RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 IGKV4-1P06312 121 aa13.89□□□□□ -0.19
U2AF1-203ENST00000398137 XP32Q5T750 250 aa13.89□□□□□ -0.19
U2AF1-203ENST00000398137 ETDBQ3ZM63 59 aa13.85□□□□□ -0.19
U2AF1-203ENST00000398137 KRTAP9-2Q9BYQ4 174 aa13.79□□□□□ -0.2
U2AF1-203ENST00000398137 NREPQ16612 68 aa13.78□□□□□ -0.2
U2AF1-203ENST00000398137 J3KT08 172 aa13.76□□□□□ -0.21
U2AF1-203ENST00000398137 SEC61BP60468 96 aaKnown RBP13.75□□□□□ -0.21
U2AF1-203ENST00000398137 DSCR10P59022 87 aa13.74□□□□□ -0.21
U2AF1-203ENST00000398137 IGHV6-1A0A0B4J1U7 121 aa13.72□□□□□ -0.21
U2AF1-203ENST00000398137 A0A1B0GVX0 72 aa13.69□□□□□ -0.22
U2AF1-203ENST00000398137 Q6ZVQ6 151 aa13.67□□□□□ -0.22
U2AF1-203ENST00000398137 LINC00313P59037 77 aa13.66□□□□□ -0.22
U2AF1-203ENST00000398137 NOTCH2NLQ7Z3S9 236 aa13.66□□□□□ -0.22
U2AF1-203ENST00000398137 LINC00846Q9NV44 126 aa13.66□□□□□ -0.22
U2AF1-203ENST00000398137 RPL37P61927 97 aaKnown RBP13.65□□□□□ -0.22
U2AF1-203ENST00000398137 A8MWP4 228 aa13.64□□□□□ -0.23
U2AF1-203ENST00000398137 NDUFB1O75438 58 aa13.63□□□□□ -0.23
U2AF1-203ENST00000398137 IGKV3D-7A0A0C4DH55 119 aa13.61□□□□□ -0.23
U2AF1-203ENST00000398137 C8orf87E5RJ46 101 aa13.6□□□□□ -0.23
U2AF1-203ENST00000398137 PCOTHQ58A44 107 aa13.6□□□□□ -0.23
U2AF1-203ENST00000398137 UBL5Q9BZL1 73 aa13.6□□□□□ -0.23
U2AF1-203ENST00000398137 BPY2O14599 106 aa13.59□□□□□ -0.23
U2AF1-203ENST00000398137 KRTAP16-1A8MUX0 517 aa13.58□□□□□ -0.24
U2AF1-203ENST00000398137 Q75L30 129 aa13.58□□□□□ -0.24
U2AF1-203ENST00000398137 LCE2CQ5TA81 110 aa13.56□□□□□ -0.24
U2AF1-203ENST00000398137 C20orf166-AS1Q96NR2 134 aa13.56□□□□□ -0.24
U2AF1-203ENST00000398137 KRTAP19-2Q3LHN2 52 aa13.55□□□□□ -0.24
U2AF1-203ENST00000398137 PRR15Q8IV56 129 aa13.54□□□□□ -0.24
U2AF1-203ENST00000398137 A8MUU9 505 aa13.53□□□□□ -0.24
U2AF1-203ENST00000398137 K7EQZ3 153 aa13.52□□□□□ -0.25
U2AF1-203ENST00000398137 C8orf17Q9NRJ1 99 aa13.52□□□□□ -0.25
U2AF1-203ENST00000398137 Q8N9L7 120 aa13.47□□□□□ -0.25
U2AF1-203ENST00000398137 ATP11AUNQ6ZP68 121 aa13.46□□□□□ -0.25
U2AF1-203ENST00000398137 FAM240AA0A1B0GVK7 77 aa13.45□□□□□ -0.26
U2AF1-203ENST00000398137 ACYP1P07311 99 aa13.45□□□□□ -0.26
U2AF1-203ENST00000398137 MMP24-AS1A0A0U1RRL7 71 aa13.43□□□□□ -0.26
U2AF1-203ENST00000398137 MT1HP80294 61 aa13.35□□□□□ -0.27
U2AF1-203ENST00000398137 KRTAP9-6A0A140TA67 174 aa13.34□□□□□ -0.27
U2AF1-203ENST00000398137 hDV103S1A0JD37 113 aa13.34□□□□□ -0.27
U2AF1-203ENST00000398137 CXCL6P80162 114 aa13.34□□□□□ -0.27
U2AF1-203ENST00000398137 Q8N9P0 234 aaPredicted RBP13.34□□□□□ -0.27
U2AF1-203ENST00000398137 TMEM254Q8TBM7 123 aa13.34□□□□□ -0.27
U2AF1-203ENST00000398137 WFDC13Q8IUB5 93 aa13.31□□□□□ -0.28
U2AF1-203ENST00000398137 MRPL34Q9BQ48 92 aaKnown RBP13.31□□□□□ -0.28
U2AF1-203ENST00000398137 J3QR89 54 aa13.27□□□□□ -0.29
U2AF1-203ENST00000398137 CASC2Q6XLA1 102 aa13.27□□□□□ -0.29
U2AF1-203ENST00000398137 ZCCHC13Q8WW36 166 aaKnown RBP13.24□□□□□ -0.29
U2AF1-203ENST00000398137 HCG22E2RYF7 251 aa13.23□□□□□ -0.29
U2AF1-203ENST00000398137 ATP5EP2Q5VTU8 51 aa13.23□□□□□ -0.29
U2AF1-203ENST00000398137 NDUFS5O43920 106 aa13.22□□□□□ -0.29
