61BP60468 96 aaKnown RBP17.83■□□□□ 0.45
CSNK1E-204ENST00000403904 hDV103S1A0JD37 113 aa17.81■□□□□ 0.44
CSNK1E-204ENST00000403904 WFDC13Q8IUB5 93 aa17.79■□□□□ 0.44
CSNK1E-204ENST00000403904 PCOTHQ58A44 107 aa17.78■□□□□ 0.44
CSNK1E-204ENST00000403904 TMEM254Q8TBM7 123 aa17.77■□□□□ 0.44
CSNK1E-204ENST00000403904 RNF213Q63HN8 5207 aa17.76■□□□□ 0.43
CSNK1E-204ENST00000403904 CASC2Q6XLA1 102 aa17.74■□□□□ 0.43
CSNK1E-204ENST00000403904 MRPL34Q9BQ48 92 aaKnown RBP17.74■□□□□ 0.43
CSNK1E-204ENST00000403904 Q8N9P0 234 aaPredicted RBP17.74■□□□□ 0.43
CSNK1E-204ENST00000403904 HCG22E2RYF7 251 aa17.73■□□□□ 0.43
CSNK1E-204ENST00000403904 ATP11AUNQ6ZP68 121 aa17.72■□□□□ 0.43
CSNK1E-204ENST00000403904 HIST1H4AP62805 103 aaKnown RBP17.71■□□□□ 0.43
CSNK1E-204ENST00000403904 MUC2Q02817 5179 aa17.67■□□□□ 0.42
CSNK1E-204ENST00000403904 NDUFS5O43920 106 aa17.61■□□□□ 0.41
CSNK1E-204ENST00000403904 A0A087WVE0 104 aa17.58■□□□□ 0.41
CSNK1E-204ENST00000403904 KRTAP4-1Q9BYQ7 146 aa17.57■□□□□ 0.4
CSNK1E-204ENST00000403904 ZCCHC13Q8WW36 166 aaKnown RBP17.52■□□□□ 0.39
CSNK1E-204ENST00000403904 MT-ATP8P03928 68 aa17.51■□□□□ 0.39
CSNK1E-204ENST00000403904 IMUPQ9GZP8 106 aa17.37■□□□□ 0.37
CSNK1E-204ENST00000403904 Q5W150 140 aa17.36■□□□□ 0.37
CSNK1E-204ENST00000403904 TP53AIP1Q9HCN2 124 aa17.31■□□□□ 0.36
CSNK1E-204ENST00000403904 SPINK7P58062 85 aa17.19■□□□□ 0.34
CSNK1E-204ENST00000403904 SCGB1A1P11684 91 aa17.14■□□□□ 0.33
CSNK1E-204ENST00000403904 FAM236AA0A1B0GUQ0 79 aa17.11■□□□□ 0.33
CSNK1E-204ENST00000403904 FAM236BA0A1B0GV22 79 aa17.11■□□□□ 0.33
CSNK1E-204ENST00000403904 UQCRQO14949 82 aa17.11■□□□□ 0.33
CSNK1E-204ENST00000403904 IGKV2D-30A0A075B6S6 120 aa17.1■□□□□ 0.33
CSNK1E-204ENST00000403904 IGKV2-30P06310 120 aa17.1■□□□□ 0.33
CSNK1E-204ENST00000403904 OCR1Q9BZK8 76 aa17.1■□□□□ 0.33
CSNK1E-204ENST00000403904 TRAV22A0A0B4J277 110 aa17.07■□□□□ 0.32
CSNK1E-204ENST00000403904 FAT4Q6V0I7 4981 aa17.07■□□□□ 0.32
CSNK1E-204ENST00000403904 HRES1P13985 223 aa17.03■□□□□ 0.32
CSNK1E-204ENST00000403904 C7orf65Q6ZTY9 151 aa17.02■□□□□ 0.32
CSNK1E-204ENST00000403904 A0A0U1RQV1 116 aa16.99■□□□□ 0.31
CSNK1E-204ENST00000403904 KRTAP19-2Q3LHN2 52 aa16.99■□□□□ 0.31
CSNK1E-204ENST00000403904 H0Y9P7 68 aa16.97■□□□□ 0.31
CSNK1E-204ENST00000403904 MPLKIPQ8TAP9 179 aa16.92■□□□□ 0.3
CSNK1E-204ENST00000403904 ATOX1O00244 68 aa16.89■□□□□ 0.3
CSNK1E-204ENST00000403904 LCE2CQ5TA81 110 aa16.88■□□□□ 0.29
CSNK1E-204ENST00000403904 COX6B2Q6YFQ2 88 aa16.88■□□□□ 0.29
CSNK1E-204ENST00000403904 RBM12B-AS1Q9P1G2 102 aa16.87■□□□□ 0.29
CSNK1E-204ENST00000403904 C5orf47Q569G3 176 aa16.85■□□□□ 0.29
CSNK1E-204ENST00000403904 LOC101927531A0A1B0GV80 90 aa16.84■□□□□ 0.29
CSNK1E-204ENST00000403904 SMIM20Q8N5G0 67 aa16.84■□□□□ 0.29
CSNK1E-204ENST00000403904 MP68P56378 58 aa16.83■□□□□ 0.28
CSNK1E-204ENST00000403904 CYP4F30PQ9H0H9 118 aa16.83■□□□□ 0.28
CSNK1E-204ENST00000403904 LINC00208Q96KT6 92 aa16.81■□□□□ 0.28
CSNK1E-204ENST00000403904 TRAV7A0A075B6U4 112 aa16.8■□□□□ 0.28
CSNK1E-204ENST00000403904 C1orf64Q8NEQ6 169 aa16.8■□□□□ 0.28
CSNK1E-204ENST00000403904 FAM236DA0A1B0GTK5 79 aa16.78■□□□□ 0.28
CSNK1E-204ENST00000403904 FAM236CP0DP71 79 aa16.78■□□□□ 0.28
CSNK1E-204ENST00000403904 C4orf26Q17RF5 130 aa16.71■□□□□ 0.27
CSNK1E-204ENST00000403904 H3BPC8 53 aa16.67■□□□□ 0.26
CSNK1E-204ENST00000403904 FLGP20930 4061 aaPredicted RBP16.65■□□□□ 0.26
CSNK1E-204ENST00000403904 SERP2Q8N6R1 65 aa16.61■□□□□ 0.25
CSNK1E-204ENST00000403904 MT1HP80294 61 aa16.6■□□□□ 0.25
CSNK1E-204ENST00000403904 KLKP1Q107X0 134 aa16.57■□□□□ 0.24
CSNK1E-204ENST00000403904 LCE2AQ5TA79 106 aaPredicted RBP16.57■□□□□ 0.24
CSNK1E-204ENST00000403904 KRTAP3-1Q9BYR8 98 aa16.47■□□□□ 0.23
CSNK1E-204ENST00000403904 H1FX-AS1Q4G0G2 97 aa16.45■□□□□ 0.22
CSNK1E-204ENST00000403904 SNURFQ9Y675 71 aa16.43■□□□□ 0.22
CSNK1E-204ENST00000403904 C20orf197Q8N268 126 aa16.43■□□□□ 0.22
CSNK1E-204ENST00000403904 M0R2T5 61 aa16.39■□□□□ 0.21
CSNK1E-204ENST00000403904 COX7CP15954 63 aa16.38■□□□□ 0.21
CSNK1E-204ENST00000403904 ANAPC13Q9BS18 74 aa16.35■□□□□ 0.21
CSNK1E-204ENST00000403904 A8MUN3 132 aa16.16■□□□□ 0.18
CSNK1E-204ENST00000403904 S4R3F8 94 aa16.14■□□□□ 0.17
CSNK1E-204ENST00000403904 KRTAP10-6P60371 365 aaPredicted RBP16.12■□□□□ 0.17
CSNK1E-204ENST00000403904 LCA10Q71F78 164 aa16.08■□□□□ 0.16
CSNK1E-204ENST00000403904 DMAC1Q96GE9 116 aa16.08■□□□□ 0.16
CSNK1E-204ENST00000403904 LORP23490 312 aaPredicted RBP16.06■□□□□ 0.16
CSNK1E-204ENST00000403904 CYSTM1Q9H1C7 97 aa16.04■□□□□ 0.16
CSNK1E-204ENST00000403904 CCDC179H3BU77 68 aa16.02■□□□□ 0.16
CSNK1E-204ENST00000403904 SPANXA2-OT1Q8N9U9 137 aa15.98■□□□□ 0.15
CSNK1E-204ENST00000403904 NDUFC1O43677 76 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms