RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TRAPPC2P0DI81 140 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 TRAPPC2BP0DI82 140 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 SAA2P0DJI9 122 aaPredicted RBP0.19□□□□□ -2.38
CD47-203ENST00000398258 SNRPGP62308 76 aaKnown RBP0.19□□□□□ -2.38
CD47-203ENST00000398258 SEC11AP67812 179 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 DEFA5Q01523 94 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 Q5BKY6 102 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 LINC01590Q5TEZ4 76 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 SMIM4Q8WVI0 70 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 S100ZQ8WXG8 99 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 ARHGAP5-AS1Q96IT6 56 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 MGST2Q99735 147 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 PRO1933Q9H354 126 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 NXT2Q9NPJ8 142 aaKnown RBP0.19□□□□□ -2.38
CD47-203ENST00000398258 ANK2Q01484 3957 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 MYH7P12883 1935 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 MYH8P13535 1937 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 ABCA13Q86UQ4 5058 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 CACNA1CQ13936 2221 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 RNF213Q63HN8 5207 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 LAMA5O15230 3695 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 A0A096LNI7 61 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 A0A1B0GWA3 101 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 IGLC7A0M8Q6 106 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 FAM24AA6NFZ4 105 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 HMGN4O00479 90 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 S100A8P05109 93 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 SPINK8P0C7L1 97 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 S100A3P33764 101 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 RPL38P63173 70 aaKnown RBP0.18□□□□□ -2.38
CD47-203ENST00000398258 NMSQ5H8A3 153 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 TMEM170BQ5T4T1 132 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 CLPSL2Q6UWE3 100 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 BAGE2Q86Y30 109 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 AMELXQ99217 191 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 SMIM2Q9BVW6 85 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 AP4S1Q9Y587 144 aa0.18□□□□□ -2.38
CD47-203ENST00000398258 GOLGA4Q13439 2230 aaKnown RBP0.18□□□□□ -2.38
CD47-203ENST00000398258 MYH4Q9Y623 1939 aa0.17□□□□□ -2.38
CD47-203ENST00000398258 FAT4Q6V0I7 4981 aa0.17□□□□□ -2.38
CD47-203ENST00000398258 LINC01549A6NIU2 74 aa0.17□□□□□ -2.38
CD47-203ENST00000398258 CPSF4LA6NMK7 179 aaKnown RBP0.17□□□□□ -2.38
CD47-203ENST00000398258 CEBPZOSA8MTT3 80 aa0.17□□□□□ -2.38
CD47-203ENST00000398258 NDUFB1O75438 58 aa0.17□□□□□ -2.38
CD47-203ENST00000398258 MT2AP02795 61 aa0.17□□□□□ -2.38
CD47-203ENST00000398258 SPRR1BP22528 89 aa0.17□□□□□ -2.38
CD47-203ENST00000398258 FCER1GP30273 86 aa0.17□□□□□ -2.38
CD47-203ENST00000398258 GNG4P50150 75 aa0.17□□□□□ -2.38
CD47-203ENST00000398258 GNG11P61952 73 aa0.17□□□□□ -2.38
CD47-203ENST00000398258 Q6JHZ5 121 aa0.17□□□□□ -2.38
CD47-203ENST00000398258 WFDC13Q8IUB5 93 aa0.17□□□□□ -2.38
CD47-203ENST00000398258 SVBPQ8N300 66 aa0.17□□□□□ -2.38
CD47-203ENST00000398258 NMES1Q9C002 83 aa0.17□□□□□ -2.38
CD47-203ENST00000398258 IER3IP1Q9Y5U9 82 aa0.17□□□□□ -2.38
CD47-203ENST00000398258 HERC2O95714 4834 aa0.17□□□□□ -2.38
CD47-203ENST00000398258 HERC1Q15751 4861 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 TRBV6-1A0A0K0K1D8 114 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 UBE2L5PA0A1B0GUS4 154 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 C7orf77A4D0Y5 90 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 GNGT2O14610 69 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 UQCR11O14957 56 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 NDUFC1O43677 76 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 MT1FP04733 61 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 MT1BP07438 61 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 MGPP08493 103 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 IAPPP10997 89 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 IFITM1P13164 125 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 MT1GP13640 62 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 IFI27P40305 119 aaPredicted RBP0.16□□□□□ -2.38
CD47-203ENST00000398258 GNG2P59768 71 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 UBE2L3P68036 154 aaKnown RBP0.16□□□□□ -2.38
CD47-203ENST00000398258 PRLHP81277 87 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 COX17Q14061 63 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 H1FX-AS1Q4G0G2 97 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 RPL39P5Q59GN2 51 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 ENHOQ6UWT2 76 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 SPRR4Q96PI1 79 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 TRGV9Q99603 122 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 C12orf57Q99622 126 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 TOMM7Q9P0U1 55 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 LINC01558Q9Y6Z2 57 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 S4R3F8 94 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 V9GYS6 101 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 MYH6P13533 1939 aa0.16□□□□□ -2.38
CD47-203ENST00000398258 HECTD4Q9Y4D8 3996 aa0.15□□□□□ -2.38
CD47-203ENST00000398258 ANKRD36A6QL64 1941 aa0.15□□□□□ -2.39
CD47-203ENST00000398258 USH2AO75445 5202 aa0.15□□□□□ -2.39
CD47-203ENST00000398258 TRAV22A0A0B4J277 110 aa0.15□□□□□ -2.39
CD47-203ENST00000398258 A8MTW9 85 aa0.15□□□□□ -2.39
CD47-203ENST00000398258 I3L2K1 104 aa0.15□□□□□ -2.39
CD47-203ENST00000398258 I3L3M4 83 aa0.15□□□□□ -2.39
CD47-203ENST00000398258 K7EIM0 57 aa0.15□□□□□ -2.39
CD47-203ENST00000398258 APOC3P02656 99 aa0.15□□□□□ -2.39
CD47-203ENST00000398258 IGLC1P0CG04 106 aa0.15□□□□□ -2.39
CD47-203ENST00000398258 DEFB1P60022 68 aa0.15□□□□□ -2.39
CD47-203ENST00000398258 MRPS10P82664 201 aaKnown RBP0.15□□□□□ -2.39
CD47-203ENST00000398258 WFDC2Q14508 124 aa0.15□□□□□ -2.39
CD47-203ENST00000398258 HMGN3Q15651 99 aa0.15□□□□□ -2.39
CD47-203ENST00000398258 KLK9Q2XQG4 91 aa0.15□□□□□ -2.39
CD47-203ENST00000398258 KRTAP20-2Q3LI61 65 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 195.6 ms