U2AF1-203ENST00000398137 LINC00643Q86TS7 51 aa13.18□□□□□ -0.3
U2AF1-203ENST00000398137 FLGP20930 4061 aaPredicted RBP13.17□□□□□ -0.3
U2AF1-203ENST00000398137 LORP23490 312 aaPredicted RBP13.12□□□□□ -0.31
U2AF1-203ENST00000398137 HIST1H4AP62805 103 aaKnown RBP13.1□□□□□ -0.31
U2AF1-203ENST00000398137 KRTAP10-6P60371 365 aaPredicted RBP13.09□□□□□ -0.31
U2AF1-203ENST00000398137 FSIP2Q5CZC0 6907 aa13.06□□□□□ -0.32
U2AF1-203ENST00000398137 K7ERU9 68 aa13.04□□□□□ -0.32
U2AF1-203ENST00000398137 Q5W150 140 aa13.01□□□□□ -0.33
U2AF1-203ENST00000398137 A0A087WVE0 104 aa13□□□□□ -0.33
U2AF1-203ENST00000398137 SPINK7P58062 85 aa13□□□□□ -0.33
U2AF1-203ENST00000398137 COX6B2Q6YFQ2 88 aa12.99□□□□□ -0.33
U2AF1-203ENST00000398137 CRCT1Q9UGL9 99 aa12.98□□□□□ -0.33
U2AF1-203ENST00000398137 HRES1P13985 223 aa12.95□□□□□ -0.34
U2AF1-203ENST00000398137 M0R2T5 61 aa12.93□□□□□ -0.34
U2AF1-203ENST00000398137 TP53AIP1Q9HCN2 124 aa12.91□□□□□ -0.34
U2AF1-203ENST00000398137 IGKV2D-30A0A075B6S6 120 aa12.87□□□□□ -0.35
U2AF1-203ENST00000398137 IGKV2-30P06310 120 aa12.87□□□□□ -0.35
U2AF1-203ENST00000398137 MPLKIPQ8TAP9 179 aa12.86□□□□□ -0.35
U2AF1-203ENST00000398137 RBM12B-AS1Q9P1G2 102 aa12.84□□□□□ -0.35
U2AF1-203ENST00000398137 C7orf65Q6ZTY9 151 aa12.83□□□□□ -0.36
U2AF1-203ENST00000398137 FAM236DA0A1B0GTK5 79 aa12.81□□□□□ -0.36
U2AF1-203ENST00000398137 MT-ATP8P03928 68 aa12.81□□□□□ -0.36
U2AF1-203ENST00000398137 FAM236CP0DP71 79 aa12.81□□□□□ -0.36
U2AF1-203ENST00000398137 TRAV22A0A0B4J277 110 aa12.73□□□□□ -0.37
U2AF1-203ENST00000398137 UQCRQO14949 82 aa12.73□□□□□ -0.37
U2AF1-203ENST00000398137 IMUPQ9GZP8 106 aa12.71□□□□□ -0.37
U2AF1-203ENST00000398137 OCR1Q9BZK8 76 aa12.65□□□□□ -0.38
U2AF1-203ENST00000398137 H0Y9P7 68 aa12.64□□□□□ -0.39
U2AF1-203ENST00000398137 KRTAP9-8Q9BYQ0 159 aa12.64□□□□□ -0.39
U2AF1-203ENST00000398137 SCGB1A1P11684 91 aa12.62□□□□□ -0.39
U2AF1-203ENST00000398137 LOC101927531A0A1B0GV80 90 aa12.58□□□□□ -0.4
U2AF1-203ENST00000398137 ATOX1O00244 68 aa12.58□□□□□ -0.4
U2AF1-203ENST00000398137 C4orf26Q17RF5 130 aa12.58□□□□□ -0.4
U2AF1-203ENST00000398137 CYP4F30PQ9H0H9 118 aa12.57□□□□□ -0.4
U2AF1-203ENST00000398137 FAM236AA0A1B0GUQ0 79 aa12.56□□□□□ -0.4
U2AF1-203ENST00000398137 FAM236BA0A1B0GV22 79 aa12.56□□□□□ -0.4
U2AF1-203ENST00000398137 MP68P56378 58 aa12.49□□□□□ -0.41
U2AF1-203ENST00000398137 C1orf64Q8NEQ6 169 aa12.49□□□□□ -0.41
U2AF1-203ENST00000398137 LINC00208Q96KT6 92 aa12.48□□□□□ -0.41
U2AF1-203ENST00000398137 H1FX-AS1Q4G0G2 97 aa12.47□□□□□ -0.41
U2AF1-203ENST00000398137 C5orf47Q569G3 176 aa12.46□□□□□ -0.41
U2AF1-203ENST00000398137 MT2AP02795 61 aa12.42□□□□□ -0.42
U2AF1-203ENST00000398137 USH2AO75445 5202 aa12.41□□□□□ -0.42
U2AF1-203ENST00000398137 SMIM20Q8N5G0 67 aa12.39□□□□□ -0.43
U2AF1-203ENST00000398137 KRTAP3-1Q9BYR8 98 aa12.38□□□□□ -0.43
U2AF1-203ENST00000398137 TRAV7A0A075B6U4 112 aa12.37□□□□□ -0.43
U2AF1-203ENST00000398137 H3BPC8 53 aa12.36□□□□□ -0.43
U2AF1-203ENST00000398137 SSPOA2VEC9 5147 aa12.35□□□□□ -0.43
U2AF1-203ENST00000398137 MT1FP04733 61 aa12.34□□□□□ -0.43
U2AF1-203ENST00000398137 KLKP1Q107X0 134 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